RNA–Protein interactions for RNA: ENST00000634343.1

SMARCA2-221, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-221ENST00000634343 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
SMARCA2-221ENST00000634343 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
SMARCA2-221ENST00000634343 SENP3Q9H4L4 574 aaPredicted RBP27.55■■■□□ 2
SMARCA2-221ENST00000634343 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
SMARCA2-221ENST00000634343 FOXD1Q16676 465 aa25.6■■□□□ 1.69
SMARCA2-221ENST00000634343 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
SMARCA2-221ENST00000634343 MSH5O43196 834 aa24.15■■□□□ 1.46
SMARCA2-221ENST00000634343 PIAS4Q8N2W9 510 aaPredicted RBP23.94■■□□□ 1.42
SMARCA2-221ENST00000634343 POTEDQ86YR6 584 aa23.78■■□□□ 1.4
SMARCA2-221ENST00000634343 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
SMARCA2-221ENST00000634343 ADRA2BP18089 450 aa23.71■■□□□ 1.39
SMARCA2-221ENST00000634343 SCAF1Q9H7N4 1312 aaKnown RBP21.87■■□□□ 1.09
SMARCA2-221ENST00000634343 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
SMARCA2-221ENST00000634343 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
SMARCA2-221ENST00000634343 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
SMARCA2-221ENST00000634343 DCAF8L1A6NGE4 600 aa20.93■□□□□ 0.94
SMARCA2-221ENST00000634343 HOXD11P31277 338 aaPredicted RBP20.9■□□□□ 0.94
SMARCA2-221ENST00000634343 CNKSR2Q8WXI2 1034 aa20.88■□□□□ 0.93
SMARCA2-221ENST00000634343 CACNB1Q02641 598 aaPredicted RBP20.83■□□□□ 0.93
SMARCA2-221ENST00000634343 RNF216Q9NWF9 866 aaPredicted RBP20.73■□□□□ 0.91
SMARCA2-221ENST00000634343 RNF39Q9H2S5 420 aa20.53■□□□□ 0.88
SMARCA2-221ENST00000634343 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
SMARCA2-221ENST00000634343 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
SMARCA2-221ENST00000634343 C1QBPQ07021 282 aaKnown RBP20.28■□□□□ 0.84
SMARCA2-221ENST00000634343 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
SMARCA2-221ENST00000634343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMARCA2-221ENST00000634343 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
SMARCA2-221ENST00000634343 KCNA4P22459 653 aa19.42■□□□□ 0.7
SMARCA2-221ENST00000634343 CAPN15O75808 1086 aa19.27■□□□□ 0.68
SMARCA2-221ENST00000634343 SPINK5Q9NQ38 1064 aaPredicted RBP19.2■□□□□ 0.66
SMARCA2-221ENST00000634343 DSG3P32926 999 aa19.15■□□□□ 0.66
SMARCA2-221ENST00000634343 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
SMARCA2-221ENST00000634343 APLP2Q06481 763 aa19.08■□□□□ 0.64
SMARCA2-221ENST00000634343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
SMARCA2-221ENST00000634343 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
SMARCA2-221ENST00000634343 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
SMARCA2-221ENST00000634343 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
SMARCA2-221ENST00000634343 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
SMARCA2-221ENST00000634343 ABCB7O75027 752 aa18.74■□□□□ 0.59
SMARCA2-221ENST00000634343 POTEHQ6S545 545 aa18.64■□□□□ 0.57
SMARCA2-221ENST00000634343 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
SMARCA2-221ENST00000634343 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-221ENST00000634343 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
SMARCA2-221ENST00000634343 POLA2Q14181 598 aa18.35■□□□□ 0.53
SMARCA2-221ENST00000634343 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
SMARCA2-221ENST00000634343 ZBTB12Q9Y330 459 aaPredicted RBP18.05■□□□□ 0.48
SMARCA2-221ENST00000634343 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
SMARCA2-221ENST00000634343 CHRDL2Q6WN34 429 aa17.98■□□□□ 0.47
SMARCA2-221ENST00000634343 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
SMARCA2-221ENST00000634343 ZBTB22O15209 634 aa17.79■□□□□ 0.44
SMARCA2-221ENST00000634343 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
SMARCA2-221ENST00000634343 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
SMARCA2-221ENST00000634343 REM2Q8IYK8 340 aaPredicted RBP17.68■□□□□ 0.42
SMARCA2-221ENST00000634343 FBLN2P98095 1184 aa17.52■□□□□ 0.4
SMARCA2-221ENST00000634343 PIP4P2Q8N4L2 257 aa17.49■□□□□ 0.39
SMARCA2-221ENST00000634343 PITPNM1O00562 1244 aa17.45■□□□□ 0.38
SMARCA2-221ENST00000634343 SPDYE2BA6NHP3 402 aa17.43■□□□□ 0.38
SMARCA2-221ENST00000634343 SPDYE6P0CI01 402 aa17.43■□□□□ 0.38
SMARCA2-221ENST00000634343 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
SMARCA2-221ENST00000634343 SP7Q8TDD2 431 aaPredicted RBP17.39■□□□□ 0.37
SMARCA2-221ENST00000634343 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
SMARCA2-221ENST00000634343 HAX1O00165 279 aa17.29■□□□□ 0.36
SMARCA2-221ENST00000634343 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
SMARCA2-221ENST00000634343 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-221ENST00000634343 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-221ENST00000634343 CLEC11AQ9Y240 323 aa17.15■□□□□ 0.34
SMARCA2-221ENST00000634343 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
SMARCA2-221ENST00000634343 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
SMARCA2-221ENST00000634343 EVX2Q03828 476 aa16.92■□□□□ 0.3
SMARCA2-221ENST00000634343 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMARCA2-221ENST00000634343 PRR29P0C7W0 189 aa16.86■□□□□ 0.29
SMARCA2-221ENST00000634343 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
SMARCA2-221ENST00000634343 C19orf67A6NJJ6 358 aa16.82■□□□□ 0.28
SMARCA2-221ENST00000634343 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
SMARCA2-221ENST00000634343 GABBR2O75899 941 aa16.62■□□□□ 0.25
SMARCA2-221ENST00000634343 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
SMARCA2-221ENST00000634343 FARP1Q9Y4F1 1045 aaPredicted RBP16.55■□□□□ 0.24
SMARCA2-221ENST00000634343 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
SMARCA2-221ENST00000634343 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
SMARCA2-221ENST00000634343 CLCN6P51797 869 aa16.45■□□□□ 0.22
SMARCA2-221ENST00000634343 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
SMARCA2-221ENST00000634343 LHX8Q68G74 356 aa16.33■□□□□ 0.2
SMARCA2-221ENST00000634343 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
SMARCA2-221ENST00000634343 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
SMARCA2-221ENST00000634343 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
SMARCA2-221ENST00000634343 DCBLD2Q96PD2 775 aa16.21■□□□□ 0.19
SMARCA2-221ENST00000634343 POTEIP0CG38 1075 aa16.19■□□□□ 0.18
SMARCA2-221ENST00000634343 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-221ENST00000634343 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMARCA2-221ENST00000634343 GALR2O43603 387 aaPredicted RBP15.99■□□□□ 0.15
SMARCA2-221ENST00000634343 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
SMARCA2-221ENST00000634343 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
SMARCA2-221ENST00000634343 PROM2Q8N271 834 aa15.9■□□□□ 0.14
SMARCA2-221ENST00000634343 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
SMARCA2-221ENST00000634343 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
SMARCA2-221ENST00000634343 MS4A3Q96HJ5 214 aa15.73■□□□□ 0.11
SMARCA2-221ENST00000634343 MIER1Q8N108 512 aa15.7■□□□□ 0.1
SMARCA2-221ENST00000634343 ASTLQ6HA08 431 aaPredicted RBP15.69■□□□□ 0.1
SMARCA2-221ENST00000634343 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-221ENST00000634343 OTUD5Q96G74 571 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms