RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
SKP2-209ENST00000620197 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
SKP2-209ENST00000620197 MAGI2Q86UL8 1455 aa17.78■□□□□ 0.44
SKP2-209ENST00000620197 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.44
SKP2-209ENST00000620197 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
SKP2-209ENST00000620197 PLA2R1Q13018 1463 aa17.75■□□□□ 0.43
SKP2-209ENST00000620197 EIF2AK4Q9P2K8 1649 aaKnown RBP17.74■□□□□ 0.43
SKP2-209ENST00000620197 ATP10AO60312 1499 aa17.74■□□□□ 0.43
SKP2-209ENST00000620197 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
SKP2-209ENST00000620197 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
SKP2-209ENST00000620197 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
SKP2-209ENST00000620197 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
SKP2-209ENST00000620197 NUP155O75694 1391 aa17.73■□□□□ 0.43
SKP2-209ENST00000620197 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
SKP2-209ENST00000620197 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
SKP2-209ENST00000620197 A2MP01023 1474 aa17.7■□□□□ 0.42
SKP2-209ENST00000620197 TTC37Q6PGP7 1564 aa17.7■□□□□ 0.42
SKP2-209ENST00000620197 RALBP1Q15311 655 aa17.69■□□□□ 0.42
SKP2-209ENST00000620197 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
SKP2-209ENST00000620197 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
SKP2-209ENST00000620197 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
SKP2-209ENST00000620197 ST20-MTHFSA0A0A6YYL1 179 aa17.65■□□□□ 0.42
SKP2-209ENST00000620197 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
SKP2-209ENST00000620197 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.42
SKP2-209ENST00000620197 NOP58Q9Y2X3 529 aaKnown RBP17.64■□□□□ 0.42
SKP2-209ENST00000620197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
SKP2-209ENST00000620197 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
SKP2-209ENST00000620197 MADDQ8WXG6 1647 aa17.63■□□□□ 0.41
SKP2-209ENST00000620197 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
SKP2-209ENST00000620197 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
SKP2-209ENST00000620197 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
SKP2-209ENST00000620197 MYOM1P52179 1685 aa17.62■□□□□ 0.41
SKP2-209ENST00000620197 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
SKP2-209ENST00000620197 CEP152O94986 1710 aa17.61■□□□□ 0.41
SKP2-209ENST00000620197 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
SKP2-209ENST00000620197 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
SKP2-209ENST00000620197 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
SKP2-209ENST00000620197 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
SKP2-209ENST00000620197 PDE3BQ13370 1112 aa17.59■□□□□ 0.41
SKP2-209ENST00000620197 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
SKP2-209ENST00000620197 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
SKP2-209ENST00000620197 TESK2Q96S53 571 aa17.59■□□□□ 0.41
SKP2-209ENST00000620197 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
SKP2-209ENST00000620197 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.41
SKP2-209ENST00000620197 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
SKP2-209ENST00000620197 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.41
SKP2-209ENST00000620197 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.41
SKP2-209ENST00000620197 CHD1O14646 1710 aa17.58■□□□□ 0.4
SKP2-209ENST00000620197 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
SKP2-209ENST00000620197 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
SKP2-209ENST00000620197 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
SKP2-209ENST00000620197 NEURL4Q96JN8 1562 aa17.56■□□□□ 0.4
SKP2-209ENST00000620197 DISP3Q9P2K9 1392 aa17.56■□□□□ 0.4
SKP2-209ENST00000620197 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
SKP2-209ENST00000620197 KIAA1210Q9ULL0 1709 aa17.56■□□□□ 0.4
SKP2-209ENST00000620197 SYNMO15061 1565 aa17.56■□□□□ 0.4
SKP2-209ENST00000620197 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
SKP2-209ENST00000620197 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
SKP2-209ENST00000620197 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
SKP2-209ENST00000620197 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
SKP2-209ENST00000620197 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
SKP2-209ENST00000620197 TSPY4P0CV99 314 aa17.53■□□□□ 0.4
SKP2-209ENST00000620197 TSPY10P0CW01 314 aa17.53■□□□□ 0.4
SKP2-209ENST00000620197 TRPM2O94759 1503 aa17.51■□□□□ 0.39
SKP2-209ENST00000620197 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
SKP2-209ENST00000620197 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
SKP2-209ENST00000620197 ABCC1P33527 1531 aa17.5■□□□□ 0.39
SKP2-209ENST00000620197 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
SKP2-209ENST00000620197 TCERG1O14776 1098 aaKnown RBP17.5■□□□□ 0.39
SKP2-209ENST00000620197 EXOC6Q8TAG9 804 aa17.5■□□□□ 0.39
SKP2-209ENST00000620197 ARHGAP5Q13017 1502 aa17.5■□□□□ 0.39
SKP2-209ENST00000620197 MS4A1P11836 297 aa17.49■□□□□ 0.39
SKP2-209ENST00000620197 NBPF1Q3BBV0 1214 aa17.49■□□□□ 0.39
SKP2-209ENST00000620197 VWDEQ8N2E2 1590 aa17.49■□□□□ 0.39
SKP2-209ENST00000620197 IFT172Q9UG01 1749 aa17.48■□□□□ 0.39
SKP2-209ENST00000620197 SCAPERQ9BY12 1400 aa17.46■□□□□ 0.39
SKP2-209ENST00000620197 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
SKP2-209ENST00000620197 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
SKP2-209ENST00000620197 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
SKP2-209ENST00000620197 ZCCHC11Q5TAX3 1644 aaKnown RBP17.45■□□□□ 0.38
SKP2-209ENST00000620197 ARAP3Q8WWN8 1544 aa17.45■□□□□ 0.38
SKP2-209ENST00000620197 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
SKP2-209ENST00000620197 ZNF521Q96K83 1311 aa17.45■□□□□ 0.38
SKP2-209ENST00000620197 PTPRTO14522 1441 aa17.44■□□□□ 0.38
SKP2-209ENST00000620197 TET3O43151 1660 aa17.44■□□□□ 0.38
SKP2-209ENST00000620197 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
SKP2-209ENST00000620197 MYO3AQ8NEV4 1616 aa17.44■□□□□ 0.38
SKP2-209ENST00000620197 ERCC6L2Q5T890 1561 aa17.43■□□□□ 0.38
SKP2-209ENST00000620197 KDM2BQ8NHM5 1336 aa17.42■□□□□ 0.38
SKP2-209ENST00000620197 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
SKP2-209ENST00000620197 NBR1Q14596 966 aa17.42■□□□□ 0.38
SKP2-209ENST00000620197 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
SKP2-209ENST00000620197 KDM5AP29375 1690 aaKnown RBP17.41■□□□□ 0.38
SKP2-209ENST00000620197 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
SKP2-209ENST00000620197 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
SKP2-209ENST00000620197 PDE4AP27815 886 aa17.4■□□□□ 0.38
SKP2-209ENST00000620197 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
SKP2-209ENST00000620197 PLCH2O75038 1416 aa17.4■□□□□ 0.38
SKP2-209ENST00000620197 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
SKP2-209ENST00000620197 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms