RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
SHANK2-220ENST00000608988 NLRP13Q86W25 1043 aa29.8■■■□□ 2.36
SHANK2-220ENST00000608988 RCAN3Q9UKA8 241 aa29.8■■■□□ 2.36
SHANK2-220ENST00000608988 ARHGEF5Q12774 1597 aa29.8■■■□□ 2.36
SHANK2-220ENST00000608988 LAMC1P11047 1609 aa29.78■■■□□ 2.36
SHANK2-220ENST00000608988 WASHC2CQ9Y4E1 1318 aa29.78■■■□□ 2.36
SHANK2-220ENST00000608988 ABCC10Q5T3U5 1492 aa29.78■■■□□ 2.36
SHANK2-220ENST00000608988 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
SHANK2-220ENST00000608988 PLB1Q6P1J6 1458 aa29.77■■■□□ 2.36
SHANK2-220ENST00000608988 CARMIL2Q6F5E8 1435 aa29.76■■■□□ 2.36
SHANK2-220ENST00000608988 ST20-MTHFSA0A0A6YYL1 179 aa29.76■■■□□ 2.36
SHANK2-220ENST00000608988 USP35Q9P2H5 1018 aa29.76■■■□□ 2.35
SHANK2-220ENST00000608988 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
SHANK2-220ENST00000608988 TRPM1Q7Z4N2 1603 aa29.74■■■□□ 2.35
SHANK2-220ENST00000608988 PLEKHH2Q8IVE3 1493 aa29.74■■■□□ 2.35
SHANK2-220ENST00000608988 ZNF777Q9ULD5 760 aaPredicted RBP29.73■■■□□ 2.35
SHANK2-220ENST00000608988 EXOC6Q8TAG9 804 aa29.71■■■□□ 2.35
SHANK2-220ENST00000608988 CNGB1Q14028 1251 aaPredicted RBP29.7■■■□□ 2.34
SHANK2-220ENST00000608988 ABCA8O94911 1581 aa29.69■■■□□ 2.34
SHANK2-220ENST00000608988 GPRASP1Q5JY77 1395 aa29.69■■■□□ 2.34
SHANK2-220ENST00000608988 BLMP54132 1417 aaPredicted RBP29.68■■■□□ 2.34
SHANK2-220ENST00000608988 PDE4AP27815 886 aa29.68■■■□□ 2.34
SHANK2-220ENST00000608988 BACH2Q9BYV9 841 aa29.68■■■□□ 2.34
SHANK2-220ENST00000608988 PRAG1Q86YV5 1406 aa29.68■■■□□ 2.34
SHANK2-220ENST00000608988 TSPY4P0CV99 314 aa29.67■■■□□ 2.34
SHANK2-220ENST00000608988 TSPY10P0CW01 314 aa29.67■■■□□ 2.34
SHANK2-220ENST00000608988 SYNJ2O15056 1496 aa29.67■■■□□ 2.34
SHANK2-220ENST00000608988 DCAF11Q8TEB1 546 aa29.65■■■□□ 2.34
SHANK2-220ENST00000608988 PLEKHD1A6NEE1 506 aa29.64■■■□□ 2.34
SHANK2-220ENST00000608988 COL17A1Q9UMD9 1497 aaPredicted RBP29.64■■■□□ 2.33
SHANK2-220ENST00000608988 FAM135AQ9P2D6 1515 aa29.63■■■□□ 2.33
SHANK2-220ENST00000608988 PPM1GO15355 546 aaPredicted RBP29.62■■■□□ 2.33
SHANK2-220ENST00000608988 EIF2AK4Q9P2K8 1649 aaKnown RBP29.62■■■□□ 2.33
SHANK2-220ENST00000608988 PRDM15P57071 1507 aaPredicted RBP29.6■■■□□ 2.33
SHANK2-220ENST00000608988 NUP160Q12769 1436 aa29.6■■■□□ 2.33
SHANK2-220ENST00000608988 DDRGK1Q96HY6 314 aa29.59■■■□□ 2.33
SHANK2-220ENST00000608988 PER1O15534 1290 aaPredicted RBP29.59■■■□□ 2.33
SHANK2-220ENST00000608988 KDM2AQ9Y2K7 1162 aa29.59■■■□□ 2.33
SHANK2-220ENST00000608988 RSPH4AQ5TD94 716 aa29.58■■■□□ 2.33
SHANK2-220ENST00000608988 CCDC141Q6ZP82 1450 aa29.57■■■□□ 2.32
SHANK2-220ENST00000608988 ATP10BO94823 1461 aa29.57■■■□□ 2.32
SHANK2-220ENST00000608988 UNC13BO14795 1591 aa29.57■■■□□ 2.32
SHANK2-220ENST00000608988 CCDC144AA2RUR9 1427 aa29.56■■■□□ 2.32
SHANK2-220ENST00000608988 MAST1Q9Y2H9 1570 aa29.54■■■□□ 2.32
SHANK2-220ENST00000608988 PREX2Q70Z35 1606 aa29.49■■■□□ 2.31
SHANK2-220ENST00000608988 NPM2Q86SE8 214 aaKnown RBP29.49■■■□□ 2.31
SHANK2-220ENST00000608988 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
SHANK2-220ENST00000608988 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
SHANK2-220ENST00000608988 A2MP01023 1474 aa29.47■■■□□ 2.31
SHANK2-220ENST00000608988 ERBINQ96RT1 1412 aa29.47■■■□□ 2.31
SHANK2-220ENST00000608988 SAMD9LQ8IVG5 1584 aa29.46■■■□□ 2.31
SHANK2-220ENST00000608988 SENP3-EIF4A1A0A087X0R7 540 aa29.46■■■□□ 2.31
SHANK2-220ENST00000608988 NEFMP07197 916 aa29.45■■■□□ 2.31
SHANK2-220ENST00000608988 IQGAP3Q86VI3 1631 aa29.45■■■□□ 2.3
SHANK2-220ENST00000608988 ATP10AO60312 1499 aa29.44■■■□□ 2.3
SHANK2-220ENST00000608988 TESK2Q96S53 571 aa29.42■■■□□ 2.3
SHANK2-220ENST00000608988 RNF17Q9BXT8 1623 aaKnown RBP29.42■■■□□ 2.3
SHANK2-220ENST00000608988 MYO5CQ9NQX4 1742 aa29.42■■■□□ 2.3
SHANK2-220ENST00000608988 CDCA7LQ96GN5 454 aa29.42■■■□□ 2.3
SHANK2-220ENST00000608988 CDC42BPBQ9Y5S2 1711 aa29.41■■■□□ 2.3
SHANK2-220ENST00000608988 PLA2R1Q13018 1463 aa29.41■■■□□ 2.3
SHANK2-220ENST00000608988 PLXNC1O60486 1568 aa29.41■■■□□ 2.3
SHANK2-220ENST00000608988 CRBNQ96SW2 442 aa29.4■■■□□ 2.3
SHANK2-220ENST00000608988 DISP3Q9P2K9 1392 aa29.4■■■□□ 2.3
SHANK2-220ENST00000608988 TMF1P82094 1093 aa29.39■■■□□ 2.3
SHANK2-220ENST00000608988 CLASP1Q7Z460 1538 aa29.39■■■□□ 2.29
SHANK2-220ENST00000608988 HNRNPMP52272 730 aaKnown RBP eCLIP29.38■■■□□ 2.296e-7■■■■□ 23.1
SHANK2-220ENST00000608988 SALL2Q9Y467 1007 aaPredicted RBP29.37■■■□□ 2.29
SHANK2-220ENST00000608988 KDM2BQ8NHM5 1336 aa29.37■■■□□ 2.29
SHANK2-220ENST00000608988 CENPQQ7L2Z9 268 aaPredicted RBP29.36■■■□□ 2.29
SHANK2-220ENST00000608988 NBPF1Q3BBV0 1214 aa29.34■■■□□ 2.29
SHANK2-220ENST00000608988 PANK3Q9H999 370 aa29.34■■■□□ 2.29
SHANK2-220ENST00000608988 LAS1LQ9Y4W2 734 aaKnown RBP29.34■■■□□ 2.29
SHANK2-220ENST00000608988 MAGI2Q86UL8 1455 aa29.33■■■□□ 2.29
SHANK2-220ENST00000608988 CC2D1BQ5T0F9 858 aaKnown RBP29.3■■■□□ 2.28
SHANK2-220ENST00000608988 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.3■■■□□ 2.28
SHANK2-220ENST00000608988 PLIN1O60240 522 aa29.29■■■□□ 2.28
SHANK2-220ENST00000608988 DUOX2Q9NRD8 1548 aa29.27■■■□□ 2.28
SHANK2-220ENST00000608988 EIF3AQ14152 1382 aaKnown RBP29.26■■■□□ 2.28
SHANK2-220ENST00000608988 SYNMO15061 1565 aa29.26■■■□□ 2.27
SHANK2-220ENST00000608988 SYCP2Q9BX26 1530 aa29.26■■■□□ 2.27
SHANK2-220ENST00000608988 WDR7Q9Y4E6 1490 aa29.24■■■□□ 2.27
SHANK2-220ENST00000608988 ZNF521Q96K83 1311 aa29.24■■■□□ 2.27
SHANK2-220ENST00000608988 IQGAP1P46940 1657 aa29.24■■■□□ 2.27
SHANK2-220ENST00000608988 FAM161AQ3B820 660 aa29.23■■■□□ 2.27
SHANK2-220ENST00000608988 PIK3C2GO75747 1445 aa29.23■■■□□ 2.27
SHANK2-220ENST00000608988 RGL3Q3MIN7 710 aa29.22■■■□□ 2.27
SHANK2-220ENST00000608988 CDCA8Q53HL2 280 aa29.22■■■□□ 2.27
SHANK2-220ENST00000608988 NPC1L1Q9UHC9 1359 aa29.22■■■□□ 2.27
SHANK2-220ENST00000608988 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
SHANK2-220ENST00000608988 STAC3Q96MF2 364 aa29.21■■■□□ 2.27
SHANK2-220ENST00000608988 WDR43Q15061 677 aaKnown RBP eCLIP29.2■■■□□ 2.26
SHANK2-220ENST00000608988 DAXXQ9UER7 740 aaPredicted RBP29.2■■■□□ 2.26
SHANK2-220ENST00000608988 ADAMTS8Q9UP79 889 aa29.2■■■□□ 2.26
SHANK2-220ENST00000608988 PPP2R1AP30153 589 aa29.18■■■□□ 2.26
SHANK2-220ENST00000608988 GOLGA2Q08379 1002 aa29.18■■■□□ 2.26
SHANK2-220ENST00000608988 GSE1Q14687 1217 aa29.18■■■□□ 2.26
SHANK2-220ENST00000608988 ARHGAP5Q13017 1502 aa29.18■■■□□ 2.26
SHANK2-220ENST00000608988 MADDQ8WXG6 1647 aa29.17■■■□□ 2.26
SHANK2-220ENST00000608988 ABCC2Q92887 1545 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms