RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 UPF1Q92900 1129 aaKnown RBP eCLIP9.06□□□□□ -0.96
SRGAP2-211ENST00000604423 PCDHGA4Q9Y5G9 962 aa9.06□□□□□ -0.96
SRGAP2-211ENST00000604423 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
SRGAP2-211ENST00000604423 VARS2Q5ST30 1063 aaKnown RBP9.05□□□□□ -0.96
SRGAP2-211ENST00000604423 DDX27Q96GQ7 796 aaKnown RBP9.05□□□□□ -0.96
SRGAP2-211ENST00000604423 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
SRGAP2-211ENST00000604423 ITGAEP38570 1179 aa9.04□□□□□ -0.96
SRGAP2-211ENST00000604423 FANCIQ9NVI1 1328 aa9.03□□□□□ -0.96
SRGAP2-211ENST00000604423 SLC34A2O95436 690 aa9.02□□□□□ -0.97
SRGAP2-211ENST00000604423 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
SRGAP2-211ENST00000604423 RANGAP1P46060 587 aaPredicted RBP9□□□□□ -0.97
SRGAP2-211ENST00000604423 PTCD2Q8WV60 388 aaKnown RBP9□□□□□ -0.97
SRGAP2-211ENST00000604423 CUX2O14529 1486 aa9□□□□□ -0.97
SRGAP2-211ENST00000604423 SYNJ1O43426 1573 aa8.99□□□□□ -0.97
SRGAP2-211ENST00000604423 LHX6Q9UPM6 363 aa8.99□□□□□ -0.97
SRGAP2-211ENST00000604423 RAPGEF2Q9Y4G8 1499 aa8.99□□□□□ -0.97
SRGAP2-211ENST00000604423 RRBP1Q9P2E9 1410 aaKnown RBP8.99□□□□□ -0.97
SRGAP2-211ENST00000604423 ANP32CO43423 234 aa8.98□□□□□ -0.97
SRGAP2-211ENST00000604423 DDX10Q13206 875 aaKnown RBP8.97□□□□□ -0.97
SRGAP2-211ENST00000604423 MFSD10Q14728 455 aa8.97□□□□□ -0.97
SRGAP2-211ENST00000604423 TRIM52Q96A61 297 aa8.97□□□□□ -0.97
SRGAP2-211ENST00000604423 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
SRGAP2-211ENST00000604423 CCER2I3L3R5 266 aa8.97□□□□□ -0.97
SRGAP2-211ENST00000604423 DEKP35659 375 aaKnown RBP8.95□□□□□ -0.98
SRGAP2-211ENST00000604423 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
SRGAP2-211ENST00000604423 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
SRGAP2-211ENST00000604423 TBC1D12O60347 775 aa8.95□□□□□ -0.98
SRGAP2-211ENST00000604423 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
SRGAP2-211ENST00000604423 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
SRGAP2-211ENST00000604423 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
SRGAP2-211ENST00000604423 MAPKBP1O60336 1514 aa8.94□□□□□ -0.98
SRGAP2-211ENST00000604423 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
SRGAP2-211ENST00000604423 ARAP1Q96P48 1450 aa8.93□□□□□ -0.98
SRGAP2-211ENST00000604423 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
SRGAP2-211ENST00000604423 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
SRGAP2-211ENST00000604423 MAP3K9P80192 1104 aa8.92□□□□□ -0.98
SRGAP2-211ENST00000604423 RAB3GAP2Q9H2M9 1393 aa8.92□□□□□ -0.98
SRGAP2-211ENST00000604423 ZNF687Q8N1G0 1237 aa8.91□□□□□ -0.98
SRGAP2-211ENST00000604423 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.98
SRGAP2-211ENST00000604423 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
SRGAP2-211ENST00000604423 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.99
SRGAP2-211ENST00000604423 KANK4Q5T7N3 995 aaPredicted RBP8.89□□□□□ -0.99
SRGAP2-211ENST00000604423 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
SRGAP2-211ENST00000604423 DPYSL4O14531 572 aa8.88□□□□□ -0.99
SRGAP2-211ENST00000604423 EVI5O60447 810 aa8.88□□□□□ -0.99
SRGAP2-211ENST00000604423 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
SRGAP2-211ENST00000604423 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
SRGAP2-211ENST00000604423 NOP58Q9Y2X3 529 aaKnown RBP8.87□□□□□ -0.99
SRGAP2-211ENST00000604423 IRX6P78412 446 aaPredicted RBP8.87□□□□□ -0.99
SRGAP2-211ENST00000604423 HNRNPUQ00839 825 aaKnown RBP eCLIP8.87□□□□□ -0.99
SRGAP2-211ENST00000604423 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
SRGAP2-211ENST00000604423 ZNF454Q8N9F8 522 aa8.87□□□□□ -0.99
SRGAP2-211ENST00000604423 SETD5Q9C0A6 1442 aa8.86□□□□□ -0.99
SRGAP2-211ENST00000604423 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
SRGAP2-211ENST00000604423 NBR1Q14596 966 aa8.86□□□□□ -0.99
SRGAP2-211ENST00000604423 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
SRGAP2-211ENST00000604423 POTEEQ6S8J3 1075 aa8.85□□□□□ -0.99
SRGAP2-211ENST00000604423 PPP4R2Q9NY27 417 aa8.85□□□□□ -0.99
SRGAP2-211ENST00000604423 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
SRGAP2-211ENST00000604423 UNC13AQ9UPW8 1703 aa8.85□□□□□ -0.99
SRGAP2-211ENST00000604423 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
SRGAP2-211ENST00000604423 E2F4Q16254 413 aa8.84□□□□□ -0.99
SRGAP2-211ENST00000604423 PPP4R3BQ5MIZ7 849 aa8.83□□□□□ -1
SRGAP2-211ENST00000604423 SPNS2Q8IVW8 549 aa8.83□□□□□ -1
SRGAP2-211ENST00000604423 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
SRGAP2-211ENST00000604423 PRXQ9BXM0 1461 aa8.82□□□□□ -1
SRGAP2-211ENST00000604423 PSDA5PKW4 1024 aaPredicted RBP8.82□□□□□ -1
SRGAP2-211ENST00000604423 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
SRGAP2-211ENST00000604423 PEG3Q9GZU2 1588 aa8.82□□□□□ -1
SRGAP2-211ENST00000604423 PSEN2P49810 448 aa8.81□□□□□ -1
SRGAP2-211ENST00000604423 HAP1P54257 671 aaPredicted RBP8.81□□□□□ -1
SRGAP2-211ENST00000604423 SIN3AQ96ST3 1273 aa8.81□□□□□ -1
SRGAP2-211ENST00000604423 TIAM1Q13009 1591 aa8.81□□□□□ -1
SRGAP2-211ENST00000604423 ANP32AP39687 249 aaKnown RBP8.81□□□□□ -1
SRGAP2-211ENST00000604423 ANO8Q9HCE9 1232 aaPredicted RBP8.81□□□□□ -1
SRGAP2-211ENST00000604423 TONSLQ96HA7 1378 aa8.8□□□□□ -1
SRGAP2-211ENST00000604423 LSM11P83369 360 aaKnown RBP eCLIP8.8□□□□□ -1
SRGAP2-211ENST00000604423 KCNK17Q96T54 332 aa8.8□□□□□ -1
SRGAP2-211ENST00000604423 FOSBP53539 338 aa8.79□□□□□ -1
SRGAP2-211ENST00000604423 DDX12PQ92771 950 aa8.78□□□□□ -1
SRGAP2-211ENST00000604423 MAP3K1Q13233 1512 aa8.78□□□□□ -1
SRGAP2-211ENST00000604423 ARHGAP35Q9NRY4 1499 aa8.78□□□□□ -1
SRGAP2-211ENST00000604423 ARHGAP33O14559 1287 aa8.78□□□□□ -1
SRGAP2-211ENST00000604423 MMRN1Q13201 1228 aa8.78□□□□□ -1
SRGAP2-211ENST00000604423 JPH4Q96JJ6 628 aa8.78□□□□□ -1
SRGAP2-211ENST00000604423 PBX2P40425 430 aa8.77□□□□□ -1.01
SRGAP2-211ENST00000604423 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1.01
SRGAP2-211ENST00000604423 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
SRGAP2-211ENST00000604423 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
SRGAP2-211ENST00000604423 PCDHGA10Q9Y5H3 936 aa8.76□□□□□ -1.01
SRGAP2-211ENST00000604423 ADAM33Q9BZ11 813 aa8.76□□□□□ -1.01
SRGAP2-211ENST00000604423 CFAP43Q8NDM7 1665 aa8.76□□□□□ -1.01
SRGAP2-211ENST00000604423 ZDHHC16Q969W1 377 aa8.75□□□□□ -1.01
SRGAP2-211ENST00000604423 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
SRGAP2-211ENST00000604423 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
SRGAP2-211ENST00000604423 PDIA6Q15084 440 aa8.75□□□□□ -1.01
SRGAP2-211ENST00000604423 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
SRGAP2-211ENST00000604423 KIF27Q86VH2 1401 aa8.74□□□□□ -1.01
SRGAP2-211ENST00000604423 FHAD1B1AJZ9 1412 aa8.74□□□□□ -1.01
SRGAP2-211ENST00000604423 RBM33Q96EV2 1170 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms