RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
KDM1A-206ENST00000602503 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
KDM1A-206ENST00000602503 GOLGA6L3A6NEY3 463 aa10.07□□□□□ -0.8
KDM1A-206ENST00000602503 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
KDM1A-206ENST00000602503 KDM5BQ9UGL1 1544 aa10.06□□□□□ -0.8
KDM1A-206ENST00000602503 KIAA0586Q9BVV6 1533 aa10.05□□□□□ -0.8
KDM1A-206ENST00000602503 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
KDM1A-206ENST00000602503 UTP14CQ5TAP6 766 aaKnown RBP10.05□□□□□ -0.8
KDM1A-206ENST00000602503 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
KDM1A-206ENST00000602503 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
KDM1A-206ENST00000602503 RGS3P49796 1198 aa10.04□□□□□ -0.8
KDM1A-206ENST00000602503 ESPNB1AK53 854 aa10.03□□□□□ -0.8
KDM1A-206ENST00000602503 CANXP27824 592 aaKnown RBP10.03□□□□□ -0.8
KDM1A-206ENST00000602503 MRE11P49959 708 aa10.03□□□□□ -0.8
KDM1A-206ENST00000602503 RRP1P56182 461 aaKnown RBP10.03□□□□□ -0.8
KDM1A-206ENST00000602503 GRIN2AQ12879 1464 aa10.03□□□□□ -0.8
KDM1A-206ENST00000602503 FSD2A1L4K1 749 aa10.03□□□□□ -0.8
KDM1A-206ENST00000602503 TNNT2P45379 298 aaPredicted RBP10.03□□□□□ -0.8
KDM1A-206ENST00000602503 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
KDM1A-206ENST00000602503 SLC4A2P04920 1241 aa10.02□□□□□ -0.8
KDM1A-206ENST00000602503 ADCY10Q96PN6 1610 aa10.02□□□□□ -0.81
KDM1A-206ENST00000602503 POLR1AO95602 1720 aaPredicted RBP10.02□□□□□ -0.81
KDM1A-206ENST00000602503 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
KDM1A-206ENST00000602503 BECN1Q14457 450 aa10.02□□□□□ -0.81
KDM1A-206ENST00000602503 RAPGEF6Q8TEU7 1601 aa10.02□□□□□ -0.81
KDM1A-206ENST00000602503 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
KDM1A-206ENST00000602503 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
KDM1A-206ENST00000602503 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
KDM1A-206ENST00000602503 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
KDM1A-206ENST00000602503 XRCC6P12956 609 aaKnown RBP eCLIP10.01□□□□□ -0.81
KDM1A-206ENST00000602503 IPO4Q8TEX9 1081 aaKnown RBP10.01□□□□□ -0.81
KDM1A-206ENST00000602503 MYH16Q9H6N6 1097 aa10.01□□□□□ -0.81
KDM1A-206ENST00000602503 NAP1L2Q9ULW6 460 aaPredicted RBP10.01□□□□□ -0.81
KDM1A-206ENST00000602503 ADGBQ8N7X0 1667 aa10□□□□□ -0.81
KDM1A-206ENST00000602503 CCDC184Q52MB2 194 aa10□□□□□ -0.81
KDM1A-206ENST00000602503 POGKQ9P215 609 aa10□□□□□ -0.81
KDM1A-206ENST00000602503 TRIM44Q96DX7 344 aaPredicted RBP10□□□□□ -0.81
KDM1A-206ENST00000602503 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
KDM1A-206ENST00000602503 MAGI1Q96QZ7 1491 aaPredicted RBP9.99□□□□□ -0.81
KDM1A-206ENST00000602503 SYNJ2O15056 1496 aa9.99□□□□□ -0.81
KDM1A-206ENST00000602503 DISP1Q96F81 1524 aa9.98□□□□□ -0.81
KDM1A-206ENST00000602503 NCOA1Q15788 1441 aa9.98□□□□□ -0.81
KDM1A-206ENST00000602503 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
KDM1A-206ENST00000602503 TAF3Q5VWG9 929 aa9.98□□□□□ -0.81
KDM1A-206ENST00000602503 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
KDM1A-206ENST00000602503 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
KDM1A-206ENST00000602503 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
KDM1A-206ENST00000602503 DAPK1P53355 1430 aa9.97□□□□□ -0.81
KDM1A-206ENST00000602503 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
KDM1A-206ENST00000602503 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
KDM1A-206ENST00000602503 CHD1O14646 1710 aa9.97□□□□□ -0.81
KDM1A-206ENST00000602503 KTN1Q86UP2 1357 aaKnown RBP9.97□□□□□ -0.81
KDM1A-206ENST00000602503 CROCC2H7BZ55 1655 aa9.97□□□□□ -0.81
KDM1A-206ENST00000602503 CDK13Q14004 1512 aaKnown RBP9.97□□□□□ -0.81
KDM1A-206ENST00000602503 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
KDM1A-206ENST00000602503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.97□□□□□ -0.813e-8■□□□□ 8.6
KDM1A-206ENST00000602503 ADGRL2O95490 1459 aa9.96□□□□□ -0.81
KDM1A-206ENST00000602503 KIF20AO95235 890 aa9.96□□□□□ -0.81
KDM1A-206ENST00000602503 RPRD2Q5VT52 1461 aaKnown RBP9.96□□□□□ -0.82
KDM1A-206ENST00000602503 ERCC6L2Q5T890 1561 aa9.96□□□□□ -0.82
KDM1A-206ENST00000602503 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.82
KDM1A-206ENST00000602503 NUP153P49790 1475 aaKnown RBP9.96□□□□□ -0.82
KDM1A-206ENST00000602503 KIAA1211Q6ZU35 1233 aa9.95□□□□□ -0.82
KDM1A-206ENST00000602503 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
KDM1A-206ENST00000602503 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
KDM1A-206ENST00000602503 OFD1O75665 1012 aa9.94□□□□□ -0.82
KDM1A-206ENST00000602503 DMTNQ08495 405 aa9.94□□□□□ -0.82
KDM1A-206ENST00000602503 PLB1Q6P1J6 1458 aa9.94□□□□□ -0.82
KDM1A-206ENST00000602503 KDM6BO15054 1643 aa9.94□□□□□ -0.82
KDM1A-206ENST00000602503 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
KDM1A-206ENST00000602503 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
KDM1A-206ENST00000602503 ARXQ96QS3 562 aa9.93□□□□□ -0.82
KDM1A-206ENST00000602503 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
KDM1A-206ENST00000602503 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
KDM1A-206ENST00000602503 ABCC5O15440 1437 aa9.93□□□□□ -0.82
KDM1A-206ENST00000602503 PRG4Q92954 1404 aaPredicted RBP9.93□□□□□ -0.82
KDM1A-206ENST00000602503 ANKRD30BQ9BXX2 1392 aa9.92□□□□□ -0.82
KDM1A-206ENST00000602503 SHANK2Q9UPX8 1470 aa9.92□□□□□ -0.82
KDM1A-206ENST00000602503 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
KDM1A-206ENST00000602503 TEX14Q8IWB6 1497 aa9.92□□□□□ -0.82
KDM1A-206ENST00000602503 ZBTB22O15209 634 aa9.92□□□□□ -0.82
KDM1A-206ENST00000602503 VGFO15240 615 aaPredicted RBP9.91□□□□□ -0.82
KDM1A-206ENST00000602503 LETM1O95202 739 aaPredicted RBP9.91□□□□□ -0.82
KDM1A-206ENST00000602503 MPHOSPH9Q99550 1183 aa9.91□□□□□ -0.82
KDM1A-206ENST00000602503 GRPEL1Q9HAV7 217 aa9.91□□□□□ -0.82
KDM1A-206ENST00000602503 PTMSP20962 102 aa9.91□□□□□ -0.82
KDM1A-206ENST00000602503 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
KDM1A-206ENST00000602503 DYNC1I1O14576 645 aa9.9□□□□□ -0.82
KDM1A-206ENST00000602503 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
KDM1A-206ENST00000602503 ZNF777Q9ULD5 760 aaPredicted RBP9.9□□□□□ -0.82
KDM1A-206ENST00000602503 CARMIL2Q6F5E8 1435 aa9.9□□□□□ -0.82
KDM1A-206ENST00000602503 NUP160Q12769 1436 aa9.9□□□□□ -0.82
KDM1A-206ENST00000602503 KDM5DQ9BY66 1539 aa9.89□□□□□ -0.83
KDM1A-206ENST00000602503 CAMSAP2Q08AD1 1489 aa9.89□□□□□ -0.83
KDM1A-206ENST00000602503 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
KDM1A-206ENST00000602503 HS1BP3Q53T59 392 aa9.88□□□□□ -0.83
KDM1A-206ENST00000602503 ZSCAN30Q86W11 494 aa9.88□□□□□ -0.83
KDM1A-206ENST00000602503 PNISRQ8TF01 805 aaKnown RBP9.88□□□□□ -0.83
KDM1A-206ENST00000602503 ANP32BQ92688 251 aaKnown RBP9.88□□□□□ -0.83
KDM1A-206ENST00000602503 MBD5Q9P267 1494 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms