RNA–Protein interactions for RNA: ENST00000604203.1

TMEM56-RWDD3-201, Transcript of TMEM56-RWDD3 readthrough, humanhuman

TSL 3

Gene TMEM56-RWDD3, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3-201ENST00000604203 COL9A1P20849 921 aa12.47□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 DPYSL4O14531 572 aa12.46□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 ANKK1Q8NFD2 765 aa12.44□□□□□ -0.42
TMEM56-RWDD3-201ENST00000604203 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
TMEM56-RWDD3-201ENST00000604203 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
TMEM56-RWDD3-201ENST00000604203 EPAS1Q99814 870 aa12.4□□□□□ -0.42
TMEM56-RWDD3-201ENST00000604203 BCAMP50895 628 aa12.38□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 C6orf132Q5T0Z8 1188 aa12.38□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 DDX12PQ92771 950 aa12.38□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 A0A0G2JS52 829 aa12.36□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 SEPT9Q9UHD8 586 aaPredicted RBP12.36□□□□□ -0.43
TMEM56-RWDD3-201ENST00000604203 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 TRIM6-TRIM34B2RNG4 842 aa12.31□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 RGS20O76081 388 aa12.31□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 NBR1Q14596 966 aa12.31□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 MAP3K7O43318 606 aa12.3□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
TMEM56-RWDD3-201ENST00000604203 EN1Q05925 392 aaPredicted RBP12.27□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 PDIA6Q15084 440 aa12.27□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 ITGBL1O95965 494 aaPredicted RBP12.26□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 NYAP1Q6ZVC0 841 aa12.25□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 LRCH3Q96II8 777 aa12.25□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
TMEM56-RWDD3-201ENST00000604203 E2F4Q16254 413 aa12.2□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 KCNC4Q03721 635 aa12.19□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 CDCA7LQ96GN5 454 aa12.16□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 SMAPO00193 183 aa12.15□□□□□ -0.46
TMEM56-RWDD3-201ENST00000604203 PRSS12P56730 875 aa12.13□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 PPP4CP60510 307 aa12.12□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 FAM198AQ9UFP1 575 aa12.09□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 PNMA3Q9UL41 463 aa12.09□□□□□ -0.47
TMEM56-RWDD3-201ENST00000604203 RNF40O75150 1001 aa12.08□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 CDHR5Q9HBB8 845 aa12.08□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 TATDN2Q93075 761 aa12.07□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 OSBPP22059 807 aa12.04□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
TMEM56-RWDD3-201ENST00000604203 Q6ZNB5 142 aa12.02□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 RBM27Q9P2N5 1060 aaKnown RBP12□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 MTRQ99707 1265 aa11.99□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
TMEM56-RWDD3-201ENST00000604203 APLP1P51693 650 aa11.93□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 ZNF516Q92618 1163 aa11.91□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 PRKD2Q9BZL6 878 aa11.91□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 SLF2Q8IX21 1173 aa11.9□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
TMEM56-RWDD3-201ENST00000604203 LAPTM4AQ15012 233 aa11.89□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 GFRA3O60609 400 aa11.88□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 COPS2P61201 443 aa11.88□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 MLLT3P42568 568 aaPredicted RBP11.86□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
TMEM56-RWDD3-201ENST00000604203 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
TMEM56-RWDD3-201ENST00000604203 EYA1Q99502 592 aa11.83□□□□□ -0.52
TMEM56-RWDD3-201ENST00000604203 GGCXP38435 758 aa11.82□□□□□ -0.52
TMEM56-RWDD3-201ENST00000604203 V9GY48 417 aaPredicted RBP11.81□□□□□ -0.52
TMEM56-RWDD3-201ENST00000604203 PRR14Q9BWN1 585 aa11.79□□□□□ -0.52
TMEM56-RWDD3-201ENST00000604203 PCDHB3Q9Y5E6 796 aa11.78□□□□□ -0.52
TMEM56-RWDD3-201ENST00000604203 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
TMEM56-RWDD3-201ENST00000604203 NRG2O14511 850 aaPredicted RBP11.77□□□□□ -0.53
TMEM56-RWDD3-201ENST00000604203 DNAJB2P25686 324 aa11.77□□□□□ -0.53
TMEM56-RWDD3-201ENST00000604203 PTGDRQ13258 359 aa11.77□□□□□ -0.53
TMEM56-RWDD3-201ENST00000604203 TRAF7Q6Q0C0 670 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms