RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 NUDCQ9Y266 331 aa19.76■□□□□ 0.75
CLN6-215ENST00000636674 PREX2Q70Z35 1606 aa19.75■□□□□ 0.75
CLN6-215ENST00000636674 KIF15Q9NS87 1388 aa19.75■□□□□ 0.75
CLN6-215ENST00000636674 PLEKHD1A6NEE1 506 aa19.75■□□□□ 0.75
CLN6-215ENST00000636674 LRPPRCP42704 1394 aaKnown RBP19.72■□□□□ 0.75
CLN6-215ENST00000636674 ZCCHC11Q5TAX3 1644 aaKnown RBP19.72■□□□□ 0.75
CLN6-215ENST00000636674 TRPM1Q7Z4N2 1603 aa19.72■□□□□ 0.75
CLN6-215ENST00000636674 DIP2BQ9P265 1576 aa19.72■□□□□ 0.75
CLN6-215ENST00000636674 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
CLN6-215ENST00000636674 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
CLN6-215ENST00000636674 CCDC141Q6ZP82 1450 aa19.71■□□□□ 0.75
CLN6-215ENST00000636674 SAMD9LQ8IVG5 1584 aa19.71■□□□□ 0.75
CLN6-215ENST00000636674 PNISRQ8TF01 805 aaKnown RBP19.71■□□□□ 0.75
CLN6-215ENST00000636674 MAST1Q9Y2H9 1570 aa19.71■□□□□ 0.74
CLN6-215ENST00000636674 LAMC1P11047 1609 aa19.7■□□□□ 0.74
CLN6-215ENST00000636674 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
CLN6-215ENST00000636674 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
CLN6-215ENST00000636674 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
CLN6-215ENST00000636674 UNC13BO14795 1591 aa19.69■□□□□ 0.74
CLN6-215ENST00000636674 CARD11Q9BXL7 1154 aa19.69■□□□□ 0.74
CLN6-215ENST00000636674 TSPY4P0CV99 314 aa19.68■□□□□ 0.74
CLN6-215ENST00000636674 TSPY10P0CW01 314 aa19.68■□□□□ 0.74
CLN6-215ENST00000636674 ASXL2Q76L83 1435 aa19.66■□□□□ 0.74
CLN6-215ENST00000636674 RALBP1Q15311 655 aa19.65■□□□□ 0.74
CLN6-215ENST00000636674 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
CLN6-215ENST00000636674 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
CLN6-215ENST00000636674 RSPH4AQ5TD94 716 aa19.63■□□□□ 0.73
CLN6-215ENST00000636674 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
CLN6-215ENST00000636674 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
CLN6-215ENST00000636674 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
CLN6-215ENST00000636674 GPRASP1Q5JY77 1395 aa19.62■□□□□ 0.73
CLN6-215ENST00000636674 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
CLN6-215ENST00000636674 ST20-MTHFSA0A0A6YYL1 179 aa19.61■□□□□ 0.73
CLN6-215ENST00000636674 IQGAP3Q86VI3 1631 aa19.61■□□□□ 0.73
CLN6-215ENST00000636674 GLI2P10070 1586 aa19.61■□□□□ 0.73
CLN6-215ENST00000636674 FAM69CQ0P6D2 419 aa19.61■□□□□ 0.73
CLN6-215ENST00000636674 ZMYM4Q5VZL5 1548 aa19.6■□□□□ 0.73
CLN6-215ENST00000636674 EIF2AK4Q9P2K8 1649 aaKnown RBP19.6■□□□□ 0.73
CLN6-215ENST00000636674 PARD3Q8TEW0 1356 aa19.59■□□□□ 0.73
CLN6-215ENST00000636674 PRDM15P57071 1507 aaPredicted RBP19.59■□□□□ 0.73
CLN6-215ENST00000636674 CCDC144AA2RUR9 1427 aa19.58■□□□□ 0.73
CLN6-215ENST00000636674 DCAF11Q8TEB1 546 aa19.58■□□□□ 0.73
CLN6-215ENST00000636674 MYO5CQ9NQX4 1742 aa19.58■□□□□ 0.72
CLN6-215ENST00000636674 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.72
CLN6-215ENST00000636674 INSRP06213 1382 aa19.58■□□□□ 0.72
CLN6-215ENST00000636674 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.72
CLN6-215ENST00000636674 SYCP2Q9BX26 1530 aa19.57■□□□□ 0.72
CLN6-215ENST00000636674 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
CLN6-215ENST00000636674 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
CLN6-215ENST00000636674 A2MP01023 1474 aa19.56■□□□□ 0.72
CLN6-215ENST00000636674 MAGI2Q86UL8 1455 aa19.56■□□□□ 0.72
CLN6-215ENST00000636674 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
CLN6-215ENST00000636674 CCDC136Q96JN2 1154 aa19.55■□□□□ 0.72
CLN6-215ENST00000636674 ATP10AO60312 1499 aa19.55■□□□□ 0.72
CLN6-215ENST00000636674 PLA2R1Q13018 1463 aa19.55■□□□□ 0.72
CLN6-215ENST00000636674 TSPOAP1O95153 1857 aa19.55■□□□□ 0.72
CLN6-215ENST00000636674 RNF17Q9BXT8 1623 aaKnown RBP19.53■□□□□ 0.72
CLN6-215ENST00000636674 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
CLN6-215ENST00000636674 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
CLN6-215ENST00000636674 KDM2AQ9Y2K7 1162 aa19.53■□□□□ 0.72
CLN6-215ENST00000636674 WASHC2CQ9Y4E1 1318 aa19.52■□□□□ 0.72
CLN6-215ENST00000636674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.723e-7■■■□□ 19.1
CLN6-215ENST00000636674 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
CLN6-215ENST00000636674 PPRC1Q5VV67 1664 aaKnown RBP19.51■□□□□ 0.71
CLN6-215ENST00000636674 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
CLN6-215ENST00000636674 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
CLN6-215ENST00000636674 PDE3BQ13370 1112 aa19.5■□□□□ 0.71
CLN6-215ENST00000636674 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
CLN6-215ENST00000636674 DUOX2Q9NRD8 1548 aa19.5■□□□□ 0.71
CLN6-215ENST00000636674 PER1O15534 1290 aaPredicted RBP19.48■□□□□ 0.71
CLN6-215ENST00000636674 RRP1P56182 461 aaKnown RBP19.47■□□□□ 0.71
CLN6-215ENST00000636674 BLMP54132 1417 aaPredicted RBP19.47■□□□□ 0.71
CLN6-215ENST00000636674 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
CLN6-215ENST00000636674 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
CLN6-215ENST00000636674 TESK2Q96S53 571 aa19.44■□□□□ 0.7
CLN6-215ENST00000636674 DISP3Q9P2K9 1392 aa19.42■□□□□ 0.7
CLN6-215ENST00000636674 RCAN3Q9UKA8 241 aa19.42■□□□□ 0.7
CLN6-215ENST00000636674 NBPF1Q3BBV0 1214 aa19.41■□□□□ 0.7
CLN6-215ENST00000636674 ABCA9Q8IUA7 1624 aa19.41■□□□□ 0.7
CLN6-215ENST00000636674 IQGAP1P46940 1657 aa19.41■□□□□ 0.7
CLN6-215ENST00000636674 ANP32AP39687 249 aaKnown RBP19.39■□□□□ 0.69
CLN6-215ENST00000636674 MADDQ8WXG6 1647 aa19.39■□□□□ 0.69
CLN6-215ENST00000636674 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
CLN6-215ENST00000636674 ABCC1P33527 1531 aa19.38■□□□□ 0.69
CLN6-215ENST00000636674 IPO9Q96P70 1041 aaKnown RBP19.37■□□□□ 0.69
CLN6-215ENST00000636674 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
CLN6-215ENST00000636674 CEP152O94986 1710 aa19.35■□□□□ 0.69
CLN6-215ENST00000636674 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
CLN6-215ENST00000636674 TMF1P82094 1093 aa19.35■□□□□ 0.69
CLN6-215ENST00000636674 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
CLN6-215ENST00000636674 PLCH2O75038 1416 aa19.35■□□□□ 0.69
CLN6-215ENST00000636674 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
CLN6-215ENST00000636674 SENP3-EIF4A1A0A087X0R7 540 aa19.34■□□□□ 0.69
CLN6-215ENST00000636674 TRPM2O94759 1503 aa19.34■□□□□ 0.69
CLN6-215ENST00000636674 SYNMO15061 1565 aa19.33■□□□□ 0.69
CLN6-215ENST00000636674 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.68
CLN6-215ENST00000636674 DEPDC5O75140 1603 aa19.32■□□□□ 0.68
CLN6-215ENST00000636674 PANK3Q9H999 370 aa19.31■□□□□ 0.68
CLN6-215ENST00000636674 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
CLN6-215ENST00000636674 MS4A1P11836 297 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms