RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 LARP6Q9BRS8 491 aaKnown RBP4.7□□□□□ -1.66
CEP290-208ENST00000604024 SPDYE16A6NNV3 312 aaPredicted RBP4.69□□□□□ -1.66
CEP290-208ENST00000604024 ITGBL1O95965 494 aaPredicted RBP4.68□□□□□ -1.66
CEP290-208ENST00000604024 UPF1Q92900 1129 aaKnown RBP eCLIP4.68□□□□□ -1.66
CEP290-208ENST00000604024 WNT2BQ93097 391 aa4.68□□□□□ -1.66
CEP290-208ENST00000604024 ARIH1Q9Y4X5 557 aaPredicted RBP4.68□□□□□ -1.66
CEP290-208ENST00000604024 ANKK1Q8NFD2 765 aa4.68□□□□□ -1.66
CEP290-208ENST00000604024 ADAM33Q9BZ11 813 aa4.68□□□□□ -1.66
CEP290-208ENST00000604024 BBXQ8WY36 941 aaPredicted RBP4.67□□□□□ -1.66
CEP290-208ENST00000604024 PCDHGA10Q9Y5H3 936 aa4.66□□□□□ -1.66
CEP290-208ENST00000604024 CERKQ8TCT0 537 aa4.65□□□□□ -1.66
CEP290-208ENST00000604024 EMILIN3Q9NT22 766 aa4.65□□□□□ -1.67
CEP290-208ENST00000604024 SOWAHBA6NEL2 793 aa4.64□□□□□ -1.67
CEP290-208ENST00000604024 NECTIN2Q92692 538 aa4.64□□□□□ -1.67
CEP290-208ENST00000604024 TRIM6-TRIM34B2RNG4 842 aa4.63□□□□□ -1.67
CEP290-208ENST00000604024 LAPTM4AQ15012 233 aa4.63□□□□□ -1.67
CEP290-208ENST00000604024 C6orf132Q5T0Z8 1188 aa4.62□□□□□ -1.67
CEP290-208ENST00000604024 PTPN5P54829 565 aa4.62□□□□□ -1.67
CEP290-208ENST00000604024 FAM98CQ17RN3 349 aaKnown RBP4.62□□□□□ -1.67
CEP290-208ENST00000604024 PACS2Q86VP3 889 aa4.62□□□□□ -1.67
CEP290-208ENST00000604024 RBM27Q9P2N5 1060 aaKnown RBP4.61□□□□□ -1.67
CEP290-208ENST00000604024 TSR3Q9UJK0 312 aaKnown RBP4.61□□□□□ -1.67
CEP290-208ENST00000604024 COL9A1P20849 921 aa4.61□□□□□ -1.67
CEP290-208ENST00000604024 KIAA1468Q9P260 1216 aa4.61□□□□□ -1.67
CEP290-208ENST00000604024 KCNC4Q03721 635 aa4.6□□□□□ -1.67
CEP290-208ENST00000604024 PDIA6Q15084 440 aa4.6□□□□□ -1.67
CEP290-208ENST00000604024 EN1Q05925 392 aaPredicted RBP4.59□□□□□ -1.67
CEP290-208ENST00000604024 CADPS2Q86UW7 1296 aa4.59□□□□□ -1.67
CEP290-208ENST00000604024 ZFRQ96KR1 1074 aaKnown RBP4.59□□□□□ -1.67
CEP290-208ENST00000604024 LRCH3Q96II8 777 aa4.58□□□□□ -1.68
CEP290-208ENST00000604024 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.58□□□□□ -1.68
CEP290-208ENST00000604024 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.57□□□□□ -1.68
CEP290-208ENST00000604024 NBPF26B4DH59 902 aa4.56□□□□□ -1.68
CEP290-208ENST00000604024 PRSS12P56730 875 aa4.56□□□□□ -1.68
CEP290-208ENST00000604024 PROX2Q3B8N5 592 aa4.56□□□□□ -1.68
CEP290-208ENST00000604024 DPYSL4O14531 572 aa4.56□□□□□ -1.68
CEP290-208ENST00000604024 SPRYD3Q8NCJ5 442 aa4.56□□□□□ -1.68
CEP290-208ENST00000604024 TTC13Q8NBP0 860 aa4.55□□□□□ -1.68
CEP290-208ENST00000604024 IL21Q9HBE4 155 aa4.55□□□□□ -1.68
CEP290-208ENST00000604024 PPP4CP60510 307 aa4.54□□□□□ -1.68
CEP290-208ENST00000604024 E2F4Q16254 413 aa4.54□□□□□ -1.68
CEP290-208ENST00000604024 HPS5Q9UPZ3 1129 aa4.54□□□□□ -1.68
CEP290-208ENST00000604024 WDR70Q9NW82 654 aa4.54□□□□□ -1.68
CEP290-208ENST00000604024 BCAMP50895 628 aa4.53□□□□□ -1.68
CEP290-208ENST00000604024 HDGFP51858 240 aaKnown RBP4.53□□□□□ -1.68
CEP290-208ENST00000604024 PRR14Q9BWN1 585 aa4.53□□□□□ -1.68
CEP290-208ENST00000604024 V9GY48 417 aaPredicted RBP4.53□□□□□ -1.68
CEP290-208ENST00000604024 DCAF8L2P0C7V8 631 aa4.53□□□□□ -1.68
CEP290-208ENST00000604024 AMER1Q5JTC6 1135 aaPredicted RBP4.53□□□□□ -1.68
CEP290-208ENST00000604024 SLC4A3P48751 1232 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 NBR1Q14596 966 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 TATDN2Q93075 761 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 WBP1LQ9NX94 342 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 CDCA7LQ96GN5 454 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 TMUB1Q9BVT8 246 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 TSKSQ9UJT2 592 aa4.52□□□□□ -1.69
CEP290-208ENST00000604024 NRG2O14511 850 aaPredicted RBP4.51□□□□□ -1.69
CEP290-208ENST00000604024 MAP3K7O43318 606 aa4.51□□□□□ -1.69
CEP290-208ENST00000604024 SLF2Q8IX21 1173 aa4.51□□□□□ -1.69
CEP290-208ENST00000604024 GGCXP38435 758 aa4.51□□□□□ -1.69
CEP290-208ENST00000604024 TJAP1Q5JTD0 557 aa4.51□□□□□ -1.69
CEP290-208ENST00000604024 RBM33Q96EV2 1170 aaKnown RBP4.51□□□□□ -1.69
CEP290-208ENST00000604024 SUZ12Q15022 739 aaKnown RBP4.5□□□□□ -1.69
CEP290-208ENST00000604024 DDX12PQ92771 950 aa4.49□□□□□ -1.69
CEP290-208ENST00000604024 OSBPP22059 807 aa4.49□□□□□ -1.69
CEP290-208ENST00000604024 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.49□□□□□ -1.69
CEP290-208ENST00000604024 PNMA3Q9UL41 463 aa4.49□□□□□ -1.69
CEP290-208ENST00000604024 SEPT9Q9UHD8 586 aaPredicted RBP4.48□□□□□ -1.69
CEP290-208ENST00000604024 STK17AQ9UEE5 414 aa4.48□□□□□ -1.69
CEP290-208ENST00000604024 ARHGEF1Q92888 912 aaKnown RBP4.47□□□□□ -1.69
CEP290-208ENST00000604024 XP32Q5T750 250 aa4.47□□□□□ -1.69
CEP290-208ENST00000604024 FAM198AQ9UFP1 575 aa4.47□□□□□ -1.69
CEP290-208ENST00000604024 SAMD7Q7Z3H4 446 aa4.46□□□□□ -1.69
CEP290-208ENST00000604024 TSR1Q2NL82 804 aaKnown RBP4.46□□□□□ -1.7
CEP290-208ENST00000604024 MTRQ99707 1265 aa4.45□□□□□ -1.7
CEP290-208ENST00000604024 EYA1Q99502 592 aa4.45□□□□□ -1.7
CEP290-208ENST00000604024 LMOD2Q6P5Q4 547 aa4.44□□□□□ -1.7
CEP290-208ENST00000604024 NUDT18Q6ZVK8 323 aa4.44□□□□□ -1.7
CEP290-208ENST00000604024 GFRA3O60609 400 aa4.44□□□□□ -1.7
CEP290-208ENST00000604024 Q6ZNB5 142 aa4.44□□□□□ -1.7
CEP290-208ENST00000604024 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
CEP290-208ENST00000604024 PRIM1P49642 420 aaKnown RBP4.43□□□□□ -1.7
CEP290-208ENST00000604024 KMT5BQ4FZB7 885 aa4.43□□□□□ -1.7
CEP290-208ENST00000604024 TRAF7Q6Q0C0 670 aa4.43□□□□□ -1.7
CEP290-208ENST00000604024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.43□□□□□ -1.7
CEP290-208ENST00000604024 GRXCR2A6NFK2 248 aa4.43□□□□□ -1.7
CEP290-208ENST00000604024 DGAT1O75907 488 aa4.43□□□□□ -1.7
CEP290-208ENST00000604024 DNAJB2P25686 324 aa4.43□□□□□ -1.7
CEP290-208ENST00000604024 RBM46Q8TBY0 533 aaKnown RBP4.43□□□□□ -1.7
CEP290-208ENST00000604024 NPDC1Q9NQX5 325 aaPredicted RBP4.43□□□□□ -1.7
CEP290-208ENST00000604024 BTBD11A6QL63 1104 aa4.42□□□□□ -1.7
CEP290-208ENST00000604024 PRKD2Q9BZL6 878 aa4.42□□□□□ -1.7
CEP290-208ENST00000604024 SWT1Q5T5J6 900 aaKnown RBP4.42□□□□□ -1.7
CEP290-208ENST00000604024 RSPH4AQ5TD94 716 aa4.42□□□□□ -1.7
CEP290-208ENST00000604024 PAXIP1Q6ZW49 1069 aaPredicted RBP4.42□□□□□ -1.7
CEP290-208ENST00000604024 ACTN4O43707 911 aaKnown RBP4.41□□□□□ -1.7
CEP290-208ENST00000604024 PPP1R18Q6NYC8 613 aa4.41□□□□□ -1.7
CEP290-208ENST00000604024 PADI6Q6TGC4 694 aa4.41□□□□□ -1.7
CEP290-208ENST00000604024 APLP1P51693 650 aa4.41□□□□□ -1.7
CEP290-208ENST00000604024 ZPR1O75312 459 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms