RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 PLXNC1O60486 1568 aa26.01■■□□□ 1.75
PTBP1-220ENST00000627714 PLEKHH2Q8IVE3 1493 aa26.01■■□□□ 1.75
PTBP1-220ENST00000627714 TRPM1Q7Z4N2 1603 aa26.01■■□□□ 1.75
PTBP1-220ENST00000627714 CCDC144AA2RUR9 1427 aa26■■□□□ 1.75
PTBP1-220ENST00000627714 NUDCQ9Y266 331 aa26■■□□□ 1.75
PTBP1-220ENST00000627714 SYCP2Q9BX26 1530 aa26■■□□□ 1.75
PTBP1-220ENST00000627714 ST20-MTHFSA0A0A6YYL1 179 aa25.99■■□□□ 1.75
PTBP1-220ENST00000627714 PNISRQ8TF01 805 aaKnown RBP25.99■■□□□ 1.75
PTBP1-220ENST00000627714 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
PTBP1-220ENST00000627714 RALBP1Q15311 655 aa25.98■■□□□ 1.75
PTBP1-220ENST00000627714 ARHGAP5Q13017 1502 aa25.98■■□□□ 1.75
PTBP1-220ENST00000627714 PRAG1Q86YV5 1406 aa25.98■■□□□ 1.75
PTBP1-220ENST00000627714 CHD1O14646 1710 aa25.98■■□□□ 1.75
PTBP1-220ENST00000627714 TMC1Q8TDI8 760 aa25.98■■□□□ 1.75
PTBP1-220ENST00000627714 KDM2AQ9Y2K7 1162 aa25.98■■□□□ 1.75
PTBP1-220ENST00000627714 LAMC1P11047 1609 aa25.97■■□□□ 1.75
PTBP1-220ENST00000627714 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
PTBP1-220ENST00000627714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.96■■□□□ 1.755e-7■■■□□ 14.7
PTBP1-220ENST00000627714 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
PTBP1-220ENST00000627714 RNF123Q5XPI4 1314 aa25.96■■□□□ 1.75
PTBP1-220ENST00000627714 MYO5CQ9NQX4 1742 aa25.96■■□□□ 1.75
PTBP1-220ENST00000627714 MYBBP1AQ9BQG0 1328 aaKnown RBP25.95■■□□□ 1.74
PTBP1-220ENST00000627714 LRPPRCP42704 1394 aaKnown RBP25.95■■□□□ 1.74
PTBP1-220ENST00000627714 GPRASP1Q5JY77 1395 aa25.93■■□□□ 1.74
PTBP1-220ENST00000627714 ABCC2Q92887 1545 aa25.93■■□□□ 1.74
PTBP1-220ENST00000627714 EIF2AK4Q9P2K8 1649 aaKnown RBP25.91■■□□□ 1.74
PTBP1-220ENST00000627714 DUOX2Q9NRD8 1548 aa25.9■■□□□ 1.74
PTBP1-220ENST00000627714 B4GALNT3Q6L9W6 998 aa25.89■■□□□ 1.74
PTBP1-220ENST00000627714 ATP10AO60312 1499 aa25.89■■□□□ 1.73
PTBP1-220ENST00000627714 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
PTBP1-220ENST00000627714 MAGI2Q86UL8 1455 aa25.88■■□□□ 1.73
PTBP1-220ENST00000627714 ERBINQ96RT1 1412 aa25.87■■□□□ 1.73
PTBP1-220ENST00000627714 A2MP01023 1474 aa25.87■■□□□ 1.73
PTBP1-220ENST00000627714 PRDM15P57071 1507 aaPredicted RBP25.86■■□□□ 1.73
PTBP1-220ENST00000627714 CNGB1Q14028 1251 aaPredicted RBP25.86■■□□□ 1.73
PTBP1-220ENST00000627714 PARD3Q8TEW0 1356 aa25.83■■□□□ 1.73
PTBP1-220ENST00000627714 COL17A1Q9UMD9 1497 aaPredicted RBP25.83■■□□□ 1.72
PTBP1-220ENST00000627714 WASHC2CQ9Y4E1 1318 aa25.82■■□□□ 1.72
PTBP1-220ENST00000627714 MSH5O43196 834 aa25.82■■□□□ 1.72
PTBP1-220ENST00000627714 NLRP13Q86W25 1043 aa25.81■■□□□ 1.72
PTBP1-220ENST00000627714 PLCH2O75038 1416 aa25.78■■□□□ 1.72
PTBP1-220ENST00000627714 INSRP06213 1382 aa25.77■■□□□ 1.72
PTBP1-220ENST00000627714 ZMYM4Q5VZL5 1548 aa25.77■■□□□ 1.72
PTBP1-220ENST00000627714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.76■■□□□ 1.711e-7■■□□□ 14.5
PTBP1-220ENST00000627714 RGL3Q3MIN7 710 aa25.75■■□□□ 1.71
PTBP1-220ENST00000627714 UHRF1BP1LA0JNW5 1464 aa25.75■■□□□ 1.71
PTBP1-220ENST00000627714 RNF17Q9BXT8 1623 aaKnown RBP25.74■■□□□ 1.71
PTBP1-220ENST00000627714 ABCC1P33527 1531 aa25.74■■□□□ 1.71
PTBP1-220ENST00000627714 NBPF1Q3BBV0 1214 aa25.73■■□□□ 1.71
PTBP1-220ENST00000627714 PER1O15534 1290 aaPredicted RBP25.73■■□□□ 1.71
PTBP1-220ENST00000627714 PDE3BQ13370 1112 aa25.73■■□□□ 1.71
PTBP1-220ENST00000627714 CCDC136Q96JN2 1154 aa25.73■■□□□ 1.71
PTBP1-220ENST00000627714 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
PTBP1-220ENST00000627714 ZCCHC11Q5TAX3 1644 aaKnown RBP25.72■■□□□ 1.71
PTBP1-220ENST00000627714 EFCAB2Q5VUJ9 269 aa25.71■■□□□ 1.71
PTBP1-220ENST00000627714 ERICH6Q7L0X2 663 aa25.71■■□□□ 1.71
PTBP1-220ENST00000627714 TESK2Q96S53 571 aa25.71■■□□□ 1.71
PTBP1-220ENST00000627714 ARAP3Q8WWN8 1544 aa25.68■■□□□ 1.7
PTBP1-220ENST00000627714 TMF1P82094 1093 aa25.68■■□□□ 1.7
PTBP1-220ENST00000627714 DISP3Q9P2K9 1392 aa25.68■■□□□ 1.7
PTBP1-220ENST00000627714 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
PTBP1-220ENST00000627714 STAC3Q96MF2 364 aa25.64■■□□□ 1.7
PTBP1-220ENST00000627714 CLASP1Q7Z460 1538 aa25.64■■□□□ 1.69
PTBP1-220ENST00000627714 RRP1P56182 461 aaKnown RBP25.63■■□□□ 1.69
PTBP1-220ENST00000627714 TRPM2O94759 1503 aa25.62■■□□□ 1.69
PTBP1-220ENST00000627714 BLMP54132 1417 aaPredicted RBP25.62■■□□□ 1.69
PTBP1-220ENST00000627714 MADDQ8WXG6 1647 aa25.61■■□□□ 1.69
PTBP1-220ENST00000627714 TRAPPC8Q9Y2L5 1435 aa25.6■■□□□ 1.69
PTBP1-220ENST00000627714 RCAN3Q9UKA8 241 aa25.6■■□□□ 1.69
PTBP1-220ENST00000627714 IQGAP1P46940 1657 aa25.6■■□□□ 1.69
PTBP1-220ENST00000627714 CEP152O94986 1710 aa25.59■■□□□ 1.69
PTBP1-220ENST00000627714 PANK3Q9H999 370 aa25.59■■□□□ 1.69
PTBP1-220ENST00000627714 SPHKAPQ2M3C7 1700 aa25.58■■□□□ 1.69
PTBP1-220ENST00000627714 ZFYVE16Q7Z3T8 1539 aa25.58■■□□□ 1.69
PTBP1-220ENST00000627714 DEPDC5O75140 1603 aa25.58■■□□□ 1.69
PTBP1-220ENST00000627714 SPAG9O60271 1321 aaKnown RBP25.56■■□□□ 1.68
PTBP1-220ENST00000627714 PTPRTO14522 1441 aa25.55■■□□□ 1.68
PTBP1-220ENST00000627714 SCAPERQ9BY12 1400 aa25.54■■□□□ 1.68
PTBP1-220ENST00000627714 SENP3-EIF4A1A0A087X0R7 540 aa25.53■■□□□ 1.68
PTBP1-220ENST00000627714 TET3O43151 1660 aa25.53■■□□□ 1.68
PTBP1-220ENST00000627714 CC2D1BQ5T0F9 858 aaKnown RBP25.53■■□□□ 1.68
PTBP1-220ENST00000627714 CDCA8Q53HL2 280 aa25.52■■□□□ 1.68
PTBP1-220ENST00000627714 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
PTBP1-220ENST00000627714 NEURL4Q96JN8 1562 aa25.52■■□□□ 1.68
PTBP1-220ENST00000627714 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.67
PTBP1-220ENST00000627714 SYNMO15061 1565 aa25.51■■□□□ 1.67
PTBP1-220ENST00000627714 SCAF11Q99590 1463 aaKnown RBP25.5■■□□□ 1.67
PTBP1-220ENST00000627714 KIAA1210Q9ULL0 1709 aa25.48■■□□□ 1.67
PTBP1-220ENST00000627714 CLTCL1P53675 1640 aa25.48■■□□□ 1.67
PTBP1-220ENST00000627714 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
PTBP1-220ENST00000627714 INO80Q9ULG1 1556 aaPredicted RBP25.47■■□□□ 1.67
PTBP1-220ENST00000627714 KANK1Q14678 1352 aa25.46■■□□□ 1.67
PTBP1-220ENST00000627714 NOP58Q9Y2X3 529 aaKnown RBP25.45■■□□□ 1.67
PTBP1-220ENST00000627714 ABCA9Q8IUA7 1624 aa25.45■■□□□ 1.67
PTBP1-220ENST00000627714 ATP7AQ04656 1500 aa25.45■■□□□ 1.66
PTBP1-220ENST00000627714 ANP32AP39687 249 aaKnown RBP25.45■■□□□ 1.66
PTBP1-220ENST00000627714 EIF3AQ14152 1382 aaKnown RBP25.45■■□□□ 1.66
PTBP1-220ENST00000627714 EXOC6Q8TAG9 804 aa25.44■■□□□ 1.66
PTBP1-220ENST00000627714 KNSTRNQ9Y448 316 aa25.44■■□□□ 1.66
PTBP1-220ENST00000627714 SALL2Q9Y467 1007 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms