RNA–Protein interactions for RNA: ENST00000619914.1

SYNRG-226, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-226ENST00000619914 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
SYNRG-226ENST00000619914 PRKRIP1Q9H875 184 aaPredicted RBP11.59□□□□□ -0.55
SYNRG-226ENST00000619914 MBD5Q9P267 1494 aa11.59□□□□□ -0.55
SYNRG-226ENST00000619914 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
SYNRG-226ENST00000619914 RBM19Q9Y4C8 960 aaKnown RBP11.59□□□□□ -0.55
SYNRG-226ENST00000619914 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
SYNRG-226ENST00000619914 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
SYNRG-226ENST00000619914 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
SYNRG-226ENST00000619914 GPATCH8Q9UKJ3 1502 aaKnown RBP11.57□□□□□ -0.56
SYNRG-226ENST00000619914 KIF14Q15058 1648 aa11.57□□□□□ -0.56
SYNRG-226ENST00000619914 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
SYNRG-226ENST00000619914 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
SYNRG-226ENST00000619914 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
SYNRG-226ENST00000619914 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
SYNRG-226ENST00000619914 ZBED9Q6R2W3 1325 aa11.55□□□□□ -0.56
SYNRG-226ENST00000619914 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
SYNRG-226ENST00000619914 CFDP1Q9UEE9 299 aaPredicted RBP11.55□□□□□ -0.56
SYNRG-226ENST00000619914 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
SYNRG-226ENST00000619914 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
SYNRG-226ENST00000619914 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
SYNRG-226ENST00000619914 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
SYNRG-226ENST00000619914 KCNA4P22459 653 aa11.53□□□□□ -0.56
SYNRG-226ENST00000619914 CCDC184Q52MB2 194 aa11.52□□□□□ -0.56
SYNRG-226ENST00000619914 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.56
SYNRG-226ENST00000619914 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.57
SYNRG-226ENST00000619914 KDM5CP41229 1560 aa11.52□□□□□ -0.57
SYNRG-226ENST00000619914 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
SYNRG-226ENST00000619914 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.57
SYNRG-226ENST00000619914 ARHGEF12Q9NZN5 1544 aa11.51□□□□□ -0.57
SYNRG-226ENST00000619914 ABCA8O94911 1581 aa11.5□□□□□ -0.57
SYNRG-226ENST00000619914 FAM9BQ8IZU0 186 aa11.5□□□□□ -0.57
SYNRG-226ENST00000619914 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
SYNRG-226ENST00000619914 ANKRD50Q9ULJ7 1429 aa11.5□□□□□ -0.57
SYNRG-226ENST00000619914 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
SYNRG-226ENST00000619914 ROCK2O75116 1388 aaKnown RBP11.49□□□□□ -0.57
SYNRG-226ENST00000619914 DHX29Q7Z478 1369 aaKnown RBP11.49□□□□□ -0.57
SYNRG-226ENST00000619914 USP47Q96K76 1375 aa11.49□□□□□ -0.57
SYNRG-226ENST00000619914 YEATS2Q9ULM3 1422 aa11.49□□□□□ -0.57
SYNRG-226ENST00000619914 NEO1Q92859 1461 aa11.48□□□□□ -0.57
SYNRG-226ENST00000619914 ARHGEF5Q12774 1597 aa11.47□□□□□ -0.57
SYNRG-226ENST00000619914 IRX6P78412 446 aaPredicted RBP11.47□□□□□ -0.57
SYNRG-226ENST00000619914 PKD2Q13563 968 aa11.47□□□□□ -0.57
SYNRG-226ENST00000619914 C9orf84Q5VXU9 1444 aa11.47□□□□□ -0.57
SYNRG-226ENST00000619914 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
SYNRG-226ENST00000619914 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.58
SYNRG-226ENST00000619914 FANCAO15360 1455 aa11.46□□□□□ -0.58
SYNRG-226ENST00000619914 PLEKHD1A6NEE1 506 aa11.45□□□□□ -0.58
SYNRG-226ENST00000619914 ARHGEF40Q8TER5 1519 aa11.44□□□□□ -0.58
SYNRG-226ENST00000619914 ATP10BO94823 1461 aa11.44□□□□□ -0.58
SYNRG-226ENST00000619914 ABCA9Q8IUA7 1624 aa11.43□□□□□ -0.58
SYNRG-226ENST00000619914 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
SYNRG-226ENST00000619914 NUP155O75694 1391 aa11.43□□□□□ -0.58
SYNRG-226ENST00000619914 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
SYNRG-226ENST00000619914 MLECQ14165 292 aa11.43□□□□□ -0.58
SYNRG-226ENST00000619914 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
SYNRG-226ENST00000619914 E9PCH4 1651 aa11.42□□□□□ -0.58
SYNRG-226ENST00000619914 PREX1Q8TCU6 1659 aa11.42□□□□□ -0.58
SYNRG-226ENST00000619914 KIF15Q9NS87 1388 aa11.41□□□□□ -0.58
SYNRG-226ENST00000619914 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
SYNRG-226ENST00000619914 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
SYNRG-226ENST00000619914 NUDCQ9Y266 331 aa11.41□□□□□ -0.58
SYNRG-226ENST00000619914 RNF123Q5XPI4 1314 aa11.4□□□□□ -0.58
SYNRG-226ENST00000619914 PREX2Q70Z35 1606 aa11.4□□□□□ -0.58
SYNRG-226ENST00000619914 PTPRTO14522 1441 aa11.4□□□□□ -0.58
SYNRG-226ENST00000619914 FER1L4A9Z1Z3 1794 aa11.4□□□□□ -0.58
SYNRG-226ENST00000619914 STRCQ7RTU9 1775 aa11.4□□□□□ -0.58
SYNRG-226ENST00000619914 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.59
SYNRG-226ENST00000619914 TTC37Q6PGP7 1564 aa11.39□□□□□ -0.59
SYNRG-226ENST00000619914 CCDC141Q6ZP82 1450 aa11.39□□□□□ -0.59
SYNRG-226ENST00000619914 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
SYNRG-226ENST00000619914 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
SYNRG-226ENST00000619914 MAST1Q9Y2H9 1570 aa11.39□□□□□ -0.59
SYNRG-226ENST00000619914 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
SYNRG-226ENST00000619914 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
SYNRG-226ENST00000619914 BRD4O60885 1362 aaPredicted RBP11.38□□□□□ -0.59
SYNRG-226ENST00000619914 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
SYNRG-226ENST00000619914 RALBP1Q15311 655 aa11.37□□□□□ -0.59
SYNRG-226ENST00000619914 LAMC1P11047 1609 aa11.37□□□□□ -0.59
SYNRG-226ENST00000619914 UNC13BO14795 1591 aa11.37□□□□□ -0.59
SYNRG-226ENST00000619914 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
SYNRG-226ENST00000619914 SETD1BQ9UPS6 1966 aaKnown RBP11.37□□□□□ -0.59
SYNRG-226ENST00000619914 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
SYNRG-226ENST00000619914 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
SYNRG-226ENST00000619914 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
SYNRG-226ENST00000619914 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
SYNRG-226ENST00000619914 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
SYNRG-226ENST00000619914 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
SYNRG-226ENST00000619914 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
SYNRG-226ENST00000619914 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
SYNRG-226ENST00000619914 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
SYNRG-226ENST00000619914 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
SYNRG-226ENST00000619914 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
SYNRG-226ENST00000619914 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
SYNRG-226ENST00000619914 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
SYNRG-226ENST00000619914 MAGI2Q86UL8 1455 aa11.34□□□□□ -0.59
SYNRG-226ENST00000619914 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNRG-226ENST00000619914 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
SYNRG-226ENST00000619914 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
SYNRG-226ENST00000619914 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
SYNRG-226ENST00000619914 EIF2AK4Q9P2K8 1649 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms