RNA–Protein interactions for RNA: ENST00000636518.1

LRRK2-208, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 2,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-208ENST00000636518 GOLIM4O00461 696 aa7.44□□□□□ -1.22
LRRK2-208ENST00000636518 ZNF500O60304 480 aaPredicted RBP7.44□□□□□ -1.22
LRRK2-208ENST00000636518 TSPYL1Q9H0U9 437 aa7.44□□□□□ -1.22
LRRK2-208ENST00000636518 IRX5P78411 483 aaPredicted RBP7.43□□□□□ -1.22
LRRK2-208ENST00000636518 NBPF10Q6P3W6 841 aaKnown RBP7.43□□□□□ -1.22
LRRK2-208ENST00000636518 TRHP20396 242 aaPredicted RBP7.42□□□□□ -1.22
LRRK2-208ENST00000636518 EXOC8Q8IYI6 725 aa7.42□□□□□ -1.22
LRRK2-208ENST00000636518 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
LRRK2-208ENST00000636518 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
LRRK2-208ENST00000636518 NBPF5PQ86XG9 351 aaPredicted RBP7.42□□□□□ -1.22
LRRK2-208ENST00000636518 MPNDQ8N594 471 aa7.42□□□□□ -1.22
LRRK2-208ENST00000636518 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
LRRK2-208ENST00000636518 KDM4AO75164 1064 aa7.41□□□□□ -1.22
LRRK2-208ENST00000636518 ARID4AP29374 1257 aaPredicted RBP7.41□□□□□ -1.22
LRRK2-208ENST00000636518 POTEHQ6S545 545 aa7.41□□□□□ -1.22
LRRK2-208ENST00000636518 TSHZ1Q6ZSZ6 1077 aa7.41□□□□□ -1.22
LRRK2-208ENST00000636518 CCDC94Q9BW85 323 aaPredicted RBP7.41□□□□□ -1.22
LRRK2-208ENST00000636518 EFCC1Q9HA90 598 aa7.41□□□□□ -1.22
LRRK2-208ENST00000636518 RBM28Q9NW13 759 aaKnown RBP7.41□□□□□ -1.22
LRRK2-208ENST00000636518 RINLQ6ZS11 566 aa7.41□□□□□ -1.22
LRRK2-208ENST00000636518 CCDC96Q2M329 555 aa7.4□□□□□ -1.22
LRRK2-208ENST00000636518 ESPNB1AK53 854 aa7.4□□□□□ -1.23
LRRK2-208ENST00000636518 PRR29P0C7W0 189 aa7.4□□□□□ -1.23
LRRK2-208ENST00000636518 ZKSCAN8Q15776 578 aaPredicted RBP7.4□□□□□ -1.23
LRRK2-208ENST00000636518 KIAA1211Q6ZU35 1233 aa7.39□□□□□ -1.23
LRRK2-208ENST00000636518 ZNF428Q96B54 188 aa7.39□□□□□ -1.23
LRRK2-208ENST00000636518 CEP83Q9Y592 693 aa7.39□□□□□ -1.23
LRRK2-208ENST00000636518 CGNQ9P2M7 1197 aaKnown RBP7.39□□□□□ -1.23
LRRK2-208ENST00000636518 NRDCO43847 1150 aa7.38□□□□□ -1.23
LRRK2-208ENST00000636518 RIPK4P57078 832 aa7.38□□□□□ -1.23
LRRK2-208ENST00000636518 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
LRRK2-208ENST00000636518 RNF217Q8TC41 542 aa7.38□□□□□ -1.23
LRRK2-208ENST00000636518 CHMP4CQ96CF2 233 aa7.38□□□□□ -1.23
LRRK2-208ENST00000636518 MYCBPQ99417 103 aaPredicted RBP7.38□□□□□ -1.23
LRRK2-208ENST00000636518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.23
LRRK2-208ENST00000636518 FAM13BQ9NYF5 915 aa7.38□□□□□ -1.23
LRRK2-208ENST00000636518 ZCCHC6Q5VYS8 1495 aaKnown RBP7.37□□□□□ -1.23
LRRK2-208ENST00000636518 LOC102724159A0A0B4J2E5 919 aa7.37□□□□□ -1.23
LRRK2-208ENST00000636518 PWP2Q15269 919 aaKnown RBP7.37□□□□□ -1.23
LRRK2-208ENST00000636518 SGSM3Q96HU1 749 aa7.37□□□□□ -1.23
LRRK2-208ENST00000636518 ZNF219Q9P2Y4 722 aaPredicted RBP7.37□□□□□ -1.23
LRRK2-208ENST00000636518 CCDC172P0C7W6 258 aa7.36□□□□□ -1.23
LRRK2-208ENST00000636518 SETDB1Q15047 1291 aa7.36□□□□□ -1.23
LRRK2-208ENST00000636518 EEA1Q15075 1411 aa7.36□□□□□ -1.23
LRRK2-208ENST00000636518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.36□□□□□ -1.23
LRRK2-208ENST00000636518 MRVI1Q9Y6F6 885 aa7.36□□□□□ -1.23
LRRK2-208ENST00000636518 RAD21O60216 631 aa7.35□□□□□ -1.23
LRRK2-208ENST00000636518 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
LRRK2-208ENST00000636518 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.35□□□□□ -1.23
LRRK2-208ENST00000636518 DYNC1I1O14576 645 aa7.35□□□□□ -1.23
LRRK2-208ENST00000636518 KCNJ4P48050 445 aa7.35□□□□□ -1.23
LRRK2-208ENST00000636518 HDAC1Q13547 482 aaPredicted RBP7.35□□□□□ -1.23
LRRK2-208ENST00000636518 RGL3Q3MIN7 710 aa7.35□□□□□ -1.23
LRRK2-208ENST00000636518 SPTY2D1Q68D10 685 aaPredicted RBP7.35□□□□□ -1.23
LRRK2-208ENST00000636518 ARMCX6Q7L4S7 300 aa7.35□□□□□ -1.23
LRRK2-208ENST00000636518 ZNF513Q8N8E2 541 aaPredicted RBP7.35□□□□□ -1.23
LRRK2-208ENST00000636518 ZBTB12Q9Y330 459 aaPredicted RBP7.35□□□□□ -1.23
LRRK2-208ENST00000636518 EP400NLQ6ZTU2 488 aa7.34□□□□□ -1.23
LRRK2-208ENST00000636518 CCDC66A2RUB6 948 aa7.34□□□□□ -1.24
LRRK2-208ENST00000636518 BRPF1P55201 1214 aaPredicted RBP7.34□□□□□ -1.24
LRRK2-208ENST00000636518 MTA1Q13330 715 aa7.34□□□□□ -1.24
LRRK2-208ENST00000636518 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.24
LRRK2-208ENST00000636518 SMC4Q9NTJ3 1288 aa7.34□□□□□ -1.24
LRRK2-208ENST00000636518 SPDYE4A6NLX3 237 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 OFD1O75665 1012 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 CALRP27797 417 aaKnown RBP7.33□□□□□ -1.24
LRRK2-208ENST00000636518 FOXD4L6Q3SYB3 417 aaPredicted RBP7.33□□□□□ -1.24
LRRK2-208ENST00000636518 FOXD4L3Q6VB84 417 aaPredicted RBP7.33□□□□□ -1.24
LRRK2-208ENST00000636518 ANKRD23Q86SG2 305 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 TMC1Q8TDI8 760 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 NCAPGQ9BPX3 1015 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 IFNLR1Q8IU57 520 aaPredicted RBP7.33□□□□□ -1.24
LRRK2-208ENST00000636518 KCTD17Q8N5Z5 321 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 STK26Q9P289 416 aa7.33□□□□□ -1.24
LRRK2-208ENST00000636518 CT47A1Q5JQC4 288 aaPredicted RBP7.32□□□□□ -1.24
LRRK2-208ENST00000636518 MKL1Q969V6 931 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 TRIM6-TRIM34B2RNG4 842 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 MYBPC2Q14324 1141 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 CTR9Q6PD62 1173 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 ITFG2Q969R8 447 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 TIGD1Q96MW7 591 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
LRRK2-208ENST00000636518 TULP2O00295 520 aa7.31□□□□□ -1.24
LRRK2-208ENST00000636518 KIF1CO43896 1103 aaKnown RBP7.31□□□□□ -1.24
LRRK2-208ENST00000636518 CACNB1Q02641 598 aaPredicted RBP7.31□□□□□ -1.24
LRRK2-208ENST00000636518 KIF3AQ9Y496 699 aa7.31□□□□□ -1.24
LRRK2-208ENST00000636518 FAM210AQ96ND0 272 aa7.3□□□□□ -1.24
LRRK2-208ENST00000636518 PAIP2Q9BPZ3 127 aaKnown RBP7.3□□□□□ -1.24
LRRK2-208ENST00000636518 MTMR7Q9Y216 660 aa7.3□□□□□ -1.24
LRRK2-208ENST00000636518 BAZ1BQ9UIG0 1483 aaKnown RBP7.3□□□□□ -1.24
LRRK2-208ENST00000636518 ZNF853P0CG23 659 aa7.3□□□□□ -1.24
LRRK2-208ENST00000636518 KIF16BQ96L93 1317 aa7.3□□□□□ -1.24
LRRK2-208ENST00000636518 CCER2I3L3R5 266 aa7.29□□□□□ -1.24
LRRK2-208ENST00000636518 POLD1P28340 1107 aa7.29□□□□□ -1.24
LRRK2-208ENST00000636518 MNS1Q8NEH6 495 aa7.29□□□□□ -1.24
LRRK2-208ENST00000636518 SIRT1Q96EB6 747 aa7.29□□□□□ -1.24
LRRK2-208ENST00000636518 DONSONQ9NYP3 566 aa7.29□□□□□ -1.24
LRRK2-208ENST00000636518 XRCC6P12956 609 aaKnown RBP eCLIP7.28□□□□□ -1.24
LRRK2-208ENST00000636518 VASPP50552 380 aaPredicted RBP7.28□□□□□ -1.24
LRRK2-208ENST00000636518 MFAP1P55081 439 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms