RNA–Protein interactions for RNA: ENST00000636518.1

LRRK2-208, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 2,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-208ENST00000636518 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
LRRK2-208ENST00000636518 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
LRRK2-208ENST00000636518 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
LRRK2-208ENST00000636518 MYT1Q01538 1121 aa10.9□□□□□ -0.66
LRRK2-208ENST00000636518 TTBK1Q5TCY1 1321 aaPredicted RBP10.6□□□□□ -0.71
LRRK2-208ENST00000636518 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
LRRK2-208ENST00000636518 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
LRRK2-208ENST00000636518 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
LRRK2-208ENST00000636518 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
LRRK2-208ENST00000636518 APLP2Q06481 763 aa10.08□□□□□ -0.8
LRRK2-208ENST00000636518 POTEDQ86YR6 584 aa9.95□□□□□ -0.82
LRRK2-208ENST00000636518 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
LRRK2-208ENST00000636518 BCL11AQ9H165 835 aa9.7□□□□□ -0.86
LRRK2-208ENST00000636518 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
LRRK2-208ENST00000636518 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
LRRK2-208ENST00000636518 FAM9AQ8IZU1 332 aaPredicted RBP9.51□□□□□ -0.89
LRRK2-208ENST00000636518 EIF5BO60841 1220 aaKnown RBP9.49□□□□□ -0.89
LRRK2-208ENST00000636518 HRCP23327 699 aa9.49□□□□□ -0.89
LRRK2-208ENST00000636518 SCAF1Q9H7N4 1312 aaKnown RBP9.43□□□□□ -0.9
LRRK2-208ENST00000636518 ADRA2BP18089 450 aa9.38□□□□□ -0.91
LRRK2-208ENST00000636518 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
LRRK2-208ENST00000636518 NCBP3Q53F19 620 aaKnown RBP9.26□□□□□ -0.93
LRRK2-208ENST00000636518 PPP6R1Q9UPN7 881 aa9.23□□□□□ -0.93
LRRK2-208ENST00000636518 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
LRRK2-208ENST00000636518 KCNA4P22459 653 aa9.18□□□□□ -0.94
LRRK2-208ENST00000636518 UBE2Q2Q8WVN8 375 aa9.13□□□□□ -0.95
LRRK2-208ENST00000636518 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
LRRK2-208ENST00000636518 RANGAP1P46060 587 aaPredicted RBP9.11□□□□□ -0.95
LRRK2-208ENST00000636518 ARXQ96QS3 562 aa9.11□□□□□ -0.95
LRRK2-208ENST00000636518 ANP32EQ9BTT0 268 aa9.09□□□□□ -0.95
LRRK2-208ENST00000636518 FOXD1Q16676 465 aa9.06□□□□□ -0.96
LRRK2-208ENST00000636518 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
LRRK2-208ENST00000636518 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
LRRK2-208ENST00000636518 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
LRRK2-208ENST00000636518 PKNOX2Q96KN3 472 aa8.91□□□□□ -0.98
LRRK2-208ENST00000636518 KLHL34Q8N239 644 aa8.9□□□□□ -0.99
LRRK2-208ENST00000636518 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.99
LRRK2-208ENST00000636518 ANO8Q9HCE9 1232 aaPredicted RBP8.9□□□□□ -0.99
LRRK2-208ENST00000636518 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.99
LRRK2-208ENST00000636518 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
LRRK2-208ENST00000636518 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
LRRK2-208ENST00000636518 NEFLP07196 543 aa8.83□□□□□ -1
LRRK2-208ENST00000636518 ZEB1P37275 1124 aaPredicted RBP8.8□□□□□ -1
LRRK2-208ENST00000636518 NEUROD1Q13562 356 aa8.8□□□□□ -1
LRRK2-208ENST00000636518 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
LRRK2-208ENST00000636518 HOMEZQ8IX15 550 aa8.78□□□□□ -1
LRRK2-208ENST00000636518 ERICH6BQ5W0A0 696 aa8.75□□□□□ -1.01
LRRK2-208ENST00000636518 PDE4CQ08493 712 aa8.74□□□□□ -1.01
LRRK2-208ENST00000636518 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
LRRK2-208ENST00000636518 SLC4A1APQ9BWU0 796 aaKnown RBP8.69□□□□□ -1.02
LRRK2-208ENST00000636518 MYT1LQ9UL68 1186 aa8.68□□□□□ -1.02
LRRK2-208ENST00000636518 PPP4R3CPQ6ZMV5 832 aa8.68□□□□□ -1.02
LRRK2-208ENST00000636518 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
LRRK2-208ENST00000636518 PCGF6Q9BYE7 350 aa8.66□□□□□ -1.02
LRRK2-208ENST00000636518 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
LRRK2-208ENST00000636518 PIAS4Q8N2W9 510 aaPredicted RBP8.64□□□□□ -1.03
LRRK2-208ENST00000636518 TAF7LQ5H9L4 462 aa8.61□□□□□ -1.03
LRRK2-208ENST00000636518 FGD1P98174 961 aa8.6□□□□□ -1.03
LRRK2-208ENST00000636518 CCDC136Q96JN2 1154 aa8.57□□□□□ -1.04
LRRK2-208ENST00000636518 NPM2Q86SE8 214 aaKnown RBP8.55□□□□□ -1.04
LRRK2-208ENST00000636518 ZBTB22O15209 634 aa8.54□□□□□ -1.04
LRRK2-208ENST00000636518 GLIPR1L2Q4G1C9 344 aa8.53□□□□□ -1.04
LRRK2-208ENST00000636518 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
LRRK2-208ENST00000636518 CLSPNQ9HAW4 1339 aa8.53□□□□□ -1.04
LRRK2-208ENST00000636518 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
LRRK2-208ENST00000636518 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
LRRK2-208ENST00000636518 BRD2P25440 801 aaKnown RBP8.47□□□□□ -1.05
LRRK2-208ENST00000636518 AAMPQ13685 434 aa8.47□□□□□ -1.05
LRRK2-208ENST00000636518 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
LRRK2-208ENST00000636518 CHMP4AQ9BY43 222 aa8.45□□□□□ -1.06
LRRK2-208ENST00000636518 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
LRRK2-208ENST00000636518 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
LRRK2-208ENST00000636518 A0A0U1RQG5 324 aaPredicted RBP8.42□□□□□ -1.06
LRRK2-208ENST00000636518 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
LRRK2-208ENST00000636518 ZMYND15Q9H091 742 aa8.41□□□□□ -1.06
LRRK2-208ENST00000636518 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
LRRK2-208ENST00000636518 FBXO3Q9UK99 471 aa8.4□□□□□ -1.06
LRRK2-208ENST00000636518 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.07
LRRK2-208ENST00000636518 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
LRRK2-208ENST00000636518 DCAF8L2P0C7V8 631 aa8.38□□□□□ -1.07
LRRK2-208ENST00000636518 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
LRRK2-208ENST00000636518 DHX37Q8IY37 1157 aaKnown RBP8.37□□□□□ -1.07
LRRK2-208ENST00000636518 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
LRRK2-208ENST00000636518 HAP1P54257 671 aaPredicted RBP8.35□□□□□ -1.07
LRRK2-208ENST00000636518 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
LRRK2-208ENST00000636518 LOC105371045A0A1W2PR82 267 aa8.34□□□□□ -1.07
LRRK2-208ENST00000636518 CCDC180Q9P1Z9 1646 aa8.33□□□□□ -1.08
LRRK2-208ENST00000636518 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
LRRK2-208ENST00000636518 CNKSR2Q8WXI2 1034 aa8.31□□□□□ -1.08
LRRK2-208ENST00000636518 VSIG10Q8N0Z9 540 aa8.3□□□□□ -1.08
LRRK2-208ENST00000636518 NAP1L5Q96NT1 182 aaPredicted RBP8.3□□□□□ -1.08
LRRK2-208ENST00000636518 CDK11BP21127 795 aaKnown RBP8.29□□□□□ -1.08
LRRK2-208ENST00000636518 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
LRRK2-208ENST00000636518 BCANQ96GW7 911 aa8.29□□□□□ -1.08
LRRK2-208ENST00000636518 PAXIP1Q6ZW49 1069 aaPredicted RBP8.28□□□□□ -1.08
LRRK2-208ENST00000636518 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.08
LRRK2-208ENST00000636518 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
LRRK2-208ENST00000636518 DIEXFQ68CQ4 756 aaKnown RBP8.27□□□□□ -1.09
LRRK2-208ENST00000636518 MAPK8IP2Q13387 824 aaPredicted RBP8.26□□□□□ -1.09
LRRK2-208ENST00000636518 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms