RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.39
KIF3A-208ENST00000618515 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
KIF3A-208ENST00000618515 BLMP54132 1417 aaPredicted RBP17.49■□□□□ 0.39
KIF3A-208ENST00000618515 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
KIF3A-208ENST00000618515 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
KIF3A-208ENST00000618515 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
KIF3A-208ENST00000618515 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
KIF3A-208ENST00000618515 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.39
KIF3A-208ENST00000618515 TMC1Q8TDI8 760 aa17.46■□□□□ 0.38
KIF3A-208ENST00000618515 BACH2Q9BYV9 841 aa17.46■□□□□ 0.38
KIF3A-208ENST00000618515 NUP160Q12769 1436 aa17.44■□□□□ 0.38
KIF3A-208ENST00000618515 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
KIF3A-208ENST00000618515 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
KIF3A-208ENST00000618515 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
KIF3A-208ENST00000618515 PRDM15P57071 1507 aaPredicted RBP17.43■□□□□ 0.38
KIF3A-208ENST00000618515 EIF2AK4Q9P2K8 1649 aaKnown RBP17.42■□□□□ 0.38
KIF3A-208ENST00000618515 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
KIF3A-208ENST00000618515 MAST1Q9Y2H9 1570 aa17.41■□□□□ 0.38
KIF3A-208ENST00000618515 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
KIF3A-208ENST00000618515 UNC13BO14795 1591 aa17.41■□□□□ 0.38
KIF3A-208ENST00000618515 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
KIF3A-208ENST00000618515 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
KIF3A-208ENST00000618515 ABCA8O94911 1581 aa17.41■□□□□ 0.38
KIF3A-208ENST00000618515 PKD2Q13563 968 aa17.41■□□□□ 0.38
KIF3A-208ENST00000618515 COL17A1Q9UMD9 1497 aaPredicted RBP17.4■□□□□ 0.38
KIF3A-208ENST00000618515 PDE4AP27815 886 aa17.4■□□□□ 0.38
KIF3A-208ENST00000618515 NBR1Q14596 966 aa17.39■□□□□ 0.37
KIF3A-208ENST00000618515 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.37
KIF3A-208ENST00000618515 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
KIF3A-208ENST00000618515 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
KIF3A-208ENST00000618515 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
KIF3A-208ENST00000618515 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
KIF3A-208ENST00000618515 ATP10AO60312 1499 aa17.36■□□□□ 0.37
KIF3A-208ENST00000618515 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
KIF3A-208ENST00000618515 PER1O15534 1290 aaPredicted RBP17.35■□□□□ 0.37
KIF3A-208ENST00000618515 EXOC6Q8TAG9 804 aa17.35■□□□□ 0.37
KIF3A-208ENST00000618515 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
KIF3A-208ENST00000618515 FAM135AQ9P2D6 1515 aa17.33■□□□□ 0.37
KIF3A-208ENST00000618515 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.36
KIF3A-208ENST00000618515 MYO5CQ9NQX4 1742 aa17.33■□□□□ 0.36
KIF3A-208ENST00000618515 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
KIF3A-208ENST00000618515 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
KIF3A-208ENST00000618515 NUP155O75694 1391 aa17.31■□□□□ 0.36
KIF3A-208ENST00000618515 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
KIF3A-208ENST00000618515 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
KIF3A-208ENST00000618515 PREX2Q70Z35 1606 aa17.31■□□□□ 0.36
KIF3A-208ENST00000618515 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
KIF3A-208ENST00000618515 PLXNC1O60486 1568 aa17.3■□□□□ 0.36
KIF3A-208ENST00000618515 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
KIF3A-208ENST00000618515 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
KIF3A-208ENST00000618515 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
KIF3A-208ENST00000618515 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
KIF3A-208ENST00000618515 CDC42BPBQ9Y5S2 1711 aa17.26■□□□□ 0.35
KIF3A-208ENST00000618515 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
KIF3A-208ENST00000618515 SAMD9LQ8IVG5 1584 aa17.25■□□□□ 0.35
KIF3A-208ENST00000618515 A2MP01023 1474 aa17.24■□□□□ 0.35
KIF3A-208ENST00000618515 NEFMP07197 916 aa17.24■□□□□ 0.35
KIF3A-208ENST00000618515 ATP10BO94823 1461 aa17.24■□□□□ 0.35
KIF3A-208ENST00000618515 SYNMO15061 1565 aa17.23■□□□□ 0.35
KIF3A-208ENST00000618515 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
KIF3A-208ENST00000618515 EIF3AQ14152 1382 aaKnown RBP17.22■□□□□ 0.35
KIF3A-208ENST00000618515 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
KIF3A-208ENST00000618515 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
KIF3A-208ENST00000618515 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
KIF3A-208ENST00000618515 ABCC2Q92887 1545 aa17.22■□□□□ 0.35
KIF3A-208ENST00000618515 TESK2Q96S53 571 aa17.21■□□□□ 0.35
KIF3A-208ENST00000618515 ZNF521Q96K83 1311 aa17.21■□□□□ 0.34
KIF3A-208ENST00000618515 NEURL4Q96JN8 1562 aa17.2■□□□□ 0.34
KIF3A-208ENST00000618515 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
KIF3A-208ENST00000618515 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
KIF3A-208ENST00000618515 KIAA1210Q9ULL0 1709 aa17.18■□□□□ 0.34
KIF3A-208ENST00000618515 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
KIF3A-208ENST00000618515 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
KIF3A-208ENST00000618515 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
KIF3A-208ENST00000618515 GSE1Q14687 1217 aa17.17■□□□□ 0.34
KIF3A-208ENST00000618515 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
KIF3A-208ENST00000618515 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
KIF3A-208ENST00000618515 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
KIF3A-208ENST00000618515 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
KIF3A-208ENST00000618515 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
KIF3A-208ENST00000618515 TRMT2AQ8IZ69 625 aaKnown RBP17.15■□□□□ 0.34
KIF3A-208ENST00000618515 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
KIF3A-208ENST00000618515 PLEKHD1A6NEE1 506 aa17.14■□□□□ 0.34
KIF3A-208ENST00000618515 FAM161AQ3B820 660 aa17.14■□□□□ 0.34
KIF3A-208ENST00000618515 NGEFQ8N5V2 710 aa17.14■□□□□ 0.34
KIF3A-208ENST00000618515 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.34
KIF3A-208ENST00000618515 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
KIF3A-208ENST00000618515 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
KIF3A-208ENST00000618515 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
KIF3A-208ENST00000618515 MYOM1P52179 1685 aa17.13■□□□□ 0.33
KIF3A-208ENST00000618515 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
KIF3A-208ENST00000618515 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
KIF3A-208ENST00000618515 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
KIF3A-208ENST00000618515 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms