RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
PCDHA4-204ENST00000618834 CHMP3Q9Y3E7 222 aa14.15□□□□□ -0.14
PCDHA4-204ENST00000618834 HOMER1Q86YM7 354 aa14.15□□□□□ -0.14
PCDHA4-204ENST00000618834 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
PCDHA4-204ENST00000618834 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
PCDHA4-204ENST00000618834 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 HDAC5Q9UQL6 1122 aa14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 CCDC191Q8NCU4 936 aa14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 CHMP4AQ9BY43 222 aa14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 CDR1P51861 262 aa14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 FAM43AQ8N2R8 423 aa14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 RDXP35241 583 aaKnown RBP14.14□□□□□ -0.15
PCDHA4-204ENST00000618834 CENPJQ9HC77 1338 aaPredicted RBP14.13□□□□□ -0.15
PCDHA4-204ENST00000618834 ANKRD20A12PQ8NF67 263 aa14.13□□□□□ -0.15
PCDHA4-204ENST00000618834 SOX12O15370 315 aa14.13□□□□□ -0.15
PCDHA4-204ENST00000618834 CHMP4CQ96CF2 233 aa14.13□□□□□ -0.15
PCDHA4-204ENST00000618834 PKNOX2Q96KN3 472 aa14.13□□□□□ -0.15
PCDHA4-204ENST00000618834 HSP90B2PQ58FF3 399 aa14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 FAM161AQ3B820 660 aa14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 HOOK1Q9UJC3 728 aaKnown RBP14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 U2AF1L5P0DN76 240 aaPredicted RBP14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 U2AF1Q01081 240 aaKnown RBP eCLIP14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 DCTN1Q14203 1278 aa14.12□□□□□ -0.15
PCDHA4-204ENST00000618834 CCDC66A2RUB6 948 aa14.11□□□□□ -0.15
PCDHA4-204ENST00000618834 MARCH6O60337 910 aa14.11□□□□□ -0.15
PCDHA4-204ENST00000618834 CENPQQ7L2Z9 268 aaPredicted RBP14.11□□□□□ -0.15
PCDHA4-204ENST00000618834 HDGFL2Q7Z4V5 671 aaPredicted RBP14.11□□□□□ -0.15
PCDHA4-204ENST00000618834 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
PCDHA4-204ENST00000618834 FAM184AQ8NB25 1140 aa14.1□□□□□ -0.15
PCDHA4-204ENST00000618834 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
PCDHA4-204ENST00000618834 H0YHG0 523 aa14.09□□□□□ -0.15
PCDHA4-204ENST00000618834 TMX4Q9H1E5 349 aaPredicted RBP14.09□□□□□ -0.15
PCDHA4-204ENST00000618834 IFT57Q9NWB7 429 aa14.08□□□□□ -0.16
PCDHA4-204ENST00000618834 FANCIQ9NVI1 1328 aa14.08□□□□□ -0.16
PCDHA4-204ENST00000618834 MNS1Q8NEH6 495 aa14.08□□□□□ -0.16
PCDHA4-204ENST00000618834 FOXD4L6Q3SYB3 417 aaPredicted RBP14.08□□□□□ -0.16
PCDHA4-204ENST00000618834 FOXD4L3Q6VB84 417 aaPredicted RBP14.08□□□□□ -0.16
PCDHA4-204ENST00000618834 AKAP17AQ02040 695 aaKnown RBP14.07□□□□□ -0.16
PCDHA4-204ENST00000618834 CCDC39Q9UFE4 941 aa14.07□□□□□ -0.16
PCDHA4-204ENST00000618834 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
PCDHA4-204ENST00000618834 ZNF330Q9Y3S2 320 aaPredicted RBP14.06□□□□□ -0.16
PCDHA4-204ENST00000618834 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
PCDHA4-204ENST00000618834 TOMM22Q9NS69 142 aa14.06□□□□□ -0.16
PCDHA4-204ENST00000618834 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
PCDHA4-204ENST00000618834 PDE4AP27815 886 aa14.05□□□□□ -0.16
PCDHA4-204ENST00000618834 TCEAL9Q9UHQ7 104 aa14.05□□□□□ -0.16
PCDHA4-204ENST00000618834 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
PCDHA4-204ENST00000618834 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDHA4-204ENST00000618834 SLC4A10Q6U841 1118 aa14.04□□□□□ -0.16
PCDHA4-204ENST00000618834 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
PCDHA4-204ENST00000618834 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
PCDHA4-204ENST00000618834 NASPP49321 788 aaPredicted RBP14.03□□□□□ -0.16
PCDHA4-204ENST00000618834 REC8O95072 547 aa14.03□□□□□ -0.16
PCDHA4-204ENST00000618834 NAP1L1P55209 391 aaKnown RBP14.03□□□□□ -0.16
PCDHA4-204ENST00000618834 CAGE1Q8TC20 777 aa14.02□□□□□ -0.16
PCDHA4-204ENST00000618834 MYO6Q9UM54 1294 aa14.02□□□□□ -0.16
PCDHA4-204ENST00000618834 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
PCDHA4-204ENST00000618834 CGNL1Q0VF96 1302 aa14.02□□□□□ -0.17
PCDHA4-204ENST00000618834 RILPL2Q969X0 211 aa14.02□□□□□ -0.17
PCDHA4-204ENST00000618834 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
PCDHA4-204ENST00000618834 NAT10Q9H0A0 1025 aaKnown RBP14.01□□□□□ -0.17
PCDHA4-204ENST00000618834 LEKR1Q6ZMV7 388 aa14.01□□□□□ -0.17
PCDHA4-204ENST00000618834 TRIM29Q14134 588 aa14.01□□□□□ -0.17
PCDHA4-204ENST00000618834 ERCC4Q92889 916 aaPredicted RBP14.01□□□□□ -0.17
PCDHA4-204ENST00000618834 CCDC146Q8IYE0 955 aa14□□□□□ -0.17
PCDHA4-204ENST00000618834 BICD2Q8TD16 824 aa14□□□□□ -0.17
PCDHA4-204ENST00000618834 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
PCDHA4-204ENST00000618834 CCDC47Q96A33 483 aaKnown RBP14□□□□□ -0.17
PCDHA4-204ENST00000618834 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
PCDHA4-204ENST00000618834 SASS6Q6UVJ0 657 aa14□□□□□ -0.17
PCDHA4-204ENST00000618834 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
PCDHA4-204ENST00000618834 SYNE3Q6ZMZ3 975 aa13.98□□□□□ -0.17
PCDHA4-204ENST00000618834 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
PCDHA4-204ENST00000618834 ANKRD45Q5TZF3 282 aa13.98□□□□□ -0.17
PCDHA4-204ENST00000618834 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
PCDHA4-204ENST00000618834 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 R3HCC1Q9Y3T6 440 aaKnown RBP13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 RUFY2Q8WXA3 655 aa13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 CCP110O43303 1012 aa13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 CT47A1Q5JQC4 288 aaPredicted RBP13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 PLCD4Q9BRC7 762 aa13.97□□□□□ -0.17
PCDHA4-204ENST00000618834 G3V3G9 751 aa13.96□□□□□ -0.17
PCDHA4-204ENST00000618834 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
PCDHA4-204ENST00000618834 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
PCDHA4-204ENST00000618834 NLRP13Q86W25 1043 aa13.96□□□□□ -0.17
PCDHA4-204ENST00000618834 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.17
PCDHA4-204ENST00000618834 WWC1Q8IX03 1113 aa13.96□□□□□ -0.18
PCDHA4-204ENST00000618834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.96□□□□□ -0.18
PCDHA4-204ENST00000618834 STK26Q9P289 416 aa13.96□□□□□ -0.18
PCDHA4-204ENST00000618834 RRP1P56182 461 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 ZRSR2Q15696 482 aaKnown RBP13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 EPS15P42566 896 aa13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 ODF2Q5BJF6 829 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms