RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
CHD1L-210ENST00000622533 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
CHD1L-210ENST00000622533 WASHC2CQ9Y4E1 1318 aa17.37■□□□□ 0.37
CHD1L-210ENST00000622533 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
CHD1L-210ENST00000622533 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
CHD1L-210ENST00000622533 NUP155O75694 1391 aa17.36■□□□□ 0.37
CHD1L-210ENST00000622533 RALBP1Q15311 655 aa17.36■□□□□ 0.37
CHD1L-210ENST00000622533 POLR3GLQ9BT43 218 aa17.36■□□□□ 0.37
CHD1L-210ENST00000622533 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
CHD1L-210ENST00000622533 PDE4AP27815 886 aa17.35■□□□□ 0.37
CHD1L-210ENST00000622533 FBLN2P98095 1184 aa17.35■□□□□ 0.37
CHD1L-210ENST00000622533 USP35Q9P2H5 1018 aa17.35■□□□□ 0.37
CHD1L-210ENST00000622533 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
CHD1L-210ENST00000622533 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
CHD1L-210ENST00000622533 LRPPRCP42704 1394 aaKnown RBP17.34■□□□□ 0.37
CHD1L-210ENST00000622533 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
CHD1L-210ENST00000622533 ABCC10Q5T3U5 1492 aa17.34■□□□□ 0.37
CHD1L-210ENST00000622533 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
CHD1L-210ENST00000622533 PTPRGP23470 1445 aa17.33■□□□□ 0.36
CHD1L-210ENST00000622533 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
CHD1L-210ENST00000622533 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
CHD1L-210ENST00000622533 ARHGEF5Q12774 1597 aa17.32■□□□□ 0.36
CHD1L-210ENST00000622533 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
CHD1L-210ENST00000622533 NUP160Q12769 1436 aa17.32■□□□□ 0.36
CHD1L-210ENST00000622533 ABCA8O94911 1581 aa17.31■□□□□ 0.36
CHD1L-210ENST00000622533 E9PCH4 1651 aa17.3■□□□□ 0.36
CHD1L-210ENST00000622533 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
CHD1L-210ENST00000622533 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
CHD1L-210ENST00000622533 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
CHD1L-210ENST00000622533 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
CHD1L-210ENST00000622533 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
CHD1L-210ENST00000622533 GSE1Q14687 1217 aa17.28■□□□□ 0.36
CHD1L-210ENST00000622533 ST20-MTHFSA0A0A6YYL1 179 aa17.27■□□□□ 0.35
CHD1L-210ENST00000622533 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
CHD1L-210ENST00000622533 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
CHD1L-210ENST00000622533 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
CHD1L-210ENST00000622533 ATP10BO94823 1461 aa17.26■□□□□ 0.35
CHD1L-210ENST00000622533 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
CHD1L-210ENST00000622533 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
CHD1L-210ENST00000622533 INSRP06213 1382 aa17.24■□□□□ 0.35
CHD1L-210ENST00000622533 NLRP13Q86W25 1043 aa17.24■□□□□ 0.35
CHD1L-210ENST00000622533 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
CHD1L-210ENST00000622533 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
CHD1L-210ENST00000622533 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
CHD1L-210ENST00000622533 ZMYM4Q5VZL5 1548 aa17.22■□□□□ 0.35
CHD1L-210ENST00000622533 FAM135AQ9P2D6 1515 aa17.22■□□□□ 0.35
CHD1L-210ENST00000622533 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
CHD1L-210ENST00000622533 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
CHD1L-210ENST00000622533 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
CHD1L-210ENST00000622533 LAMC1P11047 1609 aa17.21■□□□□ 0.35
CHD1L-210ENST00000622533 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
CHD1L-210ENST00000622533 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
CHD1L-210ENST00000622533 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
CHD1L-210ENST00000622533 GPRASP1Q5JY77 1395 aa17.19■□□□□ 0.34
CHD1L-210ENST00000622533 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
CHD1L-210ENST00000622533 PREX2Q70Z35 1606 aa17.17■□□□□ 0.34
CHD1L-210ENST00000622533 MAST1Q9Y2H9 1570 aa17.16■□□□□ 0.34
CHD1L-210ENST00000622533 MS4A1P11836 297 aa17.16■□□□□ 0.34
CHD1L-210ENST00000622533 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.343e-7■■□□□ 12.7
CHD1L-210ENST00000622533 EIF2AK4Q9P2K8 1649 aaKnown RBP17.16■□□□□ 0.34
CHD1L-210ENST00000622533 UNC13BO14795 1591 aa17.16■□□□□ 0.34
CHD1L-210ENST00000622533 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
CHD1L-210ENST00000622533 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.34
CHD1L-210ENST00000622533 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
CHD1L-210ENST00000622533 PLIN1O60240 522 aa17.14■□□□□ 0.33
CHD1L-210ENST00000622533 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
CHD1L-210ENST00000622533 PRDM15P57071 1507 aaPredicted RBP17.13■□□□□ 0.33
CHD1L-210ENST00000622533 CDC42BPBQ9Y5S2 1711 aa17.12■□□□□ 0.33
CHD1L-210ENST00000622533 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
CHD1L-210ENST00000622533 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-210ENST00000622533 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-210ENST00000622533 IQGAP3Q86VI3 1631 aa17.09■□□□□ 0.33
CHD1L-210ENST00000622533 PLXNC1O60486 1568 aa17.09■□□□□ 0.33
CHD1L-210ENST00000622533 A2MP01023 1474 aa17.09■□□□□ 0.33
CHD1L-210ENST00000622533 ATP10AO60312 1499 aa17.08■□□□□ 0.33
CHD1L-210ENST00000622533 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.33
CHD1L-210ENST00000622533 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
CHD1L-210ENST00000622533 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
CHD1L-210ENST00000622533 TMF1P82094 1093 aa17.07■□□□□ 0.32
CHD1L-210ENST00000622533 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
CHD1L-210ENST00000622533 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
CHD1L-210ENST00000622533 TESK2Q96S53 571 aa17.05■□□□□ 0.32
CHD1L-210ENST00000622533 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
CHD1L-210ENST00000622533 RSPH6AQ9H0K4 717 aa17.05■□□□□ 0.32
CHD1L-210ENST00000622533 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
CHD1L-210ENST00000622533 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
CHD1L-210ENST00000622533 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
CHD1L-210ENST00000622533 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
CHD1L-210ENST00000622533 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
CHD1L-210ENST00000622533 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
CHD1L-210ENST00000622533 MAGI2Q86UL8 1455 aa17.03■□□□□ 0.32
CHD1L-210ENST00000622533 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
CHD1L-210ENST00000622533 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.31
CHD1L-210ENST00000622533 PANK3Q9H999 370 aa17.01■□□□□ 0.31
CHD1L-210ENST00000622533 CC2D1BQ5T0F9 858 aaKnown RBP17■□□□□ 0.31
CHD1L-210ENST00000622533 TTC37Q6PGP7 1564 aa16.99■□□□□ 0.31
CHD1L-210ENST00000622533 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
CHD1L-210ENST00000622533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.31
CHD1L-210ENST00000622533 C20orf194Q5TEA3 1177 aa16.98■□□□□ 0.31
CHD1L-210ENST00000622533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.311e-8■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms