RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
PCDHB16-201ENST00000609684 IPO9Q96P70 1041 aaKnown RBP17.98■□□□□ 0.47
PCDHB16-201ENST00000609684 NCOA2Q15596 1464 aa17.98■□□□□ 0.47
PCDHB16-201ENST00000609684 NAP1L5Q96NT1 182 aaPredicted RBP17.98■□□□□ 0.47
PCDHB16-201ENST00000609684 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
PCDHB16-201ENST00000609684 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
PCDHB16-201ENST00000609684 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
PCDHB16-201ENST00000609684 PLIN1O60240 522 aa17.97■□□□□ 0.47
PCDHB16-201ENST00000609684 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
PCDHB16-201ENST00000609684 VGFO15240 615 aaPredicted RBP17.97■□□□□ 0.47
PCDHB16-201ENST00000609684 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
PCDHB16-201ENST00000609684 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
PCDHB16-201ENST00000609684 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
PCDHB16-201ENST00000609684 CCDC7Q96M83 1385 aa17.95■□□□□ 0.46
PCDHB16-201ENST00000609684 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 CFTRP13569 1480 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 KIAA1211Q6ZU35 1233 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 EXOC6Q8TAG9 804 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
PCDHB16-201ENST00000609684 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
PCDHB16-201ENST00000609684 AMPHP49418 695 aa17.93■□□□□ 0.46
PCDHB16-201ENST00000609684 SLC4A10Q6U841 1118 aa17.93■□□□□ 0.46
PCDHB16-201ENST00000609684 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
PCDHB16-201ENST00000609684 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
PCDHB16-201ENST00000609684 APAF1O14727 1248 aa17.92■□□□□ 0.46
PCDHB16-201ENST00000609684 E9PSI1 815 aa17.91■□□□□ 0.46
PCDHB16-201ENST00000609684 GBP4Q96PP9 640 aa17.91■□□□□ 0.46
PCDHB16-201ENST00000609684 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
PCDHB16-201ENST00000609684 HMMRO75330 724 aa17.9■□□□□ 0.46
PCDHB16-201ENST00000609684 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
PCDHB16-201ENST00000609684 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
PCDHB16-201ENST00000609684 CHMP4AQ9BY43 222 aa17.9■□□□□ 0.46
PCDHB16-201ENST00000609684 CRBNQ96SW2 442 aa17.89■□□□□ 0.45
PCDHB16-201ENST00000609684 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
PCDHB16-201ENST00000609684 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
PCDHB16-201ENST00000609684 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
PCDHB16-201ENST00000609684 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
PCDHB16-201ENST00000609684 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
PCDHB16-201ENST00000609684 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
PCDHB16-201ENST00000609684 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
PCDHB16-201ENST00000609684 WASHC2AQ641Q2 1341 aa17.86■□□□□ 0.45
PCDHB16-201ENST00000609684 GRIN2BQ13224 1484 aa17.86■□□□□ 0.45
PCDHB16-201ENST00000609684 PDE4AP27815 886 aa17.86■□□□□ 0.45
PCDHB16-201ENST00000609684 TRIM6-TRIM34B2RNG4 842 aa17.85■□□□□ 0.45
PCDHB16-201ENST00000609684 COG3Q96JB2 828 aa17.85■□□□□ 0.45
PCDHB16-201ENST00000609684 COG6Q9Y2V7 657 aa17.85■□□□□ 0.45
PCDHB16-201ENST00000609684 GOLGA6L6A8MZA4 724 aa17.84■□□□□ 0.45
PCDHB16-201ENST00000609684 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
PCDHB16-201ENST00000609684 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
PCDHB16-201ENST00000609684 NESP48681 1621 aa17.83■□□□□ 0.45
PCDHB16-201ENST00000609684 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
PCDHB16-201ENST00000609684 MSNP26038 577 aaKnown RBP17.82■□□□□ 0.44
PCDHB16-201ENST00000609684 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
PCDHB16-201ENST00000609684 NRDCO43847 1150 aa17.8■□□□□ 0.44
PCDHB16-201ENST00000609684 HDAC5Q9UQL6 1122 aa17.8■□□□□ 0.44
PCDHB16-201ENST00000609684 PTMSP20962 102 aa17.8■□□□□ 0.44
PCDHB16-201ENST00000609684 MIA2Q96PC5 1412 aa17.8■□□□□ 0.44
PCDHB16-201ENST00000609684 TULP1O00294 542 aaPredicted RBP17.79■□□□□ 0.44
PCDHB16-201ENST00000609684 CHMP3Q9Y3E7 222 aa17.79■□□□□ 0.44
PCDHB16-201ENST00000609684 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
PCDHB16-201ENST00000609684 STAC3Q96MF2 364 aa17.79■□□□□ 0.44
PCDHB16-201ENST00000609684 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
PCDHB16-201ENST00000609684 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
PCDHB16-201ENST00000609684 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
PCDHB16-201ENST00000609684 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
PCDHB16-201ENST00000609684 ANKRD45Q5TZF3 282 aa17.77■□□□□ 0.43
PCDHB16-201ENST00000609684 NGEFQ8N5V2 710 aa17.77■□□□□ 0.43
PCDHB16-201ENST00000609684 SLC4A3P48751 1232 aa17.76■□□□□ 0.43
PCDHB16-201ENST00000609684 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
PCDHB16-201ENST00000609684 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
PCDHB16-201ENST00000609684 GORABQ5T7V8 394 aa17.76■□□□□ 0.43
PCDHB16-201ENST00000609684 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
PCDHB16-201ENST00000609684 GNL2Q13823 731 aaKnown RBP17.75■□□□□ 0.43
PCDHB16-201ENST00000609684 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
PCDHB16-201ENST00000609684 RIPK4P57078 832 aa17.74■□□□□ 0.43
PCDHB16-201ENST00000609684 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
PCDHB16-201ENST00000609684 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
PCDHB16-201ENST00000609684 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
PCDHB16-201ENST00000609684 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
PCDHB16-201ENST00000609684 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
PCDHB16-201ENST00000609684 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
PCDHB16-201ENST00000609684 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
PCDHB16-201ENST00000609684 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
PCDHB16-201ENST00000609684 GOLGA6L3A6NEY3 463 aa17.72■□□□□ 0.43
PCDHB16-201ENST00000609684 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
PCDHB16-201ENST00000609684 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
PCDHB16-201ENST00000609684 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
PCDHB16-201ENST00000609684 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
PCDHB16-201ENST00000609684 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.43
PCDHB16-201ENST00000609684 HFM1A2PYH4 1435 aa17.71■□□□□ 0.43
PCDHB16-201ENST00000609684 ST18O60284 1047 aa17.71■□□□□ 0.43
PCDHB16-201ENST00000609684 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.43
PCDHB16-201ENST00000609684 SYAP1Q96A49 352 aaPredicted RBP17.71■□□□□ 0.42
PCDHB16-201ENST00000609684 CFAP70Q5T0N1 1121 aa17.7■□□□□ 0.42
PCDHB16-201ENST00000609684 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
PCDHB16-201ENST00000609684 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms