RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 KIF20AO95235 890 aa6.09□□□□□ -1.43
HDDC2-208ENST00000609021 P3H3Q8IVL6 736 aa6.09□□□□□ -1.43
HDDC2-208ENST00000609021 SHROOM2Q13796 1616 aa6.08□□□□□ -1.44
HDDC2-208ENST00000609021 CEP164Q9UPV0 1460 aa6.08□□□□□ -1.44
HDDC2-208ENST00000609021 UTP14CQ5TAP6 766 aaKnown RBP6.08□□□□□ -1.44
HDDC2-208ENST00000609021 MRC2Q9UBG0 1479 aa6.08□□□□□ -1.44
HDDC2-208ENST00000609021 CLCN1P35523 988 aa6.07□□□□□ -1.44
HDDC2-208ENST00000609021 TNNT3P45378 269 aaPredicted RBP6.07□□□□□ -1.44
HDDC2-208ENST00000609021 MMP14P50281 582 aa6.07□□□□□ -1.44
HDDC2-208ENST00000609021 FAM13BQ9NYF5 915 aa6.07□□□□□ -1.44
HDDC2-208ENST00000609021 CFAP43Q8NDM7 1665 aa6.07□□□□□ -1.44
HDDC2-208ENST00000609021 RAD54L2Q9Y4B4 1467 aa6.06□□□□□ -1.44
HDDC2-208ENST00000609021 BANK1Q8NDB2 785 aa6.06□□□□□ -1.44
HDDC2-208ENST00000609021 RAPGEF2Q9Y4G8 1499 aa6.06□□□□□ -1.44
HDDC2-208ENST00000609021 SSR1P43307 286 aaKnown RBP6.06□□□□□ -1.44
HDDC2-208ENST00000609021 CC2D2BQ6DHV5 1058 aa6.06□□□□□ -1.44
HDDC2-208ENST00000609021 RRAGDQ9NQL2 400 aaPredicted RBP6.06□□□□□ -1.44
HDDC2-208ENST00000609021 EEA1Q15075 1411 aa6.06□□□□□ -1.44
HDDC2-208ENST00000609021 CHD1O14646 1710 aa6.06□□□□□ -1.44
HDDC2-208ENST00000609021 PLEKHD1A6NEE1 506 aa6.05□□□□□ -1.44
HDDC2-208ENST00000609021 LETM1O95202 739 aaPredicted RBP6.05□□□□□ -1.44
HDDC2-208ENST00000609021 HSP90AB3PQ58FF7 597 aa6.05□□□□□ -1.44
HDDC2-208ENST00000609021 LMOD3Q0VAK6 560 aa6.05□□□□□ -1.44
HDDC2-208ENST00000609021 TCERG1O14776 1098 aaKnown RBP6.05□□□□□ -1.44
HDDC2-208ENST00000609021 ARID4AP29374 1257 aaPredicted RBP6.05□□□□□ -1.44
HDDC2-208ENST00000609021 GOLIM4O00461 696 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 GOLGA6L3A6NEY3 463 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 CCDC27Q2M243 656 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 CASC1Q6TDU7 716 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 CEP120Q8N960 986 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.04□□□□□ -1.443e-16■■■■□ 21.2
HDDC2-208ENST00000609021 SLC52A1Q9NWF4 448 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 PPP4R2Q9NY27 417 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 CEP170Q5SW79 1584 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 ARAP1Q96P48 1450 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 DMTNQ08495 405 aa6.04□□□□□ -1.44
HDDC2-208ENST00000609021 GTPBP4Q9BZE4 634 aaKnown RBP6.04□□□□□ -1.44
HDDC2-208ENST00000609021 CGNQ9P2M7 1197 aaKnown RBP6.04□□□□□ -1.44
HDDC2-208ENST00000609021 ZBTB12Q9Y330 459 aaPredicted RBP6.04□□□□□ -1.44
HDDC2-208ENST00000609021 ZNF608Q9ULD9 1512 aaPredicted RBP6.02□□□□□ -1.45
HDDC2-208ENST00000609021 MAFGO15525 162 aa6.02□□□□□ -1.45
HDDC2-208ENST00000609021 MPNDQ8N594 471 aa6.02□□□□□ -1.45
HDDC2-208ENST00000609021 IGF1RP08069 1367 aa6.02□□□□□ -1.45
HDDC2-208ENST00000609021 NBPF20Q3BBV1 942 aa6.02□□□□□ -1.45
HDDC2-208ENST00000609021 TTC36A6NLP5 189 aa6.01□□□□□ -1.45
HDDC2-208ENST00000609021 RBM25P49756 843 aaKnown RBP6.01□□□□□ -1.45
HDDC2-208ENST00000609021 EGFL6Q8IUX8 553 aa6.01□□□□□ -1.45
HDDC2-208ENST00000609021 ZNF692Q9BU19 519 aaPredicted RBP6.01□□□□□ -1.45
HDDC2-208ENST00000609021 KDM4AO75164 1064 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 CALRP27797 417 aaKnown RBP6□□□□□ -1.45
HDDC2-208ENST00000609021 PSEN1P49768 467 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 CARD10Q9BWT7 1032 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 FBLN2P98095 1184 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 NFKBIBQ15653 356 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 NBPF1Q3BBV0 1214 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 NGEFQ8N5V2 710 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 KDM2AQ9Y2K7 1162 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 RNF39Q9H2S5 420 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 PDS5BQ9NTI5 1447 aa6□□□□□ -1.45
HDDC2-208ENST00000609021 CLASP1Q7Z460 1538 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 KIAA1211Q6ZU35 1233 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 RAD21O60216 631 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 KCNJ4P48050 445 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 SEMA3FQ13275 785 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 GEMIN8Q9NWZ8 242 aaKnown RBP5.99□□□□□ -1.45
HDDC2-208ENST00000609021 SH3BP1Q9Y3L3 701 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 HSP90AB4PQ58FF6 505 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 NBPF11Q86T75 865 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 DCAF11Q8TEB1 546 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 ZNF428Q96B54 188 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 TSPYL1Q9H0U9 437 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 TERF2IPQ9NYB0 399 aa5.99□□□□□ -1.45
HDDC2-208ENST00000609021 SNAPC4Q5SXM2 1469 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 ZNF771Q7L3S4 317 aaPredicted RBP5.98□□□□□ -1.45
HDDC2-208ENST00000609021 ARMCX6Q7L4S7 300 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 GOLGA3Q08378 1498 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 IFT140Q96RY7 1462 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 ARHGAP35Q9NRY4 1499 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 TNIKQ9UKE5 1360 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 CCDC66A2RUB6 948 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 MAP2K1Q02750 393 aaPredicted RBP5.98□□□□□ -1.45
HDDC2-208ENST00000609021 FAM177A1Q8N128 213 aaPredicted RBP5.98□□□□□ -1.45
HDDC2-208ENST00000609021 CHMP4CQ96CF2 233 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 MRVI1Q9Y6F6 885 aa5.98□□□□□ -1.45
HDDC2-208ENST00000609021 ZNF500O60304 480 aaPredicted RBP5.97□□□□□ -1.45
HDDC2-208ENST00000609021 DNAJC5Q9H3Z4 198 aa5.97□□□□□ -1.45
HDDC2-208ENST00000609021 YY1AP1Q9H869 796 aa5.97□□□□□ -1.45
HDDC2-208ENST00000609021 ARHGEF11O15085 1522 aa5.97□□□□□ -1.45
HDDC2-208ENST00000609021 TRIM52Q96A61 297 aa5.97□□□□□ -1.45
HDDC2-208ENST00000609021 RBM28Q9NW13 759 aaKnown RBP5.97□□□□□ -1.45
HDDC2-208ENST00000609021 UGGT2Q9NYU1 1516 aa5.97□□□□□ -1.45
HDDC2-208ENST00000609021 ESPNB1AK53 854 aa5.96□□□□□ -1.46
HDDC2-208ENST00000609021 FOXD4L6Q3SYB3 417 aaPredicted RBP5.96□□□□□ -1.46
HDDC2-208ENST00000609021 FOXD4L3Q6VB84 417 aaPredicted RBP5.96□□□□□ -1.46
HDDC2-208ENST00000609021 TMTC2Q8N394 836 aa5.96□□□□□ -1.46
HDDC2-208ENST00000609021 ZNF513Q8N8E2 541 aaPredicted RBP5.96□□□□□ -1.46
HDDC2-208ENST00000609021 SLC4A1APQ9BWU0 796 aaKnown RBP5.96□□□□□ -1.46
HDDC2-208ENST00000609021 PCF11O94913 1555 aaKnown RBP5.96□□□□□ -1.46
HDDC2-208ENST00000609021 NBPF9Q3BBW0 867 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms