RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 PNISRQ8TF01 805 aaKnown RBP14.46□□□□□ -0.09
PSPC1-207ENST00000635251 PRKCSHP14314 528 aaPredicted RBP14.46□□□□□ -0.09
PSPC1-207ENST00000635251 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
PSPC1-207ENST00000635251 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
PSPC1-207ENST00000635251 SAMD9LQ8IVG5 1584 aa14.45□□□□□ -0.1
PSPC1-207ENST00000635251 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
PSPC1-207ENST00000635251 CCDC144AA2RUR9 1427 aa14.43□□□□□ -0.1
PSPC1-207ENST00000635251 RALBP1Q15311 655 aa14.43□□□□□ -0.1
PSPC1-207ENST00000635251 PREX2Q70Z35 1606 aa14.43□□□□□ -0.1
PSPC1-207ENST00000635251 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
PSPC1-207ENST00000635251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■■□ 21.9
PSPC1-207ENST00000635251 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
PSPC1-207ENST00000635251 CDC42BPBQ9Y5S2 1711 aa14.42□□□□□ -0.1
PSPC1-207ENST00000635251 BRD4O60885 1362 aaPredicted RBP14.42□□□□□ -0.1
PSPC1-207ENST00000635251 CCDC136Q96JN2 1154 aa14.41□□□□□ -0.1
PSPC1-207ENST00000635251 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.1
PSPC1-207ENST00000635251 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
PSPC1-207ENST00000635251 RNF123Q5XPI4 1314 aa14.39□□□□□ -0.11
PSPC1-207ENST00000635251 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
PSPC1-207ENST00000635251 LRPPRCP42704 1394 aaKnown RBP14.38□□□□□ -0.11
PSPC1-207ENST00000635251 E9PCH4 1651 aa14.37□□□□□ -0.11
PSPC1-207ENST00000635251 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
PSPC1-207ENST00000635251 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
PSPC1-207ENST00000635251 TTC37Q6PGP7 1564 aa14.35□□□□□ -0.11
PSPC1-207ENST00000635251 NLRP13Q86W25 1043 aa14.35□□□□□ -0.11
PSPC1-207ENST00000635251 UNC13BO14795 1591 aa14.35□□□□□ -0.11
PSPC1-207ENST00000635251 SALL2Q9Y467 1007 aaPredicted RBP14.35□□□□□ -0.11
PSPC1-207ENST00000635251 MAST1Q9Y2H9 1570 aa14.35□□□□□ -0.11
PSPC1-207ENST00000635251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.34□□□□□ -0.11
PSPC1-207ENST00000635251 A2MP01023 1474 aa14.33□□□□□ -0.11
PSPC1-207ENST00000635251 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
PSPC1-207ENST00000635251 PARD3Q8TEW0 1356 aa14.32□□□□□ -0.12
PSPC1-207ENST00000635251 PLEKHH2Q8IVE3 1493 aa14.32□□□□□ -0.12
PSPC1-207ENST00000635251 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
PSPC1-207ENST00000635251 CHD1O14646 1710 aa14.31□□□□□ -0.12
PSPC1-207ENST00000635251 CC2D1BQ5T0F9 858 aaKnown RBP14.31□□□□□ -0.12
PSPC1-207ENST00000635251 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
PSPC1-207ENST00000635251 IQGAP3Q86VI3 1631 aa14.3□□□□□ -0.12
PSPC1-207ENST00000635251 MYO5CQ9NQX4 1742 aa14.3□□□□□ -0.12
PSPC1-207ENST00000635251 RRP1P56182 461 aaKnown RBP14.3□□□□□ -0.12
PSPC1-207ENST00000635251 COL17A1Q9UMD9 1497 aaPredicted RBP14.3□□□□□ -0.12
PSPC1-207ENST00000635251 PER1O15534 1290 aaPredicted RBP14.29□□□□□ -0.12
PSPC1-207ENST00000635251 TMF1P82094 1093 aa14.29□□□□□ -0.12
PSPC1-207ENST00000635251 DUOX2Q9NRD8 1548 aa14.29□□□□□ -0.12
PSPC1-207ENST00000635251 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
PSPC1-207ENST00000635251 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
PSPC1-207ENST00000635251 RCAN3Q9UKA8 241 aa14.29□□□□□ -0.12
PSPC1-207ENST00000635251 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
PSPC1-207ENST00000635251 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
PSPC1-207ENST00000635251 LAMC1P11047 1609 aa14.28□□□□□ -0.12
PSPC1-207ENST00000635251 ABCC2Q92887 1545 aa14.28□□□□□ -0.12
PSPC1-207ENST00000635251 ERBINQ96RT1 1412 aa14.28□□□□□ -0.12
PSPC1-207ENST00000635251 PDE3BQ13370 1112 aa14.28□□□□□ -0.12
PSPC1-207ENST00000635251 PANK3Q9H999 370 aa14.28□□□□□ -0.12
PSPC1-207ENST00000635251 TESK2Q96S53 571 aa14.27□□□□□ -0.12
PSPC1-207ENST00000635251 WASHC2CQ9Y4E1 1318 aa14.26□□□□□ -0.13
PSPC1-207ENST00000635251 SHROOM2Q13796 1616 aa14.26□□□□□ -0.13
PSPC1-207ENST00000635251 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
PSPC1-207ENST00000635251 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
PSPC1-207ENST00000635251 ANP32AP39687 249 aaKnown RBP14.25□□□□□ -0.13
PSPC1-207ENST00000635251 EFCAB2Q5VUJ9 269 aa14.25□□□□□ -0.13
PSPC1-207ENST00000635251 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
PSPC1-207ENST00000635251 PLCH2O75038 1416 aa14.24□□□□□ -0.13
PSPC1-207ENST00000635251 ATP10AO60312 1499 aa14.23□□□□□ -0.13
PSPC1-207ENST00000635251 MAGI2Q86UL8 1455 aa14.23□□□□□ -0.13
PSPC1-207ENST00000635251 CDCA7LQ96GN5 454 aa14.22□□□□□ -0.13
PSPC1-207ENST00000635251 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
PSPC1-207ENST00000635251 TRAPPC8Q9Y2L5 1435 aa14.19□□□□□ -0.14
PSPC1-207ENST00000635251 BCL11AQ9H165 835 aa14.19□□□□□ -0.14
PSPC1-207ENST00000635251 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
PSPC1-207ENST00000635251 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
PSPC1-207ENST00000635251 ABCC1P33527 1531 aa14.19□□□□□ -0.14
PSPC1-207ENST00000635251 ZCCHC11Q5TAX3 1644 aaKnown RBP14.19□□□□□ -0.14
PSPC1-207ENST00000635251 IPO9Q96P70 1041 aaKnown RBP14.18□□□□□ -0.14
PSPC1-207ENST00000635251 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
PSPC1-207ENST00000635251 INSRP06213 1382 aa14.18□□□□□ -0.14
PSPC1-207ENST00000635251 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
PSPC1-207ENST00000635251 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
PSPC1-207ENST00000635251 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
PSPC1-207ENST00000635251 TCERG1O14776 1098 aaKnown RBP14.16□□□□□ -0.14
PSPC1-207ENST00000635251 PLIN1O60240 522 aa14.16□□□□□ -0.14
PSPC1-207ENST00000635251 ZBTB47Q9UFB7 747 aaPredicted RBP14.16□□□□□ -0.14
PSPC1-207ENST00000635251 NBR1Q14596 966 aa14.16□□□□□ -0.14
PSPC1-207ENST00000635251 WDR43Q15061 677 aaKnown RBP eCLIP14.16□□□□□ -0.14
PSPC1-207ENST00000635251 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
PSPC1-207ENST00000635251 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
PSPC1-207ENST00000635251 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.14
PSPC1-207ENST00000635251 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
PSPC1-207ENST00000635251 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
PSPC1-207ENST00000635251 TRPM2O94759 1503 aa14.13□□□□□ -0.15
PSPC1-207ENST00000635251 UHRF1BP1LA0JNW5 1464 aa14.13□□□□□ -0.15
PSPC1-207ENST00000635251 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
PSPC1-207ENST00000635251 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
PSPC1-207ENST00000635251 CRBNQ96SW2 442 aa14.12□□□□□ -0.15
PSPC1-207ENST00000635251 SCAF11Q99590 1463 aaKnown RBP14.12□□□□□ -0.15
PSPC1-207ENST00000635251 RTEL1-TNFRSF6BF6WH68 1400 aa14.12□□□□□ -0.15
PSPC1-207ENST00000635251 IQGAP1P46940 1657 aa14.12□□□□□ -0.15
PSPC1-207ENST00000635251 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
PSPC1-207ENST00000635251 KANK1Q14678 1352 aa14.11□□□□□ -0.15
PSPC1-207ENST00000635251 PDE4AP27815 886 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 850 ms