RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
NFKB1-212ENST00000600343 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.42
NFKB1-212ENST00000600343 PPP1R9BQ96SB3 815 aa12.46□□□□□ -0.42
NFKB1-212ENST00000600343 KDM5BQ9UGL1 1544 aa12.46□□□□□ -0.42
NFKB1-212ENST00000600343 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.42
NFKB1-212ENST00000600343 SASS6Q6UVJ0 657 aa12.45□□□□□ -0.42
NFKB1-212ENST00000600343 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
NFKB1-212ENST00000600343 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
NFKB1-212ENST00000600343 NASPP49321 788 aaPredicted RBP12.43□□□□□ -0.42
NFKB1-212ENST00000600343 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
NFKB1-212ENST00000600343 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
NFKB1-212ENST00000600343 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
NFKB1-212ENST00000600343 MYOM3Q5VTT5 1437 aa12.43□□□□□ -0.42
NFKB1-212ENST00000600343 ZNF500O60304 480 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-212ENST00000600343 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-212ENST00000600343 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-212ENST00000600343 SEC24BO95487 1268 aa12.41□□□□□ -0.42
NFKB1-212ENST00000600343 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
NFKB1-212ENST00000600343 C20orf194Q5TEA3 1177 aa12.4□□□□□ -0.42
NFKB1-212ENST00000600343 ZNF771Q7L3S4 317 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-212ENST00000600343 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
NFKB1-212ENST00000600343 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
NFKB1-212ENST00000600343 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.43
NFKB1-212ENST00000600343 AEBP1Q8IUX7 1158 aa12.4□□□□□ -0.43
NFKB1-212ENST00000600343 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
NFKB1-212ENST00000600343 KCNJ4P48050 445 aa12.39□□□□□ -0.43
NFKB1-212ENST00000600343 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
NFKB1-212ENST00000600343 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
NFKB1-212ENST00000600343 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
NFKB1-212ENST00000600343 IGSF3O75054 1194 aa12.38□□□□□ -0.43
NFKB1-212ENST00000600343 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
NFKB1-212ENST00000600343 POLR3GLQ9BT43 218 aa12.38□□□□□ -0.43
NFKB1-212ENST00000600343 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
NFKB1-212ENST00000600343 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
NFKB1-212ENST00000600343 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
NFKB1-212ENST00000600343 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
NFKB1-212ENST00000600343 CCDC18Q5T9S5 1454 aa12.37□□□□□ -0.43
NFKB1-212ENST00000600343 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
NFKB1-212ENST00000600343 SLC20A2Q08357 652 aa12.37□□□□□ -0.43
NFKB1-212ENST00000600343 PANK3Q9H999 370 aa12.37□□□□□ -0.43
NFKB1-212ENST00000600343 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
NFKB1-212ENST00000600343 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
NFKB1-212ENST00000600343 SKOR2Q2VWA4 1001 aaPredicted RBP12.35□□□□□ -0.43
NFKB1-212ENST00000600343 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
NFKB1-212ENST00000600343 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
NFKB1-212ENST00000600343 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
NFKB1-212ENST00000600343 MYRIPQ8NFW9 859 aa12.34□□□□□ -0.43
NFKB1-212ENST00000600343 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
NFKB1-212ENST00000600343 ZKSCAN5Q9Y2L8 839 aa12.34□□□□□ -0.43
NFKB1-212ENST00000600343 ZNF710Q8N1W2 664 aa12.33□□□□□ -0.44
NFKB1-212ENST00000600343 TBC1D32Q96NH3 1257 aa12.33□□□□□ -0.44
NFKB1-212ENST00000600343 HDAC5Q9UQL6 1122 aa12.32□□□□□ -0.44
NFKB1-212ENST00000600343 CNPY4Q8N129 248 aa12.32□□□□□ -0.44
NFKB1-212ENST00000600343 TSC1Q92574 1164 aa12.32□□□□□ -0.44
NFKB1-212ENST00000600343 TIAM1Q13009 1591 aa12.32□□□□□ -0.44
NFKB1-212ENST00000600343 JARID2Q92833 1246 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-212ENST00000600343 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
NFKB1-212ENST00000600343 APPP05067 770 aa12.31□□□□□ -0.44
NFKB1-212ENST00000600343 MCM5P33992 734 aa12.31□□□□□ -0.44
NFKB1-212ENST00000600343 PTMSP20962 102 aa12.3□□□□□ -0.44
NFKB1-212ENST00000600343 P3H3Q8IVL6 736 aa12.3□□□□□ -0.44
NFKB1-212ENST00000600343 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-212ENST00000600343 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
NFKB1-212ENST00000600343 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
NFKB1-212ENST00000600343 KCNG1Q9UIX4 513 aa12.29□□□□□ -0.44
NFKB1-212ENST00000600343 MAPK8IP3Q9UPT6 1336 aa12.29□□□□□ -0.44
NFKB1-212ENST00000600343 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
NFKB1-212ENST00000600343 CLGNO14967 610 aa12.29□□□□□ -0.44
NFKB1-212ENST00000600343 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
NFKB1-212ENST00000600343 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-212ENST00000600343 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
NFKB1-212ENST00000600343 TIGD1Q96MW7 591 aa12.28□□□□□ -0.44
NFKB1-212ENST00000600343 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
NFKB1-212ENST00000600343 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
NFKB1-212ENST00000600343 PDCL2Q8N4E4 241 aa12.28□□□□□ -0.44
NFKB1-212ENST00000600343 MMP14P50281 582 aa12.28□□□□□ -0.44
NFKB1-212ENST00000600343 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.44
NFKB1-212ENST00000600343 ZBTB9Q96C00 473 aa12.27□□□□□ -0.44
NFKB1-212ENST00000600343 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.44
NFKB1-212ENST00000600343 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.44
NFKB1-212ENST00000600343 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
NFKB1-212ENST00000600343 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
NFKB1-212ENST00000600343 PRIMPOLQ96LW4 560 aa12.27□□□□□ -0.45
NFKB1-212ENST00000600343 SLC52A1Q9NWF4 448 aa12.27□□□□□ -0.45
NFKB1-212ENST00000600343 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.45
NFKB1-212ENST00000600343 CHMP4CQ96CF2 233 aa12.27□□□□□ -0.45
NFKB1-212ENST00000600343 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-212ENST00000600343 HSCBQ8IWL3 235 aa12.26□□□□□ -0.45
NFKB1-212ENST00000600343 CCDC39Q9UFE4 941 aa12.26□□□□□ -0.45
NFKB1-212ENST00000600343 KIF3AQ9Y496 699 aa12.26□□□□□ -0.45
NFKB1-212ENST00000600343 PDLIM2Q96JY6 352 aa12.25□□□□□ -0.45
NFKB1-212ENST00000600343 AQRO60306 1485 aaKnown RBP eCLIP12.25□□□□□ -0.45
NFKB1-212ENST00000600343 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.45
NFKB1-212ENST00000600343 SPATA31E1Q6ZUB1 1445 aa12.25□□□□□ -0.45
NFKB1-212ENST00000600343 FAM177BA6PVY3 158 aa12.25□□□□□ -0.45
NFKB1-212ENST00000600343 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
NFKB1-212ENST00000600343 KIAA2012Q0VF49 1180 aa12.24□□□□□ -0.45
NFKB1-212ENST00000600343 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
NFKB1-212ENST00000600343 SOX12O15370 315 aa12.24□□□□□ -0.45
NFKB1-212ENST00000600343 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms