RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
NPC1-209ENST00000590723 PLSCR2Q9NRY7 297 aa15.27■□□□□ 0.04
NPC1-209ENST00000590723 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
NPC1-209ENST00000590723 MAP3K7O43318 606 aa15.25■□□□□ 0.03
NPC1-209ENST00000590723 PPP1R3GB7ZBB8 358 aa15.24■□□□□ 0.03
NPC1-209ENST00000590723 RBM33Q96EV2 1170 aaKnown RBP15.24■□□□□ 0.03
NPC1-209ENST00000590723 C6orf132Q5T0Z8 1188 aa15.23■□□□□ 0.03
NPC1-209ENST00000590723 DMRTA1Q5VZB9 504 aa15.23■□□□□ 0.03
NPC1-209ENST00000590723 ADGRD1Q6QNK2 874 aa15.23■□□□□ 0.03
NPC1-209ENST00000590723 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
NPC1-209ENST00000590723 STAC3Q96MF2 364 aa15.21■□□□□ 0.03
NPC1-209ENST00000590723 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
NPC1-209ENST00000590723 OSBPP22059 807 aa15.18■□□□□ 0.02
NPC1-209ENST00000590723 CERKQ8TCT0 537 aa15.18■□□□□ 0.02
NPC1-209ENST00000590723 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
NPC1-209ENST00000590723 SEMA3EO15041 775 aa15.16■□□□□ 0.02
NPC1-209ENST00000590723 VPS9D1Q9Y2B5 631 aa15.16■□□□□ 0.02
NPC1-209ENST00000590723 MLLT3P42568 568 aaPredicted RBP15.15■□□□□ 0.02
NPC1-209ENST00000590723 MYT1LQ9UL68 1186 aa15.15■□□□□ 0.02
NPC1-209ENST00000590723 MMRN1Q13201 1228 aa15.14■□□□□ 0.01
NPC1-209ENST00000590723 COL9A1P20849 921 aa15.12■□□□□ 0.01
NPC1-209ENST00000590723 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
NPC1-209ENST00000590723 ONECUT3O60422 494 aaPredicted RBP15.11■□□□□ 0.01
NPC1-209ENST00000590723 TSR1Q2NL82 804 aaKnown RBP15.11■□□□□ 0.01
NPC1-209ENST00000590723 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
NPC1-209ENST00000590723 TESPA1A2RU30 521 aaPredicted RBP15.1■□□□□ 0.01
NPC1-209ENST00000590723 HRO43593 1189 aa15.09■□□□□ 0.01
NPC1-209ENST00000590723 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
NPC1-209ENST00000590723 RNF166Q96A37 237 aaPredicted RBP15.08■□□□□ 0
NPC1-209ENST00000590723 RABGEF1Q9UJ41 708 aa15.08■□□□□ 0
NPC1-209ENST00000590723 PRIM1P49642 420 aaKnown RBP15.05■□□□□ -0
NPC1-209ENST00000590723 TRIM6-TRIM34B2RNG4 842 aa15.04■□□□□ -0
NPC1-209ENST00000590723 SLC24A1O60721 1099 aa15.04■□□□□ -0
NPC1-209ENST00000590723 PROX2Q3B8N5 592 aa15.04■□□□□ -0
NPC1-209ENST00000590723 MRPL50Q8N5N7 158 aaKnown RBP15.04■□□□□ -0
NPC1-209ENST00000590723 PACS2Q86VP3 889 aa15.03■□□□□ -0
NPC1-209ENST00000590723 RBM27Q9P2N5 1060 aaKnown RBP15.03■□□□□ -0
NPC1-209ENST00000590723 GOLGA8CPA6NN73 597 aa15.02■□□□□ -0
NPC1-209ENST00000590723 BHMG1C9JSJ3 638 aaPredicted RBP15.01□□□□□ -0.01
NPC1-209ENST00000590723 PRSS12P56730 875 aa15.01□□□□□ -0.01
NPC1-209ENST00000590723 CDHR5Q9HBB8 845 aa15.01□□□□□ -0.01
NPC1-209ENST00000590723 NUTM2FA1L443 756 aa15□□□□□ -0.01
NPC1-209ENST00000590723 CDCA7LQ96GN5 454 aa15□□□□□ -0.01
NPC1-209ENST00000590723 LAPTM4BQ86VI4 370 aa14.99□□□□□ -0.01
NPC1-209ENST00000590723 KIAA1468Q9P260 1216 aa14.99□□□□□ -0.01
NPC1-209ENST00000590723 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
NPC1-209ENST00000590723 FCHSD2O94868 740 aa14.94□□□□□ -0.02
NPC1-209ENST00000590723 PTGDRQ13258 359 aa14.93□□□□□ -0.02
NPC1-209ENST00000590723 NPDC1Q9NQX5 325 aaPredicted RBP14.93□□□□□ -0.02
NPC1-209ENST00000590723 TSKSQ9UJT2 592 aa14.93□□□□□ -0.02
NPC1-209ENST00000590723 RBM26Q5T8P6 1007 aaKnown RBP14.91□□□□□ -0.02
NPC1-209ENST00000590723 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
NPC1-209ENST00000590723 KCTD12Q96CX2 325 aaKnown RBP14.9□□□□□ -0.02
NPC1-209ENST00000590723 WNT2BQ93097 391 aa14.89□□□□□ -0.03
NPC1-209ENST00000590723 PADI6Q6TGC4 694 aa14.88□□□□□ -0.03
NPC1-209ENST00000590723 ANKK1Q8NFD2 765 aa14.88□□□□□ -0.03
NPC1-209ENST00000590723 HIC1Q14526 733 aa14.87□□□□□ -0.03
NPC1-209ENST00000590723 HCSTQ9UBK5 93 aa14.87□□□□□ -0.03
NPC1-209ENST00000590723 SEPT9Q9UHD8 586 aaPredicted RBP14.87□□□□□ -0.03
NPC1-209ENST00000590723 GPIHBP1Q8IV16 184 aa14.86□□□□□ -0.03
NPC1-209ENST00000590723 TATDN2Q93075 761 aa14.86□□□□□ -0.03
NPC1-209ENST00000590723 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
NPC1-209ENST00000590723 TTC13Q8NBP0 860 aa14.85□□□□□ -0.03
NPC1-209ENST00000590723 ZFRQ96KR1 1074 aaKnown RBP14.84□□□□□ -0.03
NPC1-209ENST00000590723 HDGFP51858 240 aaKnown RBP14.82□□□□□ -0.04
NPC1-209ENST00000590723 FAM198AQ9UFP1 575 aa14.82□□□□□ -0.04
NPC1-209ENST00000590723 THSD4Q6ZMP0 1018 aa14.81□□□□□ -0.04
NPC1-209ENST00000590723 NUDT18Q6ZVK8 323 aa14.81□□□□□ -0.04
NPC1-209ENST00000590723 ABCC9O60706 1549 aa14.81□□□□□ -0.04
NPC1-209ENST00000590723 GNPATO15228 680 aa14.79□□□□□ -0.04
NPC1-209ENST00000590723 RBM46Q8TBY0 533 aaKnown RBP14.78□□□□□ -0.04
NPC1-209ENST00000590723 SMAPO00193 183 aa14.77□□□□□ -0.05
NPC1-209ENST00000590723 LRCH3Q96II8 777 aa14.77□□□□□ -0.05
NPC1-209ENST00000590723 SOWAHBA6NEL2 793 aa14.76□□□□□ -0.05
NPC1-209ENST00000590723 SLC4A3P48751 1232 aa14.76□□□□□ -0.05
NPC1-209ENST00000590723 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.76□□□□□ -0.05
NPC1-209ENST00000590723 PTPN5P54829 565 aa14.75□□□□□ -0.05
NPC1-209ENST00000590723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.75□□□□□ -0.05
NPC1-209ENST00000590723 OATP04181 439 aa14.73□□□□□ -0.05
NPC1-209ENST00000590723 ADGRG1Q9Y653 693 aa14.72□□□□□ -0.05
NPC1-209ENST00000590723 GPR37O15354 613 aa14.71□□□□□ -0.05
NPC1-209ENST00000590723 LMOD2Q6P5Q4 547 aa14.71□□□□□ -0.05
NPC1-209ENST00000590723 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.05
NPC1-209ENST00000590723 NECTIN2Q92692 538 aa14.71□□□□□ -0.05
NPC1-209ENST00000590723 EYA1Q99502 592 aa14.71□□□□□ -0.05
NPC1-209ENST00000590723 BCAMP50895 628 aa14.69□□□□□ -0.06
NPC1-209ENST00000590723 SAMD7Q7Z3H4 446 aa14.69□□□□□ -0.06
NPC1-209ENST00000590723 C3orf80F5H4A9 247 aa14.68□□□□□ -0.06
NPC1-209ENST00000590723 DNAJB2P25686 324 aa14.68□□□□□ -0.06
NPC1-209ENST00000590723 BCANQ96GW7 911 aa14.68□□□□□ -0.06
NPC1-209ENST00000590723 TSR3Q9UJK0 312 aaKnown RBP14.68□□□□□ -0.06
NPC1-209ENST00000590723 SLF2Q8IX21 1173 aa14.65□□□□□ -0.06
NPC1-209ENST00000590723 HPS5Q9UPZ3 1129 aa14.65□□□□□ -0.06
NPC1-209ENST00000590723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
NPC1-209ENST00000590723 PPP4CP60510 307 aa14.64□□□□□ -0.07
NPC1-209ENST00000590723 RNF40O75150 1001 aa14.62□□□□□ -0.07
NPC1-209ENST00000590723 FECHP22830 423 aa14.62□□□□□ -0.07
NPC1-209ENST00000590723 PXYLP1Q8TE99 480 aa14.62□□□□□ -0.07
NPC1-209ENST00000590723 RCCD1A6NED2 376 aa14.61□□□□□ -0.07
NPC1-209ENST00000590723 MAP2K5Q13163 448 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms