RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
CDKL5-206ENST00000623610 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.54
CDKL5-206ENST00000623610 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.54
CDKL5-206ENST00000623610 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.54
CDKL5-206ENST00000623610 IPO4Q8TEX9 1081 aaKnown RBP11.7□□□□□ -0.54
CDKL5-206ENST00000623610 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
CDKL5-206ENST00000623610 GLIPR1L2Q4G1C9 344 aa11.68□□□□□ -0.54
CDKL5-206ENST00000623610 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
CDKL5-206ENST00000623610 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
CDKL5-206ENST00000623610 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
CDKL5-206ENST00000623610 ZNF777Q9ULD5 760 aaPredicted RBP11.68□□□□□ -0.54
CDKL5-206ENST00000623610 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
CDKL5-206ENST00000623610 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
CDKL5-206ENST00000623610 ZMYND10O75800 440 aa11.66□□□□□ -0.54
CDKL5-206ENST00000623610 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
CDKL5-206ENST00000623610 PPME1Q9Y570 386 aa11.66□□□□□ -0.54
CDKL5-206ENST00000623610 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
CDKL5-206ENST00000623610 A6NJR5 290 aa11.65□□□□□ -0.54
CDKL5-206ENST00000623610 MYH16Q9H6N6 1097 aa11.65□□□□□ -0.54
CDKL5-206ENST00000623610 NEFMP07197 916 aa11.65□□□□□ -0.55
CDKL5-206ENST00000623610 ONECUT3O60422 494 aaPredicted RBP11.64□□□□□ -0.55
CDKL5-206ENST00000623610 FLIIQ13045 1269 aa11.64□□□□□ -0.55
CDKL5-206ENST00000623610 TPD52L2O43399 206 aaKnown RBP11.63□□□□□ -0.55
CDKL5-206ENST00000623610 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
CDKL5-206ENST00000623610 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
CDKL5-206ENST00000623610 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
CDKL5-206ENST00000623610 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
CDKL5-206ENST00000623610 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
CDKL5-206ENST00000623610 GAPVD1Q14C86 1478 aa11.62□□□□□ -0.55
CDKL5-206ENST00000623610 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
CDKL5-206ENST00000623610 FTSJ3Q8IY81 847 aaKnown RBP11.61□□□□□ -0.55
CDKL5-206ENST00000623610 SUGT1Q9Y2Z0 365 aa11.61□□□□□ -0.55
CDKL5-206ENST00000623610 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
CDKL5-206ENST00000623610 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
CDKL5-206ENST00000623610 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
CDKL5-206ENST00000623610 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
CDKL5-206ENST00000623610 PBRM1Q86U86 1689 aa11.6□□□□□ -0.55
CDKL5-206ENST00000623610 CCDC97Q96F63 343 aaPredicted RBP11.59□□□□□ -0.55
CDKL5-206ENST00000623610 CHMP4BQ9H444 224 aaKnown RBP11.59□□□□□ -0.55
CDKL5-206ENST00000623610 CHD1O14646 1710 aa11.58□□□□□ -0.56
CDKL5-206ENST00000623610 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
CDKL5-206ENST00000623610 GORABQ5T7V8 394 aa11.57□□□□□ -0.56
CDKL5-206ENST00000623610 APBB1IPQ7Z5R6 666 aaPredicted RBP11.57□□□□□ -0.56
CDKL5-206ENST00000623610 MICAL1Q8TDZ2 1067 aa11.57□□□□□ -0.56
CDKL5-206ENST00000623610 POLA2Q14181 598 aa11.56□□□□□ -0.56
CDKL5-206ENST00000623610 MAGI1Q96QZ7 1491 aaPredicted RBP11.56□□□□□ -0.56
CDKL5-206ENST00000623610 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
CDKL5-206ENST00000623610 FAM117AQ9C073 453 aa11.56□□□□□ -0.56
CDKL5-206ENST00000623610 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
CDKL5-206ENST00000623610 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
CDKL5-206ENST00000623610 FAM193AP78312 1265 aa11.54□□□□□ -0.56
CDKL5-206ENST00000623610 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
CDKL5-206ENST00000623610 TERF2IPQ9NYB0 399 aa11.54□□□□□ -0.56
CDKL5-206ENST00000623610 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
CDKL5-206ENST00000623610 ZNF662Q6ZS27 426 aa11.53□□□□□ -0.56
CDKL5-206ENST00000623610 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
CDKL5-206ENST00000623610 NME8Q8N427 588 aa11.51□□□□□ -0.57
CDKL5-206ENST00000623610 KIAA1522Q9P206 1035 aaPredicted RBP11.51□□□□□ -0.57
CDKL5-206ENST00000623610 ERICH3Q5RHP9 1530 aa11.51□□□□□ -0.57
CDKL5-206ENST00000623610 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
CDKL5-206ENST00000623610 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
CDKL5-206ENST00000623610 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
CDKL5-206ENST00000623610 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
CDKL5-206ENST00000623610 DRC1Q96MC2 740 aa11.49□□□□□ -0.57
CDKL5-206ENST00000623610 FOSBP53539 338 aa11.48□□□□□ -0.57
CDKL5-206ENST00000623610 RALBP1Q15311 655 aa11.48□□□□□ -0.57
CDKL5-206ENST00000623610 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
CDKL5-206ENST00000623610 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
CDKL5-206ENST00000623610 SEMA3EO15041 775 aa11.47□□□□□ -0.57
CDKL5-206ENST00000623610 IGF1RP08069 1367 aa11.47□□□□□ -0.57
CDKL5-206ENST00000623610 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
CDKL5-206ENST00000623610 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
CDKL5-206ENST00000623610 GRIN2AQ12879 1464 aa11.46□□□□□ -0.57
CDKL5-206ENST00000623610 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
CDKL5-206ENST00000623610 PEX14O75381 377 aa11.45□□□□□ -0.58
CDKL5-206ENST00000623610 AK7Q96M32 723 aa11.45□□□□□ -0.58
CDKL5-206ENST00000623610 GIMAP6Q6P9H5 292 aa11.44□□□□□ -0.58
CDKL5-206ENST00000623610 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
CDKL5-206ENST00000623610 SREK1Q8WXA9 508 aaKnown RBP11.44□□□□□ -0.58
CDKL5-206ENST00000623610 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
CDKL5-206ENST00000623610 ARHGEF11O15085 1522 aa11.42□□□□□ -0.58
CDKL5-206ENST00000623610 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
CDKL5-206ENST00000623610 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
CDKL5-206ENST00000623610 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
CDKL5-206ENST00000623610 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
CDKL5-206ENST00000623610 PHF14O94880 888 aa11.42□□□□□ -0.58
CDKL5-206ENST00000623610 PPP1R1BQ9UD71 204 aaPredicted RBP11.42□□□□□ -0.58
CDKL5-206ENST00000623610 FOXD4Q12950 439 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-206ENST00000623610 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-206ENST00000623610 PLEKHG3A1L390 1219 aa11.41□□□□□ -0.58
CDKL5-206ENST00000623610 MAP4K4O95819 1239 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-206ENST00000623610 MRRFQ96E11 262 aaKnown RBP11.41□□□□□ -0.58
CDKL5-206ENST00000623610 CUL7Q14999 1698 aa11.4□□□□□ -0.58
CDKL5-206ENST00000623610 NUP160Q12769 1436 aa11.4□□□□□ -0.58
CDKL5-206ENST00000623610 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
CDKL5-206ENST00000623610 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
CDKL5-206ENST00000623610 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
CDKL5-206ENST00000623610 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
CDKL5-206ENST00000623610 KCNA1Q09470 495 aa11.39□□□□□ -0.59
CDKL5-206ENST00000623610 RPS6KL1Q9Y6S9 549 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms