RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PTMAP06454 111 aaKnown RBP18.7■□□□□ 0.58
SNPH-203ENST00000614659 PTMSP20962 102 aa18.7■□□□□ 0.58
SNPH-203ENST00000614659 GOLGA2Q08379 1002 aa18.7■□□□□ 0.58
SNPH-203ENST00000614659 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
SNPH-203ENST00000614659 TMX4Q9H1E5 349 aaPredicted RBP18.69■□□□□ 0.58
SNPH-203ENST00000614659 PLEKHH2Q8IVE3 1493 aa18.69■□□□□ 0.58
SNPH-203ENST00000614659 L1TD1Q5T7N2 865 aaKnown RBP18.68■□□□□ 0.58
SNPH-203ENST00000614659 MIA2Q96PC5 1412 aa18.68■□□□□ 0.58
SNPH-203ENST00000614659 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
SNPH-203ENST00000614659 DEKP35659 375 aaKnown RBP18.67■□□□□ 0.58
SNPH-203ENST00000614659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNPH-203ENST00000614659 SNAPC4Q5SXM2 1469 aa18.66■□□□□ 0.58
SNPH-203ENST00000614659 TIAM1Q13009 1591 aa18.66■□□□□ 0.58
SNPH-203ENST00000614659 NGEFQ8N5V2 710 aa18.65■□□□□ 0.58
SNPH-203ENST00000614659 POGZQ7Z3K3 1410 aa18.65■□□□□ 0.58
SNPH-203ENST00000614659 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
SNPH-203ENST00000614659 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
SNPH-203ENST00000614659 DNTTIP2Q5QJE6 756 aaKnown RBP18.64■□□□□ 0.57
SNPH-203ENST00000614659 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
SNPH-203ENST00000614659 HDAC5Q9UQL6 1122 aa18.63■□□□□ 0.57
SNPH-203ENST00000614659 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
SNPH-203ENST00000614659 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
SNPH-203ENST00000614659 MCCP23508 829 aa18.62■□□□□ 0.57
SNPH-203ENST00000614659 IPO9Q96P70 1041 aaKnown RBP18.62■□□□□ 0.57
SNPH-203ENST00000614659 ARHGAP5Q13017 1502 aa18.62■□□□□ 0.57
SNPH-203ENST00000614659 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
SNPH-203ENST00000614659 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
SNPH-203ENST00000614659 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
SNPH-203ENST00000614659 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNPH-203ENST00000614659 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
SNPH-203ENST00000614659 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
SNPH-203ENST00000614659 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
SNPH-203ENST00000614659 AMPHP49418 695 aa18.59■□□□□ 0.57
SNPH-203ENST00000614659 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.56
SNPH-203ENST00000614659 MAP3K1Q13233 1512 aa18.57■□□□□ 0.56
SNPH-203ENST00000614659 HFM1A2PYH4 1435 aa18.55■□□□□ 0.56
SNPH-203ENST00000614659 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
SNPH-203ENST00000614659 CENPQQ7L2Z9 268 aaPredicted RBP18.55■□□□□ 0.56
SNPH-203ENST00000614659 PANK3Q9H999 370 aa18.55■□□□□ 0.56
SNPH-203ENST00000614659 ANKRD50Q9ULJ7 1429 aa18.54■□□□□ 0.56
SNPH-203ENST00000614659 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
SNPH-203ENST00000614659 ATF3P18847 181 aa18.54■□□□□ 0.56
SNPH-203ENST00000614659 CDK11BP21127 795 aaKnown RBP18.54■□□□□ 0.56
SNPH-203ENST00000614659 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
SNPH-203ENST00000614659 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
SNPH-203ENST00000614659 KIAA0586Q9BVV6 1533 aa18.53■□□□□ 0.56
SNPH-203ENST00000614659 E9PSI1 815 aa18.53■□□□□ 0.56
SNPH-203ENST00000614659 NUTM2DQ5VT03 806 aaPredicted RBP18.53■□□□□ 0.56
SNPH-203ENST00000614659 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.56
SNPH-203ENST00000614659 GBP4Q96PP9 640 aa18.52■□□□□ 0.55
SNPH-203ENST00000614659 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.55
SNPH-203ENST00000614659 EVA1CP58658 441 aa18.51■□□□□ 0.55
SNPH-203ENST00000614659 ITPRIPQ8IWB1 547 aa18.51■□□□□ 0.55
SNPH-203ENST00000614659 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
SNPH-203ENST00000614659 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
SNPH-203ENST00000614659 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
SNPH-203ENST00000614659 COG3Q96JB2 828 aa18.5■□□□□ 0.55
SNPH-203ENST00000614659 CUL7Q14999 1698 aa18.49■□□□□ 0.55
SNPH-203ENST00000614659 STK31Q9BXU1 1019 aa18.49■□□□□ 0.55
SNPH-203ENST00000614659 BRD4O60885 1362 aaPredicted RBP18.49■□□□□ 0.55
SNPH-203ENST00000614659 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
SNPH-203ENST00000614659 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
SNPH-203ENST00000614659 SMC4Q9NTJ3 1288 aa18.48■□□□□ 0.55
SNPH-203ENST00000614659 THEMISQ8N1K5 641 aaPredicted RBP18.48■□□□□ 0.55
SNPH-203ENST00000614659 GOLGA6L6A8MZA4 724 aa18.46■□□□□ 0.55
SNPH-203ENST00000614659 AAMPQ13685 434 aa18.44■□□□□ 0.54
SNPH-203ENST00000614659 HMMRO75330 724 aa18.44■□□□□ 0.54
SNPH-203ENST00000614659 PSME1Q06323 249 aa18.44■□□□□ 0.54
SNPH-203ENST00000614659 KCNJ4P48050 445 aa18.43■□□□□ 0.54
SNPH-203ENST00000614659 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
SNPH-203ENST00000614659 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
SNPH-203ENST00000614659 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
SNPH-203ENST00000614659 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
SNPH-203ENST00000614659 KIAA1107Q9UPP5 1409 aa18.42■□□□□ 0.54
SNPH-203ENST00000614659 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
SNPH-203ENST00000614659 MSNP26038 577 aaKnown RBP18.42■□□□□ 0.54
SNPH-203ENST00000614659 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
SNPH-203ENST00000614659 ROCK1Q13464 1354 aa18.41■□□□□ 0.54
SNPH-203ENST00000614659 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
SNPH-203ENST00000614659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNPH-203ENST00000614659 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
SNPH-203ENST00000614659 PDE4AP27815 886 aa18.39■□□□□ 0.53
SNPH-203ENST00000614659 ZNF644Q9H582 1327 aaPredicted RBP18.38■□□□□ 0.53
SNPH-203ENST00000614659 NRDCO43847 1150 aa18.38■□□□□ 0.53
SNPH-203ENST00000614659 FGD1P98174 961 aa18.38■□□□□ 0.53
SNPH-203ENST00000614659 CHAF1AQ13111 956 aaPredicted RBP18.38■□□□□ 0.53
SNPH-203ENST00000614659 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
SNPH-203ENST00000614659 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
SNPH-203ENST00000614659 PLCB2Q00722 1185 aa18.37■□□□□ 0.53
SNPH-203ENST00000614659 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
SNPH-203ENST00000614659 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 DAPK1P53355 1430 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 PCF11O94913 1555 aaKnown RBP18.36■□□□□ 0.53
SNPH-203ENST00000614659 TPRNQ4KMQ1 711 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 GOLGA6L4A6NEF3 574 aa18.36■□□□□ 0.53
SNPH-203ENST00000614659 MINK1Q8N4C8 1332 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms