RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 EHBP1L1Q8N3D4 1523 aa14.94□□□□□ -0.02
ATRX-214ENST00000624166 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
ATRX-214ENST00000624166 IPO8O15397 1037 aaKnown RBP14.94□□□□□ -0.02
ATRX-214ENST00000624166 NCOA1Q15788 1441 aa14.94□□□□□ -0.02
ATRX-214ENST00000624166 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
ATRX-214ENST00000624166 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
ATRX-214ENST00000624166 CARMIL2Q6F5E8 1435 aa14.93□□□□□ -0.02
ATRX-214ENST00000624166 MFAP1P55081 439 aaKnown RBP14.92□□□□□ -0.02
ATRX-214ENST00000624166 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
ATRX-214ENST00000624166 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
ATRX-214ENST00000624166 AAMPQ13685 434 aa14.91□□□□□ -0.02
ATRX-214ENST00000624166 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
ATRX-214ENST00000624166 CC2D2AQ9P2K1 1620 aa14.9□□□□□ -0.02
ATRX-214ENST00000624166 C11orf95C9JLR9 678 aaPredicted RBP14.89□□□□□ -0.03
ATRX-214ENST00000624166 SKOR2Q2VWA4 1001 aaPredicted RBP14.89□□□□□ -0.03
ATRX-214ENST00000624166 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
ATRX-214ENST00000624166 CHMP5Q9NZZ3 219 aa14.89□□□□□ -0.03
ATRX-214ENST00000624166 PCF11O94913 1555 aaKnown RBP14.89□□□□□ -0.03
ATRX-214ENST00000624166 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
ATRX-214ENST00000624166 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
ATRX-214ENST00000624166 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
ATRX-214ENST00000624166 KANK1Q14678 1352 aa14.87□□□□□ -0.03
ATRX-214ENST00000624166 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
ATRX-214ENST00000624166 ITPRIPQ8IWB1 547 aa14.86□□□□□ -0.03
ATRX-214ENST00000624166 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
ATRX-214ENST00000624166 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
ATRX-214ENST00000624166 COG6Q9Y2V7 657 aa14.86□□□□□ -0.03
ATRX-214ENST00000624166 APAF1O14727 1248 aa14.86□□□□□ -0.03
ATRX-214ENST00000624166 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
ATRX-214ENST00000624166 HMGXB3Q12766 1538 aa14.85□□□□□ -0.03
ATRX-214ENST00000624166 KIAA1107Q9UPP5 1409 aa14.85□□□□□ -0.03
ATRX-214ENST00000624166 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
ATRX-214ENST00000624166 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
ATRX-214ENST00000624166 NESP48681 1621 aa14.84□□□□□ -0.03
ATRX-214ENST00000624166 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.031e-7■■■■■ 32.5
ATRX-214ENST00000624166 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
ATRX-214ENST00000624166 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.03
ATRX-214ENST00000624166 MRE11P49959 708 aa14.83□□□□□ -0.03
ATRX-214ENST00000624166 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.03
ATRX-214ENST00000624166 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.03
ATRX-214ENST00000624166 SMC4Q9NTJ3 1288 aa14.83□□□□□ -0.03
ATRX-214ENST00000624166 ANKRD30BQ9BXX2 1392 aa14.83□□□□□ -0.03
ATRX-214ENST00000624166 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.04
ATRX-214ENST00000624166 ROCK1Q13464 1354 aa14.83□□□□□ -0.04
ATRX-214ENST00000624166 ADAMTS8Q9UP79 889 aa14.82□□□□□ -0.04
ATRX-214ENST00000624166 CHAF1AQ13111 956 aaPredicted RBP14.81□□□□□ -0.04
ATRX-214ENST00000624166 ZKSCAN2Q63HK3 967 aa14.8□□□□□ -0.04
ATRX-214ENST00000624166 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
ATRX-214ENST00000624166 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
ATRX-214ENST00000624166 MCCP23508 829 aa14.78□□□□□ -0.04
ATRX-214ENST00000624166 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
ATRX-214ENST00000624166 RPRD2Q5VT52 1461 aaKnown RBP14.78□□□□□ -0.04
ATRX-214ENST00000624166 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
ATRX-214ENST00000624166 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
ATRX-214ENST00000624166 ISY1Q9ULR0 285 aaKnown RBP14.78□□□□□ -0.04
ATRX-214ENST00000624166 DAPK1P53355 1430 aa14.77□□□□□ -0.04
ATRX-214ENST00000624166 STAC3Q96MF2 364 aa14.77□□□□□ -0.04
ATRX-214ENST00000624166 C22orf23Q9BZE7 217 aa14.76□□□□□ -0.05
ATRX-214ENST00000624166 DDX49Q9Y6V7 483 aaKnown RBP14.76□□□□□ -0.05
ATRX-214ENST00000624166 PLCB2Q00722 1185 aa14.75□□□□□ -0.05
ATRX-214ENST00000624166 NINLQ9Y2I6 1382 aa14.75□□□□□ -0.05
ATRX-214ENST00000624166 TRAK2O60296 914 aa14.75□□□□□ -0.05
ATRX-214ENST00000624166 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
ATRX-214ENST00000624166 EFCAB2Q5VUJ9 269 aa14.74□□□□□ -0.05
ATRX-214ENST00000624166 DDX19BQ9UMR2 479 aa14.74□□□□□ -0.05
ATRX-214ENST00000624166 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
ATRX-214ENST00000624166 PPP2R1AP30153 589 aa14.74□□□□□ -0.05
ATRX-214ENST00000624166 BCL2L13Q9BXK5 485 aa14.73□□□□□ -0.05
ATRX-214ENST00000624166 RRP7AQ9Y3A4 280 aaKnown RBP14.73□□□□□ -0.05
ATRX-214ENST00000624166 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.72□□□□□ -0.05
ATRX-214ENST00000624166 DZIP1LQ8IYY4 767 aaKnown RBP14.72□□□□□ -0.05
ATRX-214ENST00000624166 POGKQ9P215 609 aa14.72□□□□□ -0.05
ATRX-214ENST00000624166 PANK1Q8TE04 598 aa14.72□□□□□ -0.05
ATRX-214ENST00000624166 ST18O60284 1047 aa14.71□□□□□ -0.05
ATRX-214ENST00000624166 RUNDC1Q96C34 613 aa14.71□□□□□ -0.05
ATRX-214ENST00000624166 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
ATRX-214ENST00000624166 TPM2P07951 284 aa14.71□□□□□ -0.06
ATRX-214ENST00000624166 JPH4Q96JJ6 628 aa14.7□□□□□ -0.06
ATRX-214ENST00000624166 PTPRKQ15262 1439 aa14.7□□□□□ -0.06
ATRX-214ENST00000624166 SRPK2P78362 688 aaKnown RBP14.7□□□□□ -0.06
ATRX-214ENST00000624166 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
ATRX-214ENST00000624166 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
ATRX-214ENST00000624166 UBE2Q2Q8WVN8 375 aa14.68□□□□□ -0.06
ATRX-214ENST00000624166 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
ATRX-214ENST00000624166 PHF14O94880 888 aa14.68□□□□□ -0.06
ATRX-214ENST00000624166 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
ATRX-214ENST00000624166 EPRSP07814 1512 aaKnown RBP14.68□□□□□ -0.06
ATRX-214ENST00000624166 RRP9O43818 475 aaKnown RBP14.68□□□□□ -0.06
ATRX-214ENST00000624166 CSPP1Q1MSJ5 1256 aa14.68□□□□□ -0.06
ATRX-214ENST00000624166 MCM4P33991 863 aa14.67□□□□□ -0.06
ATRX-214ENST00000624166 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
ATRX-214ENST00000624166 PDZRN3Q9UPQ7 1066 aa14.67□□□□□ -0.06
ATRX-214ENST00000624166 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
ATRX-214ENST00000624166 NBPF1Q3BBV0 1214 aa14.66□□□□□ -0.06
ATRX-214ENST00000624166 PKNOX2Q96KN3 472 aa14.66□□□□□ -0.06
ATRX-214ENST00000624166 HDGFL2Q7Z4V5 671 aaPredicted RBP14.66□□□□□ -0.06
ATRX-214ENST00000624166 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
ATRX-214ENST00000624166 CUL7Q14999 1698 aa14.66□□□□□ -0.06
ATRX-214ENST00000624166 SLFN5Q08AF3 891 aa14.66□□□□□ -0.06
ATRX-214ENST00000624166 ANKRD45Q5TZF3 282 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms