RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
MALAT1-217ENST00000620902 SPDYE16A6NNV3 312 aaPredicted RBP17.02■□□□□ 0.32
MALAT1-217ENST00000620902 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
MALAT1-217ENST00000620902 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
MALAT1-217ENST00000620902 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
MALAT1-217ENST00000620902 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
MALAT1-217ENST00000620902 PPP4R3BQ5MIZ7 849 aa16.99■□□□□ 0.31
MALAT1-217ENST00000620902 PDIA6Q15084 440 aa16.98■□□□□ 0.31
MALAT1-217ENST00000620902 FBXO41Q8TF61 875 aa16.98■□□□□ 0.31
MALAT1-217ENST00000620902 ARHGEF1Q92888 912 aaKnown RBP16.98■□□□□ 0.31
MALAT1-217ENST00000620902 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
MALAT1-217ENST00000620902 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
MALAT1-217ENST00000620902 SOCS7O14512 581 aa16.96■□□□□ 0.31
MALAT1-217ENST00000620902 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
MALAT1-217ENST00000620902 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
MALAT1-217ENST00000620902 FOSBP53539 338 aa16.95■□□□□ 0.3
MALAT1-217ENST00000620902 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
MALAT1-217ENST00000620902 PTGER2P43116 358 aa16.94■□□□□ 0.3
MALAT1-217ENST00000620902 ZNF454Q8N9F8 522 aa16.94■□□□□ 0.3
MALAT1-217ENST00000620902 PBX2P40425 430 aa16.93■□□□□ 0.3
MALAT1-217ENST00000620902 PHF14O94880 888 aa16.89■□□□□ 0.29
MALAT1-217ENST00000620902 KRTAP3-3Q9BYR6 98 aa16.89■□□□□ 0.29
MALAT1-217ENST00000620902 KRTAP3-2Q9BYR7 98 aa16.89■□□□□ 0.29
MALAT1-217ENST00000620902 CHD1O14646 1710 aa16.87■□□□□ 0.29
MALAT1-217ENST00000620902 ZDHHC16Q969W1 377 aa16.87■□□□□ 0.29
MALAT1-217ENST00000620902 PCDHGA10Q9Y5H3 936 aa16.86■□□□□ 0.29
MALAT1-217ENST00000620902 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
MALAT1-217ENST00000620902 ARHGAP33O14559 1287 aa16.85■□□□□ 0.29
MALAT1-217ENST00000620902 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
MALAT1-217ENST00000620902 EPAS1Q99814 870 aa16.85■□□□□ 0.29
MALAT1-217ENST00000620902 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
MALAT1-217ENST00000620902 TYW1BQ6NUM6 668 aa16.83■□□□□ 0.28
MALAT1-217ENST00000620902 BCL2L12Q9HB09 334 aa16.83■□□□□ 0.28
MALAT1-217ENST00000620902 KCNH8Q96L42 1107 aa16.82■□□□□ 0.28
MALAT1-217ENST00000620902 POTEEQ6S8J3 1075 aa16.81■□□□□ 0.28
MALAT1-217ENST00000620902 DDX12PQ92771 950 aa16.81■□□□□ 0.28
MALAT1-217ENST00000620902 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
MALAT1-217ENST00000620902 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
MALAT1-217ENST00000620902 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
MALAT1-217ENST00000620902 HECW2Q9P2P5 1572 aa16.79■□□□□ 0.28
MALAT1-217ENST00000620902 AXIN2Q9Y2T1 843 aa16.78■□□□□ 0.28
MALAT1-217ENST00000620902 PTPREP23469 700 aa16.77■□□□□ 0.28
MALAT1-217ENST00000620902 LSM11P83369 360 aaKnown RBP eCLIP16.77■□□□□ 0.28
MALAT1-217ENST00000620902 ADAM33Q9BZ11 813 aa16.77■□□□□ 0.28
MALAT1-217ENST00000620902 KCNK17Q96T54 332 aa16.75■□□□□ 0.27
MALAT1-217ENST00000620902 GRXCR2A6NFK2 248 aa16.73■□□□□ 0.27
MALAT1-217ENST00000620902 NBR1Q14596 966 aa16.73■□□□□ 0.27
MALAT1-217ENST00000620902 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
MALAT1-217ENST00000620902 PSEN2P49810 448 aa16.72■□□□□ 0.27
MALAT1-217ENST00000620902 ANKRD13DQ6ZTN6 518 aa16.72■□□□□ 0.27
MALAT1-217ENST00000620902 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
MALAT1-217ENST00000620902 EN1Q05925 392 aaPredicted RBP16.69■□□□□ 0.26
MALAT1-217ENST00000620902 SPNS2Q8IVW8 549 aa16.68■□□□□ 0.26
MALAT1-217ENST00000620902 TK2O00142 265 aa16.67■□□□□ 0.26
MALAT1-217ENST00000620902 C6orf132Q5T0Z8 1188 aa16.67■□□□□ 0.26
MALAT1-217ENST00000620902 DMRTA1Q5VZB9 504 aa16.67■□□□□ 0.26
MALAT1-217ENST00000620902 OSBPP22059 807 aa16.66■□□□□ 0.26
MALAT1-217ENST00000620902 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
MALAT1-217ENST00000620902 SLC4A5Q9BY07 1137 aa16.65■□□□□ 0.26
MALAT1-217ENST00000620902 PPP1R3GB7ZBB8 358 aa16.64■□□□□ 0.25
MALAT1-217ENST00000620902 SEMA3EO15041 775 aa16.64■□□□□ 0.25
MALAT1-217ENST00000620902 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
MALAT1-217ENST00000620902 MAP3K7O43318 606 aa16.63■□□□□ 0.25
MALAT1-217ENST00000620902 MLLT3P42568 568 aaPredicted RBP16.63■□□□□ 0.25
MALAT1-217ENST00000620902 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
MALAT1-217ENST00000620902 ADGRD1Q6QNK2 874 aa16.62■□□□□ 0.25
MALAT1-217ENST00000620902 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
MALAT1-217ENST00000620902 ZBED2Q9BTP6 218 aa16.59■□□□□ 0.25
MALAT1-217ENST00000620902 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
MALAT1-217ENST00000620902 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
MALAT1-217ENST00000620902 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
MALAT1-217ENST00000620902 COL9A1P20849 921 aa16.57■□□□□ 0.24
MALAT1-217ENST00000620902 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
MALAT1-217ENST00000620902 VPS9D1Q9Y2B5 631 aa16.57■□□□□ 0.24
MALAT1-217ENST00000620902 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
MALAT1-217ENST00000620902 TSR1Q2NL82 804 aaKnown RBP16.56■□□□□ 0.24
MALAT1-217ENST00000620902 PLSCR2Q9NRY7 297 aa16.56■□□□□ 0.24
MALAT1-217ENST00000620902 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
MALAT1-217ENST00000620902 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
MALAT1-217ENST00000620902 HRO43593 1189 aa16.52■□□□□ 0.24
MALAT1-217ENST00000620902 MMRN1Q13201 1228 aa16.52■□□□□ 0.24
MALAT1-217ENST00000620902 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
MALAT1-217ENST00000620902 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
MALAT1-217ENST00000620902 CFTRP13569 1480 aa16.5■□□□□ 0.23
MALAT1-217ENST00000620902 KDM6BO15054 1643 aa16.5■□□□□ 0.23
MALAT1-217ENST00000620902 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
MALAT1-217ENST00000620902 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
MALAT1-217ENST00000620902 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
MALAT1-217ENST00000620902 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
MALAT1-217ENST00000620902 RABGEF1Q9UJ41 708 aa16.46■□□□□ 0.23
MALAT1-217ENST00000620902 BHMG1C9JSJ3 638 aaPredicted RBP16.45■□□□□ 0.22
MALAT1-217ENST00000620902 PROX2Q3B8N5 592 aa16.45■□□□□ 0.22
MALAT1-217ENST00000620902 CDHR5Q9HBB8 845 aa16.44■□□□□ 0.22
MALAT1-217ENST00000620902 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
MALAT1-217ENST00000620902 PRSS12P56730 875 aa16.43■□□□□ 0.22
MALAT1-217ENST00000620902 NBPF3Q9H094 633 aa16.43■□□□□ 0.22
MALAT1-217ENST00000620902 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
MALAT1-217ENST00000620902 CDCA7LQ96GN5 454 aa16.41■□□□□ 0.22
MALAT1-217ENST00000620902 NPDC1Q9NQX5 325 aaPredicted RBP16.41■□□□□ 0.22
MALAT1-217ENST00000620902 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms