RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
CEP290-208ENST00000604024 CHIC1Q5VXU3 224 aa11.05□□□□□ -0.64
CEP290-208ENST00000604024 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
CEP290-208ENST00000604024 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
CEP290-208ENST00000604024 PHF23Q9BUL5 403 aaPredicted RBP9.76□□□□□ -0.85
CEP290-208ENST00000604024 FOXD1Q16676 465 aa9.2□□□□□ -0.94
CEP290-208ENST00000604024 PLPPR3Q6T4P5 718 aa8.82□□□□□ -1
CEP290-208ENST00000604024 MSH5O43196 834 aa8.79□□□□□ -1
CEP290-208ENST00000604024 PIAS4Q8N2W9 510 aaPredicted RBP8.57□□□□□ -1.04
CEP290-208ENST00000604024 PPP6R1Q9UPN7 881 aa8.47□□□□□ -1.05
CEP290-208ENST00000604024 ADRA2BP18089 450 aa8.46□□□□□ -1.06
CEP290-208ENST00000604024 POTEHQ6S545 545 aa8.3□□□□□ -1.08
CEP290-208ENST00000604024 CACNB1Q02641 598 aaPredicted RBP8.25□□□□□ -1.09
CEP290-208ENST00000604024 SCAF1Q9H7N4 1312 aaKnown RBP7.99□□□□□ -1.13
CEP290-208ENST00000604024 DMRT2Q9Y5R5 561 aa7.93□□□□□ -1.14
CEP290-208ENST00000604024 MAPK8IP2Q13387 824 aaPredicted RBP7.75□□□□□ -1.17
CEP290-208ENST00000604024 PPP4R3CPQ6ZMV5 832 aa7.68□□□□□ -1.18
CEP290-208ENST00000604024 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
CEP290-208ENST00000604024 CNKSR2Q8WXI2 1034 aa7.62□□□□□ -1.19
CEP290-208ENST00000604024 DNAJC5BQ9UF47 199 aa7.58□□□□□ -1.2
CEP290-208ENST00000604024 RNF216Q9NWF9 866 aaPredicted RBP7.57□□□□□ -1.2
CEP290-208ENST00000604024 NCBP3Q53F19 620 aaKnown RBP7.5□□□□□ -1.21
CEP290-208ENST00000604024 RNF39Q9H2S5 420 aa7.41□□□□□ -1.22
CEP290-208ENST00000604024 DCAF8L1A6NGE4 600 aa7.39□□□□□ -1.23
CEP290-208ENST00000604024 C1QBPQ07021 282 aaKnown RBP7.38□□□□□ -1.23
CEP290-208ENST00000604024 PLSCR2Q9NRY7 297 aa7.38□□□□□ -1.23
CEP290-208ENST00000604024 NPM3O75607 178 aaKnown RBP7.22□□□□□ -1.25
CEP290-208ENST00000604024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.18□□□□□ -1.26
CEP290-208ENST00000604024 SP7Q8TDD2 431 aaPredicted RBP7.07□□□□□ -1.28
CEP290-208ENST00000604024 APLP2Q06481 763 aa7.07□□□□□ -1.28
CEP290-208ENST00000604024 U3KPZ7 1027 aaPredicted RBP7□□□□□ -1.29
CEP290-208ENST00000604024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.97□□□□□ -1.29
CEP290-208ENST00000604024 HNRNPUL2Q1KMD3 747 aaKnown RBP6.97□□□□□ -1.29
CEP290-208ENST00000604024 KCNA4P22459 653 aa6.97□□□□□ -1.29
CEP290-208ENST00000604024 DSG3P32926 999 aa6.9□□□□□ -1.3
CEP290-208ENST00000604024 SLC4A2P04920 1241 aa6.89□□□□□ -1.31
CEP290-208ENST00000604024 SAMD1Q6SPF0 538 aaPredicted RBP6.89□□□□□ -1.31
CEP290-208ENST00000604024 CAPN15O75808 1086 aa6.87□□□□□ -1.31
CEP290-208ENST00000604024 ZNF219Q9P2Y4 722 aaPredicted RBP6.87□□□□□ -1.31
CEP290-208ENST00000604024 SPINK5Q9NQ38 1064 aaPredicted RBP6.82□□□□□ -1.32
CEP290-208ENST00000604024 PCDH10Q9P2E7 1040 aa6.81□□□□□ -1.32
CEP290-208ENST00000604024 MYCNP04198 464 aaPredicted RBP6.78□□□□□ -1.32
CEP290-208ENST00000604024 TRHP20396 242 aaPredicted RBP6.71□□□□□ -1.34
CEP290-208ENST00000604024 RBM42Q9BTD8 480 aaKnown RBP6.7□□□□□ -1.34
CEP290-208ENST00000604024 FOXD4L1Q9NU39 408 aa6.66□□□□□ -1.34
CEP290-208ENST00000604024 SLC4A1APQ9BWU0 796 aaKnown RBP6.66□□□□□ -1.34
CEP290-208ENST00000604024 ZBTB12Q9Y330 459 aaPredicted RBP6.65□□□□□ -1.34
CEP290-208ENST00000604024 ABCB7O75027 752 aa6.63□□□□□ -1.35
CEP290-208ENST00000604024 ATXN8OSP0DMR3 200 aa6.6□□□□□ -1.35
CEP290-208ENST00000604024 LHX8Q68G74 356 aa6.59□□□□□ -1.35
CEP290-208ENST00000604024 POLA2Q14181 598 aa6.55□□□□□ -1.36
CEP290-208ENST00000604024 AKT1S1Q96B36 256 aa6.53□□□□□ -1.36
CEP290-208ENST00000604024 CHRDL2Q6WN34 429 aa6.44□□□□□ -1.38
CEP290-208ENST00000604024 ATF5Q9Y2D1 282 aaPredicted RBP6.43□□□□□ -1.38
CEP290-208ENST00000604024 FBLN2P98095 1184 aa6.39□□□□□ -1.39
CEP290-208ENST00000604024 REM2Q8IYK8 340 aaPredicted RBP6.37□□□□□ -1.39
CEP290-208ENST00000604024 SPDYE2BA6NHP3 402 aa6.37□□□□□ -1.39
CEP290-208ENST00000604024 ZBTB22O15209 634 aa6.37□□□□□ -1.39
CEP290-208ENST00000604024 SPDYE6P0CI01 402 aa6.37□□□□□ -1.39
CEP290-208ENST00000604024 SPDYE2Q495Y8 402 aa6.37□□□□□ -1.39
CEP290-208ENST00000604024 FXR2P51116 673 aaKnown RBP eCLIP6.32□□□□□ -1.4
CEP290-208ENST00000604024 OSCARQ8IYS5 282 aa6.31□□□□□ -1.4
CEP290-208ENST00000604024 PIP4P2Q8N4L2 257 aa6.28□□□□□ -1.4
CEP290-208ENST00000604024 PITPNM1O00562 1244 aa6.26□□□□□ -1.41
CEP290-208ENST00000604024 SPDYE1Q8NFV5 336 aaPredicted RBP6.26□□□□□ -1.41
CEP290-208ENST00000604024 SSUH2Q9Y2M2 353 aa6.26□□□□□ -1.41
CEP290-208ENST00000604024 POTEMA6NI47 508 aa6.19□□□□□ -1.42
CEP290-208ENST00000604024 MKRN4PQ13434 485 aaPredicted RBP6.19□□□□□ -1.42
CEP290-208ENST00000604024 ZNF692Q9BU19 519 aaPredicted RBP6.18□□□□□ -1.42
CEP290-208ENST00000604024 CLCN6P51797 869 aa6.14□□□□□ -1.43
CEP290-208ENST00000604024 HAX1O00165 279 aa6.13□□□□□ -1.43
CEP290-208ENST00000604024 C19orf67A6NJJ6 358 aa6.12□□□□□ -1.43
CEP290-208ENST00000604024 POTEGQ6S5H5 508 aa6.12□□□□□ -1.43
CEP290-208ENST00000604024 PRKAR2AP13861 404 aaKnown RBP6.11□□□□□ -1.43
CEP290-208ENST00000604024 CSRNP3Q8WYN3 585 aa6.1□□□□□ -1.43
CEP290-208ENST00000604024 STAG3Q9UJ98 1225 aa6.09□□□□□ -1.43
CEP290-208ENST00000604024 CLEC11AQ9Y240 323 aa6.07□□□□□ -1.44
CEP290-208ENST00000604024 PRR29P0C7W0 189 aa6.06□□□□□ -1.44
CEP290-208ENST00000604024 PABPN1Q86U42 306 aaKnown RBP eCLIP6.06□□□□□ -1.44
CEP290-208ENST00000604024 EVX2Q03828 476 aa5.97□□□□□ -1.45
CEP290-208ENST00000604024 GABBR2O75899 941 aa5.97□□□□□ -1.45
CEP290-208ENST00000604024 FARP1Q9Y4F1 1045 aaPredicted RBP5.97□□□□□ -1.45
CEP290-208ENST00000604024 SPDYE4A6NLX3 237 aa5.93□□□□□ -1.46
CEP290-208ENST00000604024 ZNF579Q8NAF0 562 aaKnown RBP5.92□□□□□ -1.46
CEP290-208ENST00000604024 CHADLQ6NUI6 762 aa5.92□□□□□ -1.46
CEP290-208ENST00000604024 CREBZFQ9NS37 354 aa5.92□□□□□ -1.46
CEP290-208ENST00000604024 NPM1P06748 294 aaKnown RBP eCLIP5.91□□□□□ -1.46
CEP290-208ENST00000604024 CD44P16070 742 aaKnown RBP5.91□□□□□ -1.46
CEP290-208ENST00000604024 PROM2Q8N271 834 aa5.89□□□□□ -1.47
CEP290-208ENST00000604024 PAK3O75914 559 aaPredicted RBP5.87□□□□□ -1.47
CEP290-208ENST00000604024 EHMT2Q96KQ7 1210 aa5.85□□□□□ -1.47
CEP290-208ENST00000604024 ZRANB1Q9UGI0 708 aa5.83□□□□□ -1.48
CEP290-208ENST00000604024 DCBLD2Q96PD2 775 aa5.8□□□□□ -1.48
CEP290-208ENST00000604024 POTEIP0CG38 1075 aa5.79□□□□□ -1.48
CEP290-208ENST00000604024 MNX1P50219 401 aaPredicted RBP5.78□□□□□ -1.48
CEP290-208ENST00000604024 PLEKHG5O94827 1062 aa5.76□□□□□ -1.49
CEP290-208ENST00000604024 ZBTB47Q9UFB7 747 aaPredicted RBP5.72□□□□□ -1.49
CEP290-208ENST00000604024 SLC39A7Q92504 469 aa5.71□□□□□ -1.5
CEP290-208ENST00000604024 SGIP1Q9BQI5 828 aa5.71□□□□□ -1.5
CEP290-208ENST00000604024 ASTLQ6HA08 431 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms