RNA–Protein interactions for RNA: ENST00000618014.1

CCNA2-202, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-202ENST00000618014 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
CCNA2-202ENST00000618014 PARD3Q8TEW0 1356 aa21.08■□□□□ 0.96
CCNA2-202ENST00000618014 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
CCNA2-202ENST00000618014 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
CCNA2-202ENST00000618014 CARD11Q9BXL7 1154 aa21.06■□□□□ 0.96
CCNA2-202ENST00000618014 PKNOX2Q96KN3 472 aa21.05■□□□□ 0.96
CCNA2-202ENST00000618014 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
CCNA2-202ENST00000618014 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
CCNA2-202ENST00000618014 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
CCNA2-202ENST00000618014 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.95
CCNA2-202ENST00000618014 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.95
CCNA2-202ENST00000618014 C20orf194Q5TEA3 1177 aa21.01■□□□□ 0.95
CCNA2-202ENST00000618014 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
CCNA2-202ENST00000618014 RRAGDQ9NQL2 400 aaPredicted RBP21■□□□□ 0.95
CCNA2-202ENST00000618014 ARHGEF12Q9NZN5 1544 aa20.99■□□□□ 0.95
CCNA2-202ENST00000618014 L1TD1Q5T7N2 865 aaKnown RBP20.97■□□□□ 0.95
CCNA2-202ENST00000618014 PKD2Q13563 968 aa20.97■□□□□ 0.95
CCNA2-202ENST00000618014 POGKQ9P215 609 aa20.97■□□□□ 0.95
CCNA2-202ENST00000618014 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
CCNA2-202ENST00000618014 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
CCNA2-202ENST00000618014 ADGBQ8N7X0 1667 aa20.94■□□□□ 0.94
CCNA2-202ENST00000618014 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
CCNA2-202ENST00000618014 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
CCNA2-202ENST00000618014 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
CCNA2-202ENST00000618014 RGS3P49796 1198 aa20.9■□□□□ 0.94
CCNA2-202ENST00000618014 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.88■□□□□ 0.93
CCNA2-202ENST00000618014 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
CCNA2-202ENST00000618014 USP19O94966 1318 aa20.88■□□□□ 0.93
CCNA2-202ENST00000618014 ADGRL2O95490 1459 aa20.87■□□□□ 0.93
CCNA2-202ENST00000618014 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
CCNA2-202ENST00000618014 BECN1Q14457 450 aa20.86■□□□□ 0.93
CCNA2-202ENST00000618014 DUSP27Q5VZP5 1158 aa20.85■□□□□ 0.93
CCNA2-202ENST00000618014 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
CCNA2-202ENST00000618014 IQGAP2Q13576 1575 aa20.84■□□□□ 0.93
CCNA2-202ENST00000618014 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
CCNA2-202ENST00000618014 CAMSAP2Q08AD1 1489 aa20.83■□□□□ 0.92
CCNA2-202ENST00000618014 CLCN1P35523 988 aa20.82■□□□□ 0.92
CCNA2-202ENST00000618014 RRP9O43818 475 aaKnown RBP20.82■□□□□ 0.92
CCNA2-202ENST00000618014 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
CCNA2-202ENST00000618014 ZMYND15Q9H091 742 aa20.82■□□□□ 0.92
CCNA2-202ENST00000618014 PNNQ9H307 717 aaKnown RBP20.82■□□□□ 0.92
CCNA2-202ENST00000618014 CROCC2H7BZ55 1655 aa20.82■□□□□ 0.92
CCNA2-202ENST00000618014 VSIG10Q8N0Z9 540 aa20.81■□□□□ 0.92
CCNA2-202ENST00000618014 NAP1L5Q96NT1 182 aaPredicted RBP20.81■□□□□ 0.92
CCNA2-202ENST00000618014 EIF3AQ14152 1382 aaKnown RBP20.8■□□□□ 0.92
CCNA2-202ENST00000618014 HSP90AA2PQ14568 343 aaPredicted RBP20.8■□□□□ 0.92
CCNA2-202ENST00000618014 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
CCNA2-202ENST00000618014 ANTXR1Q9H6X2 564 aa20.8■□□□□ 0.92
CCNA2-202ENST00000618014 EIF4G3O43432 1585 aaKnown RBP20.79■□□□□ 0.92
CCNA2-202ENST00000618014 XRCC6P12956 609 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCNA2-202ENST00000618014 ANKRD30AQ9BXX3 1397 aa20.79■□□□□ 0.92
CCNA2-202ENST00000618014 PLEKHH1Q9ULM0 1364 aa20.79■□□□□ 0.92
CCNA2-202ENST00000618014 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
CCNA2-202ENST00000618014 ANKRD50Q9ULJ7 1429 aa20.79■□□□□ 0.92
CCNA2-202ENST00000618014 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
CCNA2-202ENST00000618014 SLKQ9H2G2 1235 aaPredicted RBP20.78■□□□□ 0.92
CCNA2-202ENST00000618014 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
CCNA2-202ENST00000618014 FSD2A1L4K1 749 aa20.78■□□□□ 0.92
CCNA2-202ENST00000618014 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
CCNA2-202ENST00000618014 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
CCNA2-202ENST00000618014 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
CCNA2-202ENST00000618014 GOLGA6L3A6NEY3 463 aa20.77■□□□□ 0.92
CCNA2-202ENST00000618014 ITSN2Q9NZM3 1697 aa20.76■□□□□ 0.91
CCNA2-202ENST00000618014 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
CCNA2-202ENST00000618014 NUP155O75694 1391 aa20.75■□□□□ 0.91
CCNA2-202ENST00000618014 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
CCNA2-202ENST00000618014 KDM5DQ9BY66 1539 aa20.74■□□□□ 0.91
CCNA2-202ENST00000618014 CFDP1Q9UEE9 299 aaPredicted RBP20.74■□□□□ 0.91
CCNA2-202ENST00000618014 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
CCNA2-202ENST00000618014 SEC24BO95487 1268 aa20.74■□□□□ 0.91
CCNA2-202ENST00000618014 PANK3Q9H999 370 aa20.74■□□□□ 0.91
CCNA2-202ENST00000618014 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
CCNA2-202ENST00000618014 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
CCNA2-202ENST00000618014 PRAG1Q86YV5 1406 aa20.72■□□□□ 0.91
CCNA2-202ENST00000618014 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
CCNA2-202ENST00000618014 IGHDP01880 384 aa20.7■□□□□ 0.9
CCNA2-202ENST00000618014 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
CCNA2-202ENST00000618014 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
CCNA2-202ENST00000618014 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
CCNA2-202ENST00000618014 GPATCH8Q9UKJ3 1502 aaKnown RBP20.69■□□□□ 0.9
CCNA2-202ENST00000618014 LAMC1P11047 1609 aa20.69■□□□□ 0.9
CCNA2-202ENST00000618014 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCNA2-202ENST00000618014 TESK2Q96S53 571 aa20.68■□□□□ 0.9
CCNA2-202ENST00000618014 PANK2Q9BZ23 570 aa20.68■□□□□ 0.9
CCNA2-202ENST00000618014 TROQ12816 1431 aaPredicted RBP20.67■□□□□ 0.9
CCNA2-202ENST00000618014 RAPGEF6Q8TEU7 1601 aa20.66■□□□□ 0.9
CCNA2-202ENST00000618014 PRDM15P57071 1507 aaPredicted RBP20.66■□□□□ 0.9
CCNA2-202ENST00000618014 MCM4P33991 863 aa20.66■□□□□ 0.9
CCNA2-202ENST00000618014 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
CCNA2-202ENST00000618014 PTPRGP23470 1445 aa20.65■□□□□ 0.9
CCNA2-202ENST00000618014 ARXQ96QS3 562 aa20.65■□□□□ 0.9
CCNA2-202ENST00000618014 NBPF1Q3BBV0 1214 aa20.65■□□□□ 0.9
CCNA2-202ENST00000618014 TBC1D2Q9BYX2 928 aa20.65■□□□□ 0.9
CCNA2-202ENST00000618014 ERBINQ96RT1 1412 aa20.65■□□□□ 0.9
CCNA2-202ENST00000618014 MRE11P49959 708 aa20.64■□□□□ 0.9
CCNA2-202ENST00000618014 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.9
CCNA2-202ENST00000618014 CGNL1Q0VF96 1302 aa20.64■□□□□ 0.9
CCNA2-202ENST00000618014 TBC1D32Q96NH3 1257 aa20.64■□□□□ 0.89
CCNA2-202ENST00000618014 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
CCNA2-202ENST00000618014 ZNF777Q9ULD5 760 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms