RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 EXOC6Q8TAG9 804 aa26.18■■□□□ 1.78
PDLIM3-212ENST00000620787 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
PDLIM3-212ENST00000620787 TRPM1Q7Z4N2 1603 aa26.16■■□□□ 1.78
PDLIM3-212ENST00000620787 RCAN3Q9UKA8 241 aa26.15■■□□□ 1.78
PDLIM3-212ENST00000620787 PARD3Q8TEW0 1356 aa26.15■■□□□ 1.78
PDLIM3-212ENST00000620787 DCAF11Q8TEB1 546 aa26.14■■□□□ 1.77
PDLIM3-212ENST00000620787 TCERG1O14776 1098 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-212ENST00000620787 ABCA8O94911 1581 aa26.12■■□□□ 1.77
PDLIM3-212ENST00000620787 NLRP13Q86W25 1043 aa26.11■■□□□ 1.77
PDLIM3-212ENST00000620787 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
PDLIM3-212ENST00000620787 ARHGEF5Q12774 1597 aa26.1■■□□□ 1.77
PDLIM3-212ENST00000620787 PDE3BQ13370 1112 aa26.1■■□□□ 1.77
PDLIM3-212ENST00000620787 RTL5Q5HYW3 569 aaPredicted RBP26.09■■□□□ 1.77
PDLIM3-212ENST00000620787 CARMIL2Q6F5E8 1435 aa26.08■■□□□ 1.77
PDLIM3-212ENST00000620787 PRAG1Q86YV5 1406 aa26.07■■□□□ 1.76
PDLIM3-212ENST00000620787 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
PDLIM3-212ENST00000620787 FAM135AQ9P2D6 1515 aa26.06■■□□□ 1.76
PDLIM3-212ENST00000620787 SALL2Q9Y467 1007 aaPredicted RBP26.05■■□□□ 1.76
PDLIM3-212ENST00000620787 TSPY4P0CV99 314 aa26.05■■□□□ 1.76
PDLIM3-212ENST00000620787 TSPY10P0CW01 314 aa26.05■■□□□ 1.76
PDLIM3-212ENST00000620787 PDE4AP27815 886 aa26.05■■□□□ 1.76
PDLIM3-212ENST00000620787 ATP10BO94823 1461 aa26.04■■□□□ 1.76
PDLIM3-212ENST00000620787 PLEKHD1A6NEE1 506 aa26.04■■□□□ 1.76
PDLIM3-212ENST00000620787 PER1O15534 1290 aaPredicted RBP26.03■■□□□ 1.76
PDLIM3-212ENST00000620787 LAMC1P11047 1609 aa26.03■■□□□ 1.76
PDLIM3-212ENST00000620787 MS4A1P11836 297 aa26.03■■□□□ 1.76
PDLIM3-212ENST00000620787 BACH2Q9BYV9 841 aa26.03■■□□□ 1.76
PDLIM3-212ENST00000620787 NPM2Q86SE8 214 aaKnown RBP26.02■■□□□ 1.76
PDLIM3-212ENST00000620787 COL17A1Q9UMD9 1497 aaPredicted RBP26.01■■□□□ 1.76
PDLIM3-212ENST00000620787 ZMYM4Q5VZL5 1548 aa26.01■■□□□ 1.75
PDLIM3-212ENST00000620787 BLMP54132 1417 aaPredicted RBP26.01■■□□□ 1.75
PDLIM3-212ENST00000620787 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
PDLIM3-212ENST00000620787 NUP160Q12769 1436 aa26■■□□□ 1.75
PDLIM3-212ENST00000620787 CDCA7LQ96GN5 454 aa26■■□□□ 1.75
PDLIM3-212ENST00000620787 INSRP06213 1382 aa26■■□□□ 1.75
PDLIM3-212ENST00000620787 GPRASP1Q5JY77 1395 aa25.99■■□□□ 1.75
PDLIM3-212ENST00000620787 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
PDLIM3-212ENST00000620787 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
PDLIM3-212ENST00000620787 PRDM15P57071 1507 aaPredicted RBP25.98■■□□□ 1.75
PDLIM3-212ENST00000620787 SAMD9LQ8IVG5 1584 aa25.97■■□□□ 1.75
PDLIM3-212ENST00000620787 MYO5CQ9NQX4 1742 aa25.97■■□□□ 1.75
PDLIM3-212ENST00000620787 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
PDLIM3-212ENST00000620787 CCDC144AA2RUR9 1427 aa25.96■■□□□ 1.75
PDLIM3-212ENST00000620787 CCDC141Q6ZP82 1450 aa25.96■■□□□ 1.75
PDLIM3-212ENST00000620787 NBPF1Q3BBV0 1214 aa25.95■■□□□ 1.74
PDLIM3-212ENST00000620787 A2MP01023 1474 aa25.95■■□□□ 1.74
PDLIM3-212ENST00000620787 WASHC2CQ9Y4E1 1318 aa25.94■■□□□ 1.74
PDLIM3-212ENST00000620787 UNC13BO14795 1591 aa25.94■■□□□ 1.74
PDLIM3-212ENST00000620787 PREX2Q70Z35 1606 aa25.93■■□□□ 1.74
PDLIM3-212ENST00000620787 DISP3Q9P2K9 1392 aa25.93■■□□□ 1.74
PDLIM3-212ENST00000620787 PLA2R1Q13018 1463 aa25.92■■□□□ 1.74
PDLIM3-212ENST00000620787 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
PDLIM3-212ENST00000620787 PLIN1O60240 522 aa25.91■■□□□ 1.74
PDLIM3-212ENST00000620787 TESK2Q96S53 571 aa25.91■■□□□ 1.74
PDLIM3-212ENST00000620787 EIF2AK4Q9P2K8 1649 aaKnown RBP25.89■■□□□ 1.74
PDLIM3-212ENST00000620787 CC2D1BQ5T0F9 858 aaKnown RBP25.89■■□□□ 1.74
PDLIM3-212ENST00000620787 FBLN2P98095 1184 aa25.88■■□□□ 1.73
PDLIM3-212ENST00000620787 CRBNQ96SW2 442 aa25.88■■□□□ 1.73
PDLIM3-212ENST00000620787 LAS1LQ9Y4W2 734 aaKnown RBP25.88■■□□□ 1.73
PDLIM3-212ENST00000620787 ERBINQ96RT1 1412 aa25.87■■□□□ 1.73
PDLIM3-212ENST00000620787 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
PDLIM3-212ENST00000620787 USP35Q9P2H5 1018 aa25.86■■□□□ 1.73
PDLIM3-212ENST00000620787 MAST1Q9Y2H9 1570 aa25.85■■□□□ 1.73
PDLIM3-212ENST00000620787 PANK3Q9H999 370 aa25.85■■□□□ 1.73
PDLIM3-212ENST00000620787 IQGAP3Q86VI3 1631 aa25.85■■□□□ 1.73
PDLIM3-212ENST00000620787 NEFMP07197 916 aa25.84■■□□□ 1.73
PDLIM3-212ENST00000620787 RNF17Q9BXT8 1623 aaKnown RBP25.82■■□□□ 1.72
PDLIM3-212ENST00000620787 SKAP1Q86WV1 359 aa25.82■■□□□ 1.72
PDLIM3-212ENST00000620787 SYCP2Q9BX26 1530 aa25.81■■□□□ 1.72
PDLIM3-212ENST00000620787 PPM1GO15355 546 aaPredicted RBP25.8■■□□□ 1.72
PDLIM3-212ENST00000620787 RSPH4AQ5TD94 716 aa25.8■■□□□ 1.72
PDLIM3-212ENST00000620787 PLXNC1O60486 1568 aa25.77■■□□□ 1.72
PDLIM3-212ENST00000620787 C20orf194Q5TEA3 1177 aa25.77■■□□□ 1.72
PDLIM3-212ENST00000620787 KDM2BQ8NHM5 1336 aa25.77■■□□□ 1.72
PDLIM3-212ENST00000620787 TMF1P82094 1093 aa25.76■■□□□ 1.71
PDLIM3-212ENST00000620787 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
PDLIM3-212ENST00000620787 DDRGK1Q96HY6 314 aa25.76■■□□□ 1.71
PDLIM3-212ENST00000620787 ATP10AO60312 1499 aa25.75■■□□□ 1.71
PDLIM3-212ENST00000620787 ADAMTS8Q9UP79 889 aa25.74■■□□□ 1.71
PDLIM3-212ENST00000620787 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
PDLIM3-212ENST00000620787 WDR7Q9Y4E6 1490 aa25.72■■□□□ 1.71
PDLIM3-212ENST00000620787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.72■■□□□ 1.71
PDLIM3-212ENST00000620787 MAGI2Q86UL8 1455 aa25.71■■□□□ 1.71
PDLIM3-212ENST00000620787 PLEKHH1Q9ULM0 1364 aa25.71■■□□□ 1.71
PDLIM3-212ENST00000620787 IL27Q8NEV9 243 aa25.71■■□□□ 1.71
PDLIM3-212ENST00000620787 IQGAP1P46940 1657 aa25.7■■□□□ 1.71
PDLIM3-212ENST00000620787 ARHGAP5Q13017 1502 aa25.7■■□□□ 1.7
PDLIM3-212ENST00000620787 DUSP27Q5VZP5 1158 aa25.68■■□□□ 1.7
PDLIM3-212ENST00000620787 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
PDLIM3-212ENST00000620787 CENPQQ7L2Z9 268 aaPredicted RBP25.67■■□□□ 1.7
PDLIM3-212ENST00000620787 ZNF521Q96K83 1311 aa25.67■■□□□ 1.7
PDLIM3-212ENST00000620787 MADDQ8WXG6 1647 aa25.66■■□□□ 1.7
PDLIM3-212ENST00000620787 PPP2R1AP30153 589 aa25.66■■□□□ 1.7
PDLIM3-212ENST00000620787 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.66■■□□□ 1.7
PDLIM3-212ENST00000620787 DUOX2Q9NRD8 1548 aa25.66■■□□□ 1.7
PDLIM3-212ENST00000620787 SYNMO15061 1565 aa25.64■■□□□ 1.7
PDLIM3-212ENST00000620787 WDR43Q15061 677 aaKnown RBP eCLIP25.61■■□□□ 1.69
PDLIM3-212ENST00000620787 AMER1Q5JTC6 1135 aaPredicted RBP25.61■■□□□ 1.69
PDLIM3-212ENST00000620787 MYOM1P52179 1685 aa25.6■■□□□ 1.69
PDLIM3-212ENST00000620787 C8orf34Q49A92 452 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms