RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 ARHGEF5Q12774 1597 aa23.56■■□□□ 1.36
DDX1-207ENST00000617198 E9PCH4 1651 aa23.55■■□□□ 1.36
DDX1-207ENST00000617198 MYBBP1AQ9BQG0 1328 aaKnown RBP23.55■■□□□ 1.36
DDX1-207ENST00000617198 RALBP1Q15311 655 aa23.55■■□□□ 1.36
DDX1-207ENST00000617198 DCAF11Q8TEB1 546 aa23.54■■□□□ 1.36
DDX1-207ENST00000617198 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
DDX1-207ENST00000617198 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.35
DDX1-207ENST00000617198 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
DDX1-207ENST00000617198 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
DDX1-207ENST00000617198 FAM135AQ9P2D6 1515 aa23.48■■□□□ 1.35
DDX1-207ENST00000617198 NOP58Q9Y2X3 529 aaKnown RBP23.47■■□□□ 1.35
DDX1-207ENST00000617198 CCDC141Q6ZP82 1450 aa23.46■■□□□ 1.35
DDX1-207ENST00000617198 TRPM1Q7Z4N2 1603 aa23.46■■□□□ 1.35
DDX1-207ENST00000617198 PRAG1Q86YV5 1406 aa23.44■■□□□ 1.34
DDX1-207ENST00000617198 SAMD9LQ8IVG5 1584 aa23.44■■□□□ 1.34
DDX1-207ENST00000617198 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
DDX1-207ENST00000617198 PARD3Q8TEW0 1356 aa23.42■■□□□ 1.34
DDX1-207ENST00000617198 PREX2Q70Z35 1606 aa23.42■■□□□ 1.34
DDX1-207ENST00000617198 RSPH4AQ5TD94 716 aa23.42■■□□□ 1.34
DDX1-207ENST00000617198 NLRP13Q86W25 1043 aa23.42■■□□□ 1.34
DDX1-207ENST00000617198 CCDC144AA2RUR9 1427 aa23.41■■□□□ 1.34
DDX1-207ENST00000617198 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
DDX1-207ENST00000617198 ANP32AP39687 249 aaKnown RBP23.38■■□□□ 1.33
DDX1-207ENST00000617198 GPRASP1Q5JY77 1395 aa23.36■■□□□ 1.33
DDX1-207ENST00000617198 PDE3BQ13370 1112 aa23.36■■□□□ 1.33
DDX1-207ENST00000617198 RCAN3Q9UKA8 241 aa23.36■■□□□ 1.33
DDX1-207ENST00000617198 UNC13BO14795 1591 aa23.36■■□□□ 1.33
DDX1-207ENST00000617198 PAK3O75914 559 aaPredicted RBP23.35■■□□□ 1.33
DDX1-207ENST00000617198 LAMC1P11047 1609 aa23.35■■□□□ 1.33
DDX1-207ENST00000617198 PER1O15534 1290 aaPredicted RBP23.34■■□□□ 1.33
DDX1-207ENST00000617198 IPO9Q96P70 1041 aaKnown RBP23.34■■□□□ 1.33
DDX1-207ENST00000617198 MAST1Q9Y2H9 1570 aa23.34■■□□□ 1.33
DDX1-207ENST00000617198 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
DDX1-207ENST00000617198 COL17A1Q9UMD9 1497 aaPredicted RBP23.33■■□□□ 1.33
DDX1-207ENST00000617198 A2MP01023 1474 aa23.33■■□□□ 1.32
DDX1-207ENST00000617198 PLA2R1Q13018 1463 aa23.33■■□□□ 1.32
DDX1-207ENST00000617198 PRDM15P57071 1507 aaPredicted RBP23.32■■□□□ 1.32
DDX1-207ENST00000617198 SYCP2Q9BX26 1530 aa23.32■■□□□ 1.32
DDX1-207ENST00000617198 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
DDX1-207ENST00000617198 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
DDX1-207ENST00000617198 EXOC6Q8TAG9 804 aa23.3■■□□□ 1.32
DDX1-207ENST00000617198 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
DDX1-207ENST00000617198 INSRP06213 1382 aa23.28■■□□□ 1.32
DDX1-207ENST00000617198 IQGAP3Q86VI3 1631 aa23.28■■□□□ 1.32
DDX1-207ENST00000617198 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
DDX1-207ENST00000617198 MYO5CQ9NQX4 1742 aa23.27■■□□□ 1.32
DDX1-207ENST00000617198 TESK2Q96S53 571 aa23.27■■□□□ 1.32
DDX1-207ENST00000617198 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
DDX1-207ENST00000617198 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
DDX1-207ENST00000617198 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
DDX1-207ENST00000617198 DEKP35659 375 aaKnown RBP23.26■■□□□ 1.31
DDX1-207ENST00000617198 PLXNC1O60486 1568 aa23.26■■□□□ 1.31
DDX1-207ENST00000617198 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
DDX1-207ENST00000617198 ZBTB47Q9UFB7 747 aaPredicted RBP23.25■■□□□ 1.31
DDX1-207ENST00000617198 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
DDX1-207ENST00000617198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.317e-7■■□□□ 12.5
DDX1-207ENST00000617198 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
DDX1-207ENST00000617198 ERBINQ96RT1 1412 aa23.24■■□□□ 1.31
DDX1-207ENST00000617198 NBR1Q14596 966 aa23.24■■□□□ 1.31
DDX1-207ENST00000617198 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
DDX1-207ENST00000617198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.22■■□□□ 1.31
DDX1-207ENST00000617198 CDCA7LQ96GN5 454 aa23.21■■□□□ 1.31
DDX1-207ENST00000617198 PANK3Q9H999 370 aa23.21■■□□□ 1.31
DDX1-207ENST00000617198 ATP10AO60312 1499 aa23.21■■□□□ 1.31
DDX1-207ENST00000617198 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
DDX1-207ENST00000617198 TMF1P82094 1093 aa23.2■■□□□ 1.3
DDX1-207ENST00000617198 DUOX2Q9NRD8 1548 aa23.18■■□□□ 1.3
DDX1-207ENST00000617198 MAGI2Q86UL8 1455 aa23.18■■□□□ 1.3
DDX1-207ENST00000617198 MS4A1P11836 297 aa23.16■■□□□ 1.3
DDX1-207ENST00000617198 RNF17Q9BXT8 1623 aaKnown RBP23.16■■□□□ 1.3
DDX1-207ENST00000617198 PDE4AP27815 886 aa23.15■■□□□ 1.3
DDX1-207ENST00000617198 BACH2Q9BYV9 841 aa23.12■■□□□ 1.29
DDX1-207ENST00000617198 PLIN1O60240 522 aa23.1■■□□□ 1.29
DDX1-207ENST00000617198 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
DDX1-207ENST00000617198 NPM2Q86SE8 214 aaKnown RBP23.09■■□□□ 1.29
DDX1-207ENST00000617198 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
DDX1-207ENST00000617198 ABCC2Q92887 1545 aa23.08■■□□□ 1.29
DDX1-207ENST00000617198 CRBNQ96SW2 442 aa23.07■■□□□ 1.28
DDX1-207ENST00000617198 CHD1O14646 1710 aa23.07■■□□□ 1.28
DDX1-207ENST00000617198 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
DDX1-207ENST00000617198 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
DDX1-207ENST00000617198 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
DDX1-207ENST00000617198 MADDQ8WXG6 1647 aa23.05■■□□□ 1.28
DDX1-207ENST00000617198 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
DDX1-207ENST00000617198 PLCH2O75038 1416 aa23.03■■□□□ 1.28
DDX1-207ENST00000617198 PPP2R1AP30153 589 aa23.01■■□□□ 1.27
DDX1-207ENST00000617198 SYNMO15061 1565 aa23■■□□□ 1.27
DDX1-207ENST00000617198 ABCC1P33527 1531 aa23■■□□□ 1.27
DDX1-207ENST00000617198 WDR43Q15061 677 aaKnown RBP eCLIP22.99■■□□□ 1.27
DDX1-207ENST00000617198 EFCAB2Q5VUJ9 269 aa22.99■■□□□ 1.27
DDX1-207ENST00000617198 CDCA8Q53HL2 280 aa22.99■■□□□ 1.27
DDX1-207ENST00000617198 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
DDX1-207ENST00000617198 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
DDX1-207ENST00000617198 PLEKHH1Q9ULM0 1364 aa22.98■■□□□ 1.27
DDX1-207ENST00000617198 TRPM2O94759 1503 aa22.97■■□□□ 1.27
DDX1-207ENST00000617198 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
DDX1-207ENST00000617198 SCAF11Q99590 1463 aaKnown RBP22.97■■□□□ 1.27
DDX1-207ENST00000617198 C20orf194Q5TEA3 1177 aa22.97■■□□□ 1.27
DDX1-207ENST00000617198 STAC3Q96MF2 364 aa22.97■■□□□ 1.27
DDX1-207ENST00000617198 CEP152O94986 1710 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms