RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
LARP4B-210ENST00000609318 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
LARP4B-210ENST00000609318 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
LARP4B-210ENST00000609318 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
LARP4B-210ENST00000609318 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
LARP4B-210ENST00000609318 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
LARP4B-210ENST00000609318 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
LARP4B-210ENST00000609318 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
LARP4B-210ENST00000609318 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
LARP4B-210ENST00000609318 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
LARP4B-210ENST00000609318 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
LARP4B-210ENST00000609318 PANK3Q9H999 370 aa13.34□□□□□ -0.27
LARP4B-210ENST00000609318 HDGFL2Q7Z4V5 671 aaPredicted RBP13.34□□□□□ -0.27
LARP4B-210ENST00000609318 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.28
LARP4B-210ENST00000609318 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.28
LARP4B-210ENST00000609318 NBPF8Q3BBV2 869 aa13.33□□□□□ -0.28
LARP4B-210ENST00000609318 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
LARP4B-210ENST00000609318 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
LARP4B-210ENST00000609318 AKNAQ7Z591 1439 aa13.32□□□□□ -0.28
LARP4B-210ENST00000609318 KIF14Q15058 1648 aa13.32□□□□□ -0.28
LARP4B-210ENST00000609318 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
LARP4B-210ENST00000609318 CCDC141Q6ZP82 1450 aa13.31□□□□□ -0.28
LARP4B-210ENST00000609318 B4GALNT3Q6L9W6 998 aa13.3□□□□□ -0.28
LARP4B-210ENST00000609318 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
LARP4B-210ENST00000609318 BECN1Q14457 450 aa13.3□□□□□ -0.28
LARP4B-210ENST00000609318 ERICH6BQ5W0A0 696 aa13.3□□□□□ -0.28
LARP4B-210ENST00000609318 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
LARP4B-210ENST00000609318 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
LARP4B-210ENST00000609318 NCOA1Q15788 1441 aa13.29□□□□□ -0.28
LARP4B-210ENST00000609318 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
LARP4B-210ENST00000609318 WDR62O43379 1518 aa13.29□□□□□ -0.28
LARP4B-210ENST00000609318 RAPGEF6Q8TEU7 1601 aa13.29□□□□□ -0.28
LARP4B-210ENST00000609318 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
LARP4B-210ENST00000609318 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
LARP4B-210ENST00000609318 TERF2IPQ9NYB0 399 aa13.28□□□□□ -0.28
LARP4B-210ENST00000609318 ANKRD30BQ9BXX2 1392 aa13.28□□□□□ -0.28
LARP4B-210ENST00000609318 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
LARP4B-210ENST00000609318 NRDCO43847 1150 aa13.27□□□□□ -0.29
LARP4B-210ENST00000609318 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
LARP4B-210ENST00000609318 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.29
LARP4B-210ENST00000609318 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.29
LARP4B-210ENST00000609318 FTSJ3Q8IY81 847 aaKnown RBP13.26□□□□□ -0.29
LARP4B-210ENST00000609318 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
LARP4B-210ENST00000609318 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
LARP4B-210ENST00000609318 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
LARP4B-210ENST00000609318 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
LARP4B-210ENST00000609318 KIAA0556O60303 1618 aa13.25□□□□□ -0.29
LARP4B-210ENST00000609318 U2AF1L5P0DN76 240 aaPredicted RBP13.25□□□□□ -0.29
LARP4B-210ENST00000609318 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
LARP4B-210ENST00000609318 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
LARP4B-210ENST00000609318 ATP10BO94823 1461 aa13.25□□□□□ -0.29
LARP4B-210ENST00000609318 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
LARP4B-210ENST00000609318 EVC2Q86UK5 1308 aa13.24□□□□□ -0.29
LARP4B-210ENST00000609318 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
LARP4B-210ENST00000609318 NBPF1Q3BBV0 1214 aa13.23□□□□□ -0.29
LARP4B-210ENST00000609318 MS4A1P11836 297 aa13.22□□□□□ -0.29
LARP4B-210ENST00000609318 CENPJQ9HC77 1338 aaPredicted RBP13.22□□□□□ -0.29
LARP4B-210ENST00000609318 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
LARP4B-210ENST00000609318 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
LARP4B-210ENST00000609318 SOX12O15370 315 aa13.21□□□□□ -0.29
LARP4B-210ENST00000609318 GOLGA2Q08379 1002 aa13.21□□□□□ -0.3
LARP4B-210ENST00000609318 CFAP70Q5T0N1 1121 aa13.2□□□□□ -0.3
LARP4B-210ENST00000609318 NUP160Q12769 1436 aa13.2□□□□□ -0.3
LARP4B-210ENST00000609318 RAPGEF3O95398 923 aa13.2□□□□□ -0.3
LARP4B-210ENST00000609318 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
LARP4B-210ENST00000609318 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
LARP4B-210ENST00000609318 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
LARP4B-210ENST00000609318 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
LARP4B-210ENST00000609318 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
LARP4B-210ENST00000609318 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
LARP4B-210ENST00000609318 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
LARP4B-210ENST00000609318 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
LARP4B-210ENST00000609318 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
LARP4B-210ENST00000609318 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
LARP4B-210ENST00000609318 SAMD9Q5K651 1589 aa13.18□□□□□ -0.3
LARP4B-210ENST00000609318 CD109Q6YHK3 1445 aa13.17□□□□□ -0.3
LARP4B-210ENST00000609318 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
LARP4B-210ENST00000609318 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
LARP4B-210ENST00000609318 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
LARP4B-210ENST00000609318 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
LARP4B-210ENST00000609318 L1TD1Q5T7N2 865 aaKnown RBP13.15□□□□□ -0.3
LARP4B-210ENST00000609318 RGS3P49796 1198 aa13.15□□□□□ -0.3
LARP4B-210ENST00000609318 NAP1L5Q96NT1 182 aaPredicted RBP13.15□□□□□ -0.3
LARP4B-210ENST00000609318 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
LARP4B-210ENST00000609318 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
LARP4B-210ENST00000609318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
LARP4B-210ENST00000609318 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
LARP4B-210ENST00000609318 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
LARP4B-210ENST00000609318 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
LARP4B-210ENST00000609318 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
LARP4B-210ENST00000609318 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
LARP4B-210ENST00000609318 PLCH2O75038 1416 aa13.12□□□□□ -0.31
LARP4B-210ENST00000609318 FANCAO15360 1455 aa13.12□□□□□ -0.31
LARP4B-210ENST00000609318 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
LARP4B-210ENST00000609318 FGD1P98174 961 aa13.11□□□□□ -0.31
LARP4B-210ENST00000609318 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
LARP4B-210ENST00000609318 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
LARP4B-210ENST00000609318 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
LARP4B-210ENST00000609318 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
LARP4B-210ENST00000609318 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms