RNA–Protein interactions for RNA: ENST00000634343.1

SMARCA2-221, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-221ENST00000634343 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
SMARCA2-221ENST00000634343 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
SMARCA2-221ENST00000634343 A0A0G2JS52 829 aa12.94□□□□□ -0.34
SMARCA2-221ENST00000634343 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
SMARCA2-221ENST00000634343 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
SMARCA2-221ENST00000634343 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
SMARCA2-221ENST00000634343 PHF14O94880 888 aa12.92□□□□□ -0.34
SMARCA2-221ENST00000634343 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
SMARCA2-221ENST00000634343 BCANQ96GW7 911 aa12.91□□□□□ -0.34
SMARCA2-221ENST00000634343 IRX2Q9BZI1 471 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-221ENST00000634343 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
SMARCA2-221ENST00000634343 PROX2Q3B8N5 592 aa12.88□□□□□ -0.35
SMARCA2-221ENST00000634343 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-221ENST00000634343 COL9A1P20849 921 aa12.86□□□□□ -0.35
SMARCA2-221ENST00000634343 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
SMARCA2-221ENST00000634343 EPAS1Q99814 870 aa12.86□□□□□ -0.35
SMARCA2-221ENST00000634343 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
SMARCA2-221ENST00000634343 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
SMARCA2-221ENST00000634343 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
SMARCA2-221ENST00000634343 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
SMARCA2-221ENST00000634343 BCAMP50895 628 aa12.8□□□□□ -0.36
SMARCA2-221ENST00000634343 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
SMARCA2-221ENST00000634343 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-221ENST00000634343 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
SMARCA2-221ENST00000634343 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
SMARCA2-221ENST00000634343 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
SMARCA2-221ENST00000634343 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
SMARCA2-221ENST00000634343 DPYSL4O14531 572 aa12.75□□□□□ -0.37
SMARCA2-221ENST00000634343 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
SMARCA2-221ENST00000634343 KCNC4Q03721 635 aa12.74□□□□□ -0.37
SMARCA2-221ENST00000634343 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
SMARCA2-221ENST00000634343 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
SMARCA2-221ENST00000634343 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
SMARCA2-221ENST00000634343 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
SMARCA2-221ENST00000634343 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
SMARCA2-221ENST00000634343 TSR3Q9UJK0 312 aaKnown RBP12.71□□□□□ -0.37
SMARCA2-221ENST00000634343 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
SMARCA2-221ENST00000634343 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
SMARCA2-221ENST00000634343 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
SMARCA2-221ENST00000634343 DDX12PQ92771 950 aa12.69□□□□□ -0.38
SMARCA2-221ENST00000634343 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
SMARCA2-221ENST00000634343 MAP3K7O43318 606 aa12.63□□□□□ -0.39
SMARCA2-221ENST00000634343 NBR1Q14596 966 aa12.63□□□□□ -0.39
SMARCA2-221ENST00000634343 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
SMARCA2-221ENST00000634343 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
SMARCA2-221ENST00000634343 Q6ZNB5 142 aa12.62□□□□□ -0.39
SMARCA2-221ENST00000634343 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-221ENST00000634343 PPP4CP60510 307 aa12.61□□□□□ -0.39
SMARCA2-221ENST00000634343 PDIA6Q15084 440 aa12.59□□□□□ -0.39
SMARCA2-221ENST00000634343 LAPTM4AQ15012 233 aa12.58□□□□□ -0.4
SMARCA2-221ENST00000634343 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
SMARCA2-221ENST00000634343 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
SMARCA2-221ENST00000634343 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
SMARCA2-221ENST00000634343 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
SMARCA2-221ENST00000634343 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
SMARCA2-221ENST00000634343 PRSS12P56730 875 aa12.53□□□□□ -0.4
SMARCA2-221ENST00000634343 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
SMARCA2-221ENST00000634343 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
SMARCA2-221ENST00000634343 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
SMARCA2-221ENST00000634343 E2F4Q16254 413 aa12.49□□□□□ -0.41
SMARCA2-221ENST00000634343 TJAP1Q5JTD0 557 aa12.48□□□□□ -0.41
SMARCA2-221ENST00000634343 SMAPO00193 183 aa12.47□□□□□ -0.41
SMARCA2-221ENST00000634343 TATDN2Q93075 761 aa12.47□□□□□ -0.41
SMARCA2-221ENST00000634343 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
SMARCA2-221ENST00000634343 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
SMARCA2-221ENST00000634343 GFRA3O60609 400 aa12.46□□□□□ -0.41
SMARCA2-221ENST00000634343 IL21Q9HBE4 155 aa12.46□□□□□ -0.41
SMARCA2-221ENST00000634343 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
SMARCA2-221ENST00000634343 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-221ENST00000634343 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
SMARCA2-221ENST00000634343 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
SMARCA2-221ENST00000634343 MTRQ99707 1265 aa12.43□□□□□ -0.42
SMARCA2-221ENST00000634343 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
SMARCA2-221ENST00000634343 PRKD2Q9BZL6 878 aa12.42□□□□□ -0.42
SMARCA2-221ENST00000634343 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
SMARCA2-221ENST00000634343 TRAF7Q6Q0C0 670 aa12.41□□□□□ -0.42
SMARCA2-221ENST00000634343 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-221ENST00000634343 NISCHQ9Y2I1 1504 aa12.4□□□□□ -0.42
SMARCA2-221ENST00000634343 RNF40O75150 1001 aa12.39□□□□□ -0.43
SMARCA2-221ENST00000634343 PPP1R18Q6NYC8 613 aa12.39□□□□□ -0.43
SMARCA2-221ENST00000634343 NUDT18Q6ZVK8 323 aa12.39□□□□□ -0.43
SMARCA2-221ENST00000634343 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
SMARCA2-221ENST00000634343 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-221ENST00000634343 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-221ENST00000634343 OSBPP22059 807 aa12.36□□□□□ -0.43
SMARCA2-221ENST00000634343 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
SMARCA2-221ENST00000634343 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
SMARCA2-221ENST00000634343 GGCXP38435 758 aa12.35□□□□□ -0.43
SMARCA2-221ENST00000634343 APLP1P51693 650 aa12.33□□□□□ -0.44
SMARCA2-221ENST00000634343 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
SMARCA2-221ENST00000634343 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
SMARCA2-221ENST00000634343 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
SMARCA2-221ENST00000634343 SWT1Q5T5J6 900 aaKnown RBP12.28□□□□□ -0.44
SMARCA2-221ENST00000634343 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
SMARCA2-221ENST00000634343 LCE2BO14633 110 aa12.27□□□□□ -0.45
SMARCA2-221ENST00000634343 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
SMARCA2-221ENST00000634343 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
SMARCA2-221ENST00000634343 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
SMARCA2-221ENST00000634343 COPS2P61201 443 aa12.25□□□□□ -0.45
SMARCA2-221ENST00000634343 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms