RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 CNKSR2Q8WXI2 1034 aa7.91□□□□□ -1.14
GABRB3-218ENST00000635994 TOP2BQ02880 1626 aa7.91□□□□□ -1.14
GABRB3-218ENST00000635994 GGT6Q6P531 493 aa7.91□□□□□ -1.14
GABRB3-218ENST00000635994 TPRNQ4KMQ1 711 aa7.91□□□□□ -1.14
GABRB3-218ENST00000635994 SOX12O15370 315 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 TPM3P06753 285 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 CCDC18Q5T9S5 1454 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 WDR62O43379 1518 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 PRDM2Q13029 1718 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 SMC4Q9NTJ3 1288 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 IGF1RP08069 1367 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 RSPH4AQ5TD94 716 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
GABRB3-218ENST00000635994 MSNP26038 577 aaKnown RBP7.9□□□□□ -1.15
GABRB3-218ENST00000635994 NGDNQ8NEJ9 315 aaKnown RBP7.89□□□□□ -1.15
GABRB3-218ENST00000635994 ABCA10Q8WWZ4 1543 aa7.89□□□□□ -1.15
GABRB3-218ENST00000635994 TPM2P07951 284 aa7.89□□□□□ -1.15
GABRB3-218ENST00000635994 GBP4Q96PP9 640 aa7.89□□□□□ -1.15
GABRB3-218ENST00000635994 FHOD3Q2V2M9 1422 aa7.89□□□□□ -1.15
GABRB3-218ENST00000635994 MEX3CQ5U5Q3 659 aaKnown RBP7.89□□□□□ -1.15
GABRB3-218ENST00000635994 VPS53Q5VIR6 699 aa7.89□□□□□ -1.15
GABRB3-218ENST00000635994 CHMP3Q9Y3E7 222 aa7.89□□□□□ -1.15
GABRB3-218ENST00000635994 CCDC47Q96A33 483 aaKnown RBP7.88□□□□□ -1.15
GABRB3-218ENST00000635994 RWDD1Q9H446 243 aaPredicted RBP7.88□□□□□ -1.15
GABRB3-218ENST00000635994 RGS3P49796 1198 aa7.88□□□□□ -1.15
GABRB3-218ENST00000635994 AKAP17AQ02040 695 aaKnown RBP7.87□□□□□ -1.15
GABRB3-218ENST00000635994 PPP4R2Q9NY27 417 aa7.87□□□□□ -1.15
GABRB3-218ENST00000635994 TSR1Q2NL82 804 aaKnown RBP7.87□□□□□ -1.15
GABRB3-218ENST00000635994 CPLX2Q6PUV4 134 aaKnown RBP7.87□□□□□ -1.15
GABRB3-218ENST00000635994 DCAF11Q8TEB1 546 aa7.87□□□□□ -1.15
GABRB3-218ENST00000635994 EVA1CP58658 441 aa7.87□□□□□ -1.15
GABRB3-218ENST00000635994 AMPHP49418 695 aa7.86□□□□□ -1.15
GABRB3-218ENST00000635994 GRIN2AQ12879 1464 aa7.86□□□□□ -1.15
GABRB3-218ENST00000635994 MSH5O43196 834 aa7.86□□□□□ -1.15
GABRB3-218ENST00000635994 CUL7Q14999 1698 aa7.86□□□□□ -1.15
GABRB3-218ENST00000635994 ERICH3Q5RHP9 1530 aa7.86□□□□□ -1.15
GABRB3-218ENST00000635994 HSP90B1P14625 803 aaKnown RBP7.86□□□□□ -1.15
GABRB3-218ENST00000635994 CC2D1BQ5T0F9 858 aaKnown RBP7.86□□□□□ -1.15
GABRB3-218ENST00000635994 SYNE3Q6ZMZ3 975 aa7.86□□□□□ -1.15
GABRB3-218ENST00000635994 KTN1Q86UP2 1357 aaKnown RBP7.86□□□□□ -1.15
GABRB3-218ENST00000635994 ZNF608Q9ULD9 1512 aaPredicted RBP7.85□□□□□ -1.15
GABRB3-218ENST00000635994 ARHGAP35Q9NRY4 1499 aa7.85□□□□□ -1.15
GABRB3-218ENST00000635994 TOMM22Q9NS69 142 aa7.85□□□□□ -1.15
GABRB3-218ENST00000635994 STK26Q9P289 416 aa7.85□□□□□ -1.15
GABRB3-218ENST00000635994 TPM1P09493 284 aa7.85□□□□□ -1.15
GABRB3-218ENST00000635994 NAP1L5Q96NT1 182 aaPredicted RBP7.85□□□□□ -1.15
GABRB3-218ENST00000635994 TCERG1O14776 1098 aaKnown RBP7.84□□□□□ -1.15
GABRB3-218ENST00000635994 U2AF1L5P0DN76 240 aaPredicted RBP7.84□□□□□ -1.15
GABRB3-218ENST00000635994 U2AF1Q01081 240 aaKnown RBP eCLIP7.84□□□□□ -1.15
GABRB3-218ENST00000635994 C1orf141Q5JVX7 400 aa7.84□□□□□ -1.15
GABRB3-218ENST00000635994 CCDC70Q6NSX1 233 aa7.84□□□□□ -1.15
GABRB3-218ENST00000635994 KIAA0586Q9BVV6 1533 aa7.84□□□□□ -1.15
GABRB3-218ENST00000635994 PMFBP1Q8TBY8 1022 aa7.84□□□□□ -1.15
GABRB3-218ENST00000635994 R3HCC1Q9Y3T6 440 aaKnown RBP7.84□□□□□ -1.15
GABRB3-218ENST00000635994 CCDC43Q96MW1 224 aaKnown RBP7.83□□□□□ -1.16
GABRB3-218ENST00000635994 PHF14O94880 888 aa7.83□□□□□ -1.16
GABRB3-218ENST00000635994 NEXNQ0ZGT2 675 aa7.83□□□□□ -1.16
GABRB3-218ENST00000635994 POGZQ7Z3K3 1410 aa7.83□□□□□ -1.16
GABRB3-218ENST00000635994 RALBP1Q15311 655 aa7.82□□□□□ -1.16
GABRB3-218ENST00000635994 ANKRD30AQ9BXX3 1397 aa7.82□□□□□ -1.16
GABRB3-218ENST00000635994 SAFB2Q14151 953 aaKnown RBP eCLIP7.82□□□□□ -1.16
GABRB3-218ENST00000635994 SF3A1Q15459 793 aaKnown RBP7.82□□□□□ -1.16
GABRB3-218ENST00000635994 KIF16BQ96L93 1317 aa7.82□□□□□ -1.16
GABRB3-218ENST00000635994 TTC5Q8N0Z6 440 aa7.82□□□□□ -1.16
GABRB3-218ENST00000635994 UACAQ9BZF9 1416 aa7.82□□□□□ -1.16
GABRB3-218ENST00000635994 IRX6P78412 446 aaPredicted RBP7.82□□□□□ -1.16
GABRB3-218ENST00000635994 TPD52L1Q16890 204 aaPredicted RBP7.82□□□□□ -1.16
GABRB3-218ENST00000635994 ANKRD20A12PQ8NF67 263 aa7.82□□□□□ -1.16
GABRB3-218ENST00000635994 WWC2Q6AWC2 1192 aa7.81□□□□□ -1.16
GABRB3-218ENST00000635994 SF3B2Q13435 895 aaKnown RBP7.81□□□□□ -1.16
GABRB3-218ENST00000635994 ATP6V1DQ9Y5K8 247 aa7.81□□□□□ -1.16
GABRB3-218ENST00000635994 WASHC2CQ9Y4E1 1318 aa7.81□□□□□ -1.16
GABRB3-218ENST00000635994 RDXP35241 583 aaKnown RBP7.81□□□□□ -1.16
GABRB3-218ENST00000635994 IQGAP2Q13576 1575 aa7.8□□□□□ -1.16
GABRB3-218ENST00000635994 IPO7O95373 1038 aaKnown RBP7.8□□□□□ -1.16
GABRB3-218ENST00000635994 PHF23Q9BUL5 403 aaPredicted RBP7.8□□□□□ -1.16
GABRB3-218ENST00000635994 EIF4G3O43432 1585 aaKnown RBP7.8□□□□□ -1.16
GABRB3-218ENST00000635994 HNRNPMP52272 730 aaKnown RBP eCLIP7.8□□□□□ -1.16
GABRB3-218ENST00000635994 ITPRIPQ8IWB1 547 aa7.8□□□□□ -1.16
GABRB3-218ENST00000635994 KIF3BO15066 747 aa7.8□□□□□ -1.16
GABRB3-218ENST00000635994 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
GABRB3-218ENST00000635994 HOOK1Q9UJC3 728 aaKnown RBP7.79□□□□□ -1.16
GABRB3-218ENST00000635994 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
GABRB3-218ENST00000635994 PHLDB1Q86UU1 1377 aa7.79□□□□□ -1.16
GABRB3-218ENST00000635994 TEFQ10587 303 aa7.79□□□□□ -1.16
GABRB3-218ENST00000635994 TRIM29Q14134 588 aa7.79□□□□□ -1.16
GABRB3-218ENST00000635994 VPS37DQ86XT2 251 aa7.79□□□□□ -1.16
GABRB3-218ENST00000635994 WDR97A6NE52 1622 aa7.78□□□□□ -1.16
GABRB3-218ENST00000635994 ARHGAP5Q13017 1502 aa7.78□□□□□ -1.16
GABRB3-218ENST00000635994 ST18O60284 1047 aa7.78□□□□□ -1.16
GABRB3-218ENST00000635994 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.78□□□□□ -1.16
GABRB3-218ENST00000635994 RUFY2Q8WXA3 655 aa7.78□□□□□ -1.16
GABRB3-218ENST00000635994 RBM33Q96EV2 1170 aaKnown RBP7.78□□□□□ -1.16
GABRB3-218ENST00000635994 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
GABRB3-218ENST00000635994 EFCAB5A4FU69 1503 aa7.78□□□□□ -1.16
GABRB3-218ENST00000635994 CDR1P51861 262 aa7.78□□□□□ -1.16
GABRB3-218ENST00000635994 APBB1O00213 710 aa7.77□□□□□ -1.17
GABRB3-218ENST00000635994 CCAR1Q8IX12 1150 aaKnown RBP7.77□□□□□ -1.17
GABRB3-218ENST00000635994 VGFO15240 615 aaPredicted RBP7.77□□□□□ -1.17
GABRB3-218ENST00000635994 SETQ01105 290 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms