RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 CROCC2H7BZ55 1655 aa24.23■■□□□ 1.47
CUEDC1-212ENST00000584746 PAK3O75914 559 aaPredicted RBP24.23■■□□□ 1.47
CUEDC1-212ENST00000584746 PANK3Q9H999 370 aa24.23■■□□□ 1.47
CUEDC1-212ENST00000584746 ABCA8O94911 1581 aa24.2■■□□□ 1.47
CUEDC1-212ENST00000584746 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
CUEDC1-212ENST00000584746 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
CUEDC1-212ENST00000584746 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
CUEDC1-212ENST00000584746 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
CUEDC1-212ENST00000584746 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
CUEDC1-212ENST00000584746 RALGAPBQ86X10 1494 aa24.19■■□□□ 1.46
CUEDC1-212ENST00000584746 AFAP1Q8N556 730 aa24.18■■□□□ 1.46
CUEDC1-212ENST00000584746 ARHGAP5Q13017 1502 aa24.18■■□□□ 1.46
CUEDC1-212ENST00000584746 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
CUEDC1-212ENST00000584746 FAM135AQ9P2D6 1515 aa24.16■■□□□ 1.46
CUEDC1-212ENST00000584746 FANCIQ9NVI1 1328 aa24.16■■□□□ 1.46
CUEDC1-212ENST00000584746 SAMD9LQ8IVG5 1584 aa24.15■■□□□ 1.46
CUEDC1-212ENST00000584746 ADCY10Q96PN6 1610 aa24.14■■□□□ 1.46
CUEDC1-212ENST00000584746 POLR1AO95602 1720 aaPredicted RBP24.13■■□□□ 1.45
CUEDC1-212ENST00000584746 CCDC141Q6ZP82 1450 aa24.12■■□□□ 1.45
CUEDC1-212ENST00000584746 PLA2R1Q13018 1463 aa24.11■■□□□ 1.45
CUEDC1-212ENST00000584746 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
CUEDC1-212ENST00000584746 ERICH6BQ5W0A0 696 aa24.11■■□□□ 1.45
CUEDC1-212ENST00000584746 KTN1Q86UP2 1357 aaKnown RBP24.11■■□□□ 1.45
CUEDC1-212ENST00000584746 UHRF1BP1Q6BDS2 1440 aa24.11■■□□□ 1.45
CUEDC1-212ENST00000584746 CDC42BPBQ9Y5S2 1711 aa24.09■■□□□ 1.45
CUEDC1-212ENST00000584746 PER1O15534 1290 aaPredicted RBP24.09■■□□□ 1.45
CUEDC1-212ENST00000584746 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
CUEDC1-212ENST00000584746 RALBP1Q15311 655 aa24.09■■□□□ 1.45
CUEDC1-212ENST00000584746 NLRP13Q86W25 1043 aa24.09■■□□□ 1.45
CUEDC1-212ENST00000584746 TESK2Q96S53 571 aa24.09■■□□□ 1.45
CUEDC1-212ENST00000584746 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.45
CUEDC1-212ENST00000584746 RRP1P56182 461 aaKnown RBP24.08■■□□□ 1.45
CUEDC1-212ENST00000584746 A2MP01023 1474 aa24.06■■□□□ 1.44
CUEDC1-212ENST00000584746 CCDC146Q8IYE0 955 aa24.05■■□□□ 1.44
CUEDC1-212ENST00000584746 BCL11AQ9H165 835 aa24.05■■□□□ 1.44
CUEDC1-212ENST00000584746 C20orf194Q5TEA3 1177 aa24.04■■□□□ 1.44
CUEDC1-212ENST00000584746 ADAMTS8Q9UP79 889 aa24.04■■□□□ 1.44
CUEDC1-212ENST00000584746 SHANK2Q9UPX8 1470 aa24.03■■□□□ 1.44
CUEDC1-212ENST00000584746 ARHGEF12Q9NZN5 1544 aa24.03■■□□□ 1.44
CUEDC1-212ENST00000584746 ARID4BQ4LE39 1312 aaPredicted RBP24.03■■□□□ 1.44
CUEDC1-212ENST00000584746 KDM5DQ9BY66 1539 aa24.02■■□□□ 1.44
CUEDC1-212ENST00000584746 BRD4O60885 1362 aaPredicted RBP24.02■■□□□ 1.44
CUEDC1-212ENST00000584746 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
CUEDC1-212ENST00000584746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.43
CUEDC1-212ENST00000584746 TMF1P82094 1093 aa24■■□□□ 1.43
CUEDC1-212ENST00000584746 NOP58Q9Y2X3 529 aaKnown RBP24■■□□□ 1.43
CUEDC1-212ENST00000584746 CHGAP10645 457 aaKnown RBP23.99■■□□□ 1.43
CUEDC1-212ENST00000584746 TNNT2P45379 298 aaPredicted RBP23.98■■□□□ 1.43
CUEDC1-212ENST00000584746 RNF123Q5XPI4 1314 aa23.97■■□□□ 1.43
CUEDC1-212ENST00000584746 TRAPPC8Q9Y2L5 1435 aa23.97■■□□□ 1.43
CUEDC1-212ENST00000584746 CRBNQ96SW2 442 aa23.96■■□□□ 1.43
CUEDC1-212ENST00000584746 CHD1O14646 1710 aa23.95■■□□□ 1.42
CUEDC1-212ENST00000584746 PARD3Q8TEW0 1356 aa23.95■■□□□ 1.42
CUEDC1-212ENST00000584746 ERBINQ96RT1 1412 aa23.95■■□□□ 1.42
CUEDC1-212ENST00000584746 KIF3BO15066 747 aa23.94■■□□□ 1.42
CUEDC1-212ENST00000584746 NUTM2DQ5VT03 806 aaPredicted RBP23.94■■□□□ 1.42
CUEDC1-212ENST00000584746 KNSTRNQ9Y448 316 aa23.94■■□□□ 1.42
CUEDC1-212ENST00000584746 EFCAB2Q5VUJ9 269 aa23.94■■□□□ 1.42
CUEDC1-212ENST00000584746 ANP32AP39687 249 aaKnown RBP23.93■■□□□ 1.42
CUEDC1-212ENST00000584746 SPAG9O60271 1321 aaKnown RBP23.93■■□□□ 1.42
CUEDC1-212ENST00000584746 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
CUEDC1-212ENST00000584746 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
CUEDC1-212ENST00000584746 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
CUEDC1-212ENST00000584746 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
CUEDC1-212ENST00000584746 CFAP70Q5T0N1 1121 aa23.9■■□□□ 1.42
CUEDC1-212ENST00000584746 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
CUEDC1-212ENST00000584746 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
CUEDC1-212ENST00000584746 NEUROD2Q15784 382 aa23.87■■□□□ 1.41
CUEDC1-212ENST00000584746 PPP2R1AP30153 589 aa23.86■■□□□ 1.41
CUEDC1-212ENST00000584746 ZBTB47Q9UFB7 747 aaPredicted RBP23.85■■□□□ 1.41
CUEDC1-212ENST00000584746 DEKP35659 375 aaKnown RBP23.85■■□□□ 1.41
CUEDC1-212ENST00000584746 COL17A1Q9UMD9 1497 aaPredicted RBP23.84■■□□□ 1.41
CUEDC1-212ENST00000584746 SLC4A3P48751 1232 aa23.83■■□□□ 1.41
CUEDC1-212ENST00000584746 IPO9Q96P70 1041 aaKnown RBP23.83■■□□□ 1.41
CUEDC1-212ENST00000584746 MAGI2Q86UL8 1455 aa23.83■■□□□ 1.41
CUEDC1-212ENST00000584746 PDE4AP27815 886 aa23.82■■□□□ 1.4
CUEDC1-212ENST00000584746 SPINK5Q9NQ38 1064 aaPredicted RBP23.82■■□□□ 1.4
CUEDC1-212ENST00000584746 PLEKHH1Q9ULM0 1364 aa23.81■■□□□ 1.4
CUEDC1-212ENST00000584746 MYO5CQ9NQX4 1742 aa23.81■■□□□ 1.4
CUEDC1-212ENST00000584746 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
CUEDC1-212ENST00000584746 E9PCH4 1651 aa23.79■■□□□ 1.4
CUEDC1-212ENST00000584746 APAF1O14727 1248 aa23.79■■□□□ 1.4
CUEDC1-212ENST00000584746 UGGT1Q9NYU2 1555 aa23.78■■□□□ 1.4
CUEDC1-212ENST00000584746 DMRT2Q9Y5R5 561 aa23.78■■□□□ 1.4
CUEDC1-212ENST00000584746 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
CUEDC1-212ENST00000584746 SAFB2Q14151 953 aaKnown RBP eCLIP23.78■■□□□ 1.4
CUEDC1-212ENST00000584746 AMER1Q5JTC6 1135 aaPredicted RBP23.77■■□□□ 1.4
CUEDC1-212ENST00000584746 RRP7AQ9Y3A4 280 aaKnown RBP23.77■■□□□ 1.4
CUEDC1-212ENST00000584746 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
CUEDC1-212ENST00000584746 RGS3P49796 1198 aa23.77■■□□□ 1.4
CUEDC1-212ENST00000584746 GGT6Q6P531 493 aa23.77■■□□□ 1.4
CUEDC1-212ENST00000584746 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
CUEDC1-212ENST00000584746 TRAK1Q9UPV9 953 aa23.76■■□□□ 1.39
CUEDC1-212ENST00000584746 CFAP65Q6ZU64 1925 aaKnown RBP23.76■■□□□ 1.39
CUEDC1-212ENST00000584746 PLCH2O75038 1416 aa23.75■■□□□ 1.39
CUEDC1-212ENST00000584746 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
CUEDC1-212ENST00000584746 BCAR3O75815 825 aa23.74■■□□□ 1.39
CUEDC1-212ENST00000584746 PRDM15P57071 1507 aaPredicted RBP23.73■■□□□ 1.39
CUEDC1-212ENST00000584746 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
CUEDC1-212ENST00000584746 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms