RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 ZNF771Q7L3S4 317 aaPredicted RBP13.47□□□□□ -0.25
CDHR1-206ENST00000623527 EXOC6Q8TAG9 804 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 RALBP1Q15311 655 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
CDHR1-206ENST00000623527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDHR1-206ENST00000623527 HMMRO75330 724 aa13.46□□□□□ -0.25
CDHR1-206ENST00000623527 KANK1Q14678 1352 aa13.46□□□□□ -0.26
CDHR1-206ENST00000623527 H3BQV1 296 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 VPS8Q8N3P4 1428 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
CDHR1-206ENST00000623527 MARCH6O60337 910 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 FBXW7Q969H0 707 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 CEP89Q96ST8 783 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
CDHR1-206ENST00000623527 TPD52L1Q16890 204 aaPredicted RBP13.45□□□□□ -0.26
CDHR1-206ENST00000623527 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 CCDC34Q96HJ3 373 aa13.45□□□□□ -0.26
CDHR1-206ENST00000623527 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
CDHR1-206ENST00000623527 MCTP1Q6DN14 999 aa13.44□□□□□ -0.26
CDHR1-206ENST00000623527 PHF14O94880 888 aa13.44□□□□□ -0.26
CDHR1-206ENST00000623527 BECN2A8MW95 431 aa13.44□□□□□ -0.26
CDHR1-206ENST00000623527 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
CDHR1-206ENST00000623527 RAB3GAP2Q9H2M9 1393 aa13.44□□□□□ -0.26
CDHR1-206ENST00000623527 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
CDHR1-206ENST00000623527 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
CDHR1-206ENST00000623527 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
CDHR1-206ENST00000623527 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
CDHR1-206ENST00000623527 CRBNQ96SW2 442 aa13.43□□□□□ -0.26
CDHR1-206ENST00000623527 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
CDHR1-206ENST00000623527 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
CDHR1-206ENST00000623527 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
CDHR1-206ENST00000623527 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
CDHR1-206ENST00000623527 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
CDHR1-206ENST00000623527 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
CDHR1-206ENST00000623527 FAM161AQ3B820 660 aa13.41□□□□□ -0.26
CDHR1-206ENST00000623527 NUP155O75694 1391 aa13.4□□□□□ -0.26
CDHR1-206ENST00000623527 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
CDHR1-206ENST00000623527 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
CDHR1-206ENST00000623527 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
CDHR1-206ENST00000623527 FOSBP53539 338 aa13.39□□□□□ -0.27
CDHR1-206ENST00000623527 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
CDHR1-206ENST00000623527 G3V3G9 751 aa13.38□□□□□ -0.27
CDHR1-206ENST00000623527 DCAF8Q5TAQ9 597 aa13.38□□□□□ -0.27
CDHR1-206ENST00000623527 SETQ01105 290 aaPredicted RBP13.38□□□□□ -0.27
CDHR1-206ENST00000623527 RAD21O60216 631 aa13.38□□□□□ -0.27
CDHR1-206ENST00000623527 AMPHP49418 695 aa13.37□□□□□ -0.27
CDHR1-206ENST00000623527 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
CDHR1-206ENST00000623527 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
CDHR1-206ENST00000623527 GTF2E1P29083 439 aaPredicted RBP13.37□□□□□ -0.27
CDHR1-206ENST00000623527 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
CDHR1-206ENST00000623527 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
CDHR1-206ENST00000623527 HOMER1Q86YM7 354 aa13.36□□□□□ -0.27
CDHR1-206ENST00000623527 PCMTD1Q96MG8 357 aaPredicted RBP13.36□□□□□ -0.27
CDHR1-206ENST00000623527 CENPQQ7L2Z9 268 aaPredicted RBP13.36□□□□□ -0.27
CDHR1-206ENST00000623527 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
CDHR1-206ENST00000623527 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
CDHR1-206ENST00000623527 TMX4Q9H1E5 349 aaPredicted RBP13.35□□□□□ -0.27
CDHR1-206ENST00000623527 PANK3Q9H999 370 aa13.34□□□□□ -0.27
CDHR1-206ENST00000623527 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
CDHR1-206ENST00000623527 RRP1P56182 461 aaKnown RBP13.34□□□□□ -0.27
CDHR1-206ENST00000623527 ST20-MTHFSA0A0A6YYL1 179 aa13.33□□□□□ -0.27
CDHR1-206ENST00000623527 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
CDHR1-206ENST00000623527 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
CDHR1-206ENST00000623527 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
CDHR1-206ENST00000623527 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
CDHR1-206ENST00000623527 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
CDHR1-206ENST00000623527 VPS37CA5D8V6 355 aaPredicted RBP13.32□□□□□ -0.28
CDHR1-206ENST00000623527 KIF3BO15066 747 aa13.32□□□□□ -0.28
CDHR1-206ENST00000623527 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
CDHR1-206ENST00000623527 DIAPH3Q9NSV4 1193 aa13.32□□□□□ -0.28
CDHR1-206ENST00000623527 AKAP17AQ02040 695 aaKnown RBP13.31□□□□□ -0.28
CDHR1-206ENST00000623527 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
CDHR1-206ENST00000623527 APAF1O14727 1248 aa13.31□□□□□ -0.28
CDHR1-206ENST00000623527 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDHR1-206ENST00000623527 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
CDHR1-206ENST00000623527 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
CDHR1-206ENST00000623527 TPM1P09493 284 aa13.31□□□□□ -0.28
CDHR1-206ENST00000623527 GPS2Q13227 327 aa13.31□□□□□ -0.28
CDHR1-206ENST00000623527 ANO2Q9NQ90 1003 aa13.31□□□□□ -0.28
CDHR1-206ENST00000623527 RNF214Q8ND24 703 aa13.3□□□□□ -0.28
CDHR1-206ENST00000623527 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
CDHR1-206ENST00000623527 FAM43AQ8N2R8 423 aa13.3□□□□□ -0.28
CDHR1-206ENST00000623527 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
CDHR1-206ENST00000623527 ATP6V1DQ9Y5K8 247 aa13.3□□□□□ -0.28
CDHR1-206ENST00000623527 KDM4AO75164 1064 aa13.3□□□□□ -0.28
CDHR1-206ENST00000623527 APPP05067 770 aa13.29□□□□□ -0.28
CDHR1-206ENST00000623527 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
CDHR1-206ENST00000623527 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
CDHR1-206ENST00000623527 CCDC70Q6NSX1 233 aa13.27□□□□□ -0.28
CDHR1-206ENST00000623527 LNPKQ9C0E8 428 aa13.27□□□□□ -0.28
CDHR1-206ENST00000623527 CUX2O14529 1486 aa13.27□□□□□ -0.28
CDHR1-206ENST00000623527 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
CDHR1-206ENST00000623527 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
CDHR1-206ENST00000623527 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms