RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
RDM1-223ENST00000619193 RAPGEF6Q8TEU7 1601 aa8.4□□□□□ -1.06
RDM1-223ENST00000619193 IQSEC2Q5JU85 1478 aa8.4□□□□□ -1.06
RDM1-223ENST00000619193 RPRD2Q5VT52 1461 aaKnown RBP8.4□□□□□ -1.06
RDM1-223ENST00000619193 ABCB7O75027 752 aa8.4□□□□□ -1.06
RDM1-223ENST00000619193 CROCC2H7BZ55 1655 aa8.4□□□□□ -1.07
RDM1-223ENST00000619193 CNTLNQ9NXG0 1405 aa8.39□□□□□ -1.07
RDM1-223ENST00000619193 RAPGEF3O95398 923 aa8.39□□□□□ -1.07
RDM1-223ENST00000619193 ARHGEF40Q8TER5 1519 aa8.39□□□□□ -1.07
RDM1-223ENST00000619193 ADGRL2O95490 1459 aa8.38□□□□□ -1.07
RDM1-223ENST00000619193 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
RDM1-223ENST00000619193 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
RDM1-223ENST00000619193 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
RDM1-223ENST00000619193 HSPA5P11021 654 aaKnown RBP8.38□□□□□ -1.07
RDM1-223ENST00000619193 HSPA1LP34931 641 aa8.38□□□□□ -1.07
RDM1-223ENST00000619193 TTC37Q6PGP7 1564 aa8.38□□□□□ -1.07
RDM1-223ENST00000619193 ADGBQ8N7X0 1667 aa8.37□□□□□ -1.07
RDM1-223ENST00000619193 RRP7BPQ9NSQ0 103 aa8.37□□□□□ -1.07
RDM1-223ENST00000619193 SETD1AO15047 1707 aaKnown RBP8.37□□□□□ -1.07
RDM1-223ENST00000619193 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
RDM1-223ENST00000619193 ANP32CO43423 234 aa8.36□□□□□ -1.07
RDM1-223ENST00000619193 FKBP8Q14318 412 aa8.36□□□□□ -1.07
RDM1-223ENST00000619193 NBPF8Q3BBV2 869 aa8.36□□□□□ -1.07
RDM1-223ENST00000619193 PTPRTO14522 1441 aa8.36□□□□□ -1.07
RDM1-223ENST00000619193 KIF14Q15058 1648 aa8.36□□□□□ -1.07
RDM1-223ENST00000619193 CCDC184Q52MB2 194 aa8.35□□□□□ -1.07
RDM1-223ENST00000619193 MPHOSPH9Q99550 1183 aa8.35□□□□□ -1.07
RDM1-223ENST00000619193 GPATCH8Q9UKJ3 1502 aaKnown RBP8.34□□□□□ -1.07
RDM1-223ENST00000619193 L3MBTL2Q969R5 705 aa8.34□□□□□ -1.07
RDM1-223ENST00000619193 TROQ12816 1431 aaPredicted RBP8.34□□□□□ -1.07
RDM1-223ENST00000619193 CDC42BPAQ5VT25 1732 aa8.34□□□□□ -1.07
RDM1-223ENST00000619193 KDM5DQ9BY66 1539 aa8.34□□□□□ -1.08
RDM1-223ENST00000619193 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.08
RDM1-223ENST00000619193 CAMSAP2Q08AD1 1489 aa8.33□□□□□ -1.08
RDM1-223ENST00000619193 ABCA8O94911 1581 aa8.33□□□□□ -1.08
RDM1-223ENST00000619193 CEBPAP49715 358 aaPredicted RBP8.33□□□□□ -1.08
RDM1-223ENST00000619193 POLA2Q14181 598 aa8.33□□□□□ -1.08
RDM1-223ENST00000619193 CARMIL2Q6F5E8 1435 aa8.33□□□□□ -1.08
RDM1-223ENST00000619193 BCANQ96GW7 911 aa8.33□□□□□ -1.08
RDM1-223ENST00000619193 RGS17Q9UGC6 210 aaPredicted RBP8.33□□□□□ -1.08
RDM1-223ENST00000619193 DHX29Q7Z478 1369 aaKnown RBP8.33□□□□□ -1.08
RDM1-223ENST00000619193 TRIM52Q96A61 297 aa8.32□□□□□ -1.08
RDM1-223ENST00000619193 CHIC2Q9UKJ5 165 aa8.32□□□□□ -1.08
RDM1-223ENST00000619193 ZNF335Q9H4Z2 1342 aaPredicted RBP8.31□□□□□ -1.08
RDM1-223ENST00000619193 ZNF644Q9H582 1327 aaPredicted RBP8.31□□□□□ -1.08
RDM1-223ENST00000619193 KDM5CP41229 1560 aa8.31□□□□□ -1.08
RDM1-223ENST00000619193 MLECQ14165 292 aa8.31□□□□□ -1.08
RDM1-223ENST00000619193 UHRF1BP1Q6BDS2 1440 aa8.3□□□□□ -1.08
RDM1-223ENST00000619193 ANP32EQ9BTT0 268 aa8.3□□□□□ -1.08
RDM1-223ENST00000619193 SHANK2Q9UPX8 1470 aa8.3□□□□□ -1.08
RDM1-223ENST00000619193 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
RDM1-223ENST00000619193 E9PCH4 1651 aa8.29□□□□□ -1.08
RDM1-223ENST00000619193 RICTORQ6R327 1708 aa8.29□□□□□ -1.08
RDM1-223ENST00000619193 KIAA1107Q9UPP5 1409 aa8.29□□□□□ -1.08
RDM1-223ENST00000619193 KIF7Q2M1P5 1343 aa8.29□□□□□ -1.08
RDM1-223ENST00000619193 FANCAO15360 1455 aa8.28□□□□□ -1.08
RDM1-223ENST00000619193 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.08
RDM1-223ENST00000619193 PRKRIP1Q9H875 184 aaPredicted RBP8.28□□□□□ -1.08
RDM1-223ENST00000619193 RBM19Q9Y4C8 960 aaKnown RBP8.28□□□□□ -1.08
RDM1-223ENST00000619193 RALGAPBQ86X10 1494 aa8.27□□□□□ -1.09
RDM1-223ENST00000619193 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
RDM1-223ENST00000619193 ARHGEF5Q12774 1597 aa8.27□□□□□ -1.09
RDM1-223ENST00000619193 RNF123Q5XPI4 1314 aa8.26□□□□□ -1.09
RDM1-223ENST00000619193 ABCA9Q8IUA7 1624 aa8.25□□□□□ -1.09
RDM1-223ENST00000619193 ALKQ9UM73 1620 aa8.25□□□□□ -1.09
RDM1-223ENST00000619193 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
RDM1-223ENST00000619193 POGZQ7Z3K3 1410 aa8.25□□□□□ -1.09
RDM1-223ENST00000619193 ATP10BO94823 1461 aa8.25□□□□□ -1.09
RDM1-223ENST00000619193 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.09
RDM1-223ENST00000619193 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
RDM1-223ENST00000619193 ZBED9Q6R2W3 1325 aa8.24□□□□□ -1.09
RDM1-223ENST00000619193 NEO1Q92859 1461 aa8.23□□□□□ -1.09
RDM1-223ENST00000619193 ZFYVE16Q7Z3T8 1539 aa8.23□□□□□ -1.09
RDM1-223ENST00000619193 MAST1Q9Y2H9 1570 aa8.22□□□□□ -1.09
RDM1-223ENST00000619193 SMG6Q86US8 1419 aaKnown RBP8.22□□□□□ -1.09
RDM1-223ENST00000619193 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
RDM1-223ENST00000619193 NEFLP07196 543 aa8.22□□□□□ -1.09
RDM1-223ENST00000619193 UNC13BO14795 1591 aa8.22□□□□□ -1.09
RDM1-223ENST00000619193 SAMD9LQ8IVG5 1584 aa8.22□□□□□ -1.09
RDM1-223ENST00000619193 C3P01024 1663 aa8.21□□□□□ -1.09
RDM1-223ENST00000619193 CDC42BPBQ9Y5S2 1711 aa8.21□□□□□ -1.09
RDM1-223ENST00000619193 ZMYM4Q5VZL5 1548 aa8.21□□□□□ -1.1
RDM1-223ENST00000619193 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
RDM1-223ENST00000619193 FANCIQ9NVI1 1328 aa8.21□□□□□ -1.1
RDM1-223ENST00000619193 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.1
RDM1-223ENST00000619193 PREX2Q70Z35 1606 aa8.21□□□□□ -1.1
RDM1-223ENST00000619193 USP47Q96K76 1375 aa8.21□□□□□ -1.1
RDM1-223ENST00000619193 C9orf84Q5VXU9 1444 aa8.2□□□□□ -1.1
RDM1-223ENST00000619193 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
RDM1-223ENST00000619193 LAMC1P11047 1609 aa8.2□□□□□ -1.1
RDM1-223ENST00000619193 TRPM1Q7Z4N2 1603 aa8.2□□□□□ -1.1
RDM1-223ENST00000619193 LRPPRCP42704 1394 aaKnown RBP8.2□□□□□ -1.1
RDM1-223ENST00000619193 PLA2R1Q13018 1463 aa8.19□□□□□ -1.1
RDM1-223ENST00000619193 NCKAP5LQ9HCH0 1330 aa8.19□□□□□ -1.1
RDM1-223ENST00000619193 ANKRD30AQ9BXX3 1397 aa8.19□□□□□ -1.1
RDM1-223ENST00000619193 IRX6P78412 446 aaPredicted RBP8.18□□□□□ -1.1
RDM1-223ENST00000619193 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
RDM1-223ENST00000619193 SETD1BQ9UPS6 1966 aaKnown RBP8.18□□□□□ -1.1
RDM1-223ENST00000619193 PKD2Q13563 968 aa8.17□□□□□ -1.1
RDM1-223ENST00000619193 MRS2Q9HD23 443 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms