RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
CDH8-210ENST00000583483 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
CDH8-210ENST00000583483 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
CDH8-210ENST00000583483 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
CDH8-210ENST00000583483 PHF14O94880 888 aa11.28□□□□□ -0.6
CDH8-210ENST00000583483 EMP3P54852 163 aa11.28□□□□□ -0.6
CDH8-210ENST00000583483 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
CDH8-210ENST00000583483 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
CDH8-210ENST00000583483 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
CDH8-210ENST00000583483 ERBB3P21860 1342 aa11.27□□□□□ -0.61
CDH8-210ENST00000583483 PRDM2Q13029 1718 aa11.26□□□□□ -0.61
CDH8-210ENST00000583483 RBM33Q96EV2 1170 aaKnown RBP11.26□□□□□ -0.61
CDH8-210ENST00000583483 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
CDH8-210ENST00000583483 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
CDH8-210ENST00000583483 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
CDH8-210ENST00000583483 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
CDH8-210ENST00000583483 EPAS1Q99814 870 aa11.24□□□□□ -0.61
CDH8-210ENST00000583483 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
CDH8-210ENST00000583483 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
CDH8-210ENST00000583483 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
CDH8-210ENST00000583483 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
CDH8-210ENST00000583483 EN1Q05925 392 aaPredicted RBP11.21□□□□□ -0.61
CDH8-210ENST00000583483 C6orf132Q5T0Z8 1188 aa11.2□□□□□ -0.62
CDH8-210ENST00000583483 CDHR5Q9HBB8 845 aa11.2□□□□□ -0.62
CDH8-210ENST00000583483 NPDC1Q9NQX5 325 aaPredicted RBP11.2□□□□□ -0.62
CDH8-210ENST00000583483 PPP4R3BQ5MIZ7 849 aa11.19□□□□□ -0.62
CDH8-210ENST00000583483 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
CDH8-210ENST00000583483 AXIN2Q9Y2T1 843 aa11.18□□□□□ -0.62
CDH8-210ENST00000583483 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
CDH8-210ENST00000583483 GPR37O15354 613 aa11.17□□□□□ -0.62
CDH8-210ENST00000583483 COL9A1P20849 921 aa11.17□□□□□ -0.62
CDH8-210ENST00000583483 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
CDH8-210ENST00000583483 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
CDH8-210ENST00000583483 MAP3K7O43318 606 aa11.16□□□□□ -0.62
CDH8-210ENST00000583483 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
CDH8-210ENST00000583483 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
CDH8-210ENST00000583483 PSEN2P49810 448 aa11.15□□□□□ -0.62
CDH8-210ENST00000583483 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
CDH8-210ENST00000583483 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
CDH8-210ENST00000583483 POTEMA6NI47 508 aa11.12□□□□□ -0.63
CDH8-210ENST00000583483 PTGDRQ13258 359 aa11.12□□□□□ -0.63
CDH8-210ENST00000583483 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
CDH8-210ENST00000583483 KCNK17Q96T54 332 aa11.12□□□□□ -0.63
CDH8-210ENST00000583483 CFTRP13569 1480 aa11.12□□□□□ -0.63
CDH8-210ENST00000583483 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
CDH8-210ENST00000583483 FECHP22830 423 aa11.11□□□□□ -0.63
CDH8-210ENST00000583483 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
CDH8-210ENST00000583483 GPIHBP1Q8IV16 184 aa11.1□□□□□ -0.63
CDH8-210ENST00000583483 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
CDH8-210ENST00000583483 ABCC8Q09428 1581 aa11.08□□□□□ -0.64
CDH8-210ENST00000583483 PTPREP23469 700 aa11.08□□□□□ -0.64
CDH8-210ENST00000583483 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
CDH8-210ENST00000583483 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
CDH8-210ENST00000583483 ZMYND10O75800 440 aa11.07□□□□□ -0.64
CDH8-210ENST00000583483 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
CDH8-210ENST00000583483 FCHSD2O94868 740 aa11.06□□□□□ -0.64
CDH8-210ENST00000583483 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
CDH8-210ENST00000583483 KRTAP3-2Q9BYR7 98 aa11.06□□□□□ -0.64
CDH8-210ENST00000583483 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
CDH8-210ENST00000583483 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
CDH8-210ENST00000583483 LAMC3Q9Y6N6 1575 aa11.05□□□□□ -0.64
CDH8-210ENST00000583483 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
CDH8-210ENST00000583483 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
CDH8-210ENST00000583483 SYNJ1O43426 1573 aa11.03□□□□□ -0.64
CDH8-210ENST00000583483 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
CDH8-210ENST00000583483 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
CDH8-210ENST00000583483 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
CDH8-210ENST00000583483 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
CDH8-210ENST00000583483 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
CDH8-210ENST00000583483 EEA1Q15075 1411 aa11.02□□□□□ -0.64
CDH8-210ENST00000583483 PBX2P40425 430 aa11.02□□□□□ -0.65
CDH8-210ENST00000583483 PRSS12P56730 875 aa11.02□□□□□ -0.65
CDH8-210ENST00000583483 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
CDH8-210ENST00000583483 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
CDH8-210ENST00000583483 GNPATO15228 680 aa11.01□□□□□ -0.65
CDH8-210ENST00000583483 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
CDH8-210ENST00000583483 HIC1Q14526 733 aa11□□□□□ -0.65
CDH8-210ENST00000583483 PADI6Q6TGC4 694 aa11□□□□□ -0.65
CDH8-210ENST00000583483 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDH8-210ENST00000583483 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
CDH8-210ENST00000583483 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
CDH8-210ENST00000583483 ANKRD13DQ6ZTN6 518 aa10.97□□□□□ -0.65
CDH8-210ENST00000583483 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.65
CDH8-210ENST00000583483 SLC4A5Q9BY07 1137 aa10.96□□□□□ -0.65
CDH8-210ENST00000583483 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
CDH8-210ENST00000583483 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
CDH8-210ENST00000583483 IRF6O14896 467 aa10.95□□□□□ -0.66
CDH8-210ENST00000583483 CUX1P39880 1505 aa10.94□□□□□ -0.66
CDH8-210ENST00000583483 BHMG1C9JSJ3 638 aaPredicted RBP10.93□□□□□ -0.66
CDH8-210ENST00000583483 SMAPO00193 183 aa10.93□□□□□ -0.66
CDH8-210ENST00000583483 ADGRD1Q6QNK2 874 aa10.93□□□□□ -0.66
CDH8-210ENST00000583483 PHOX2BQ99453 314 aa10.93□□□□□ -0.66
CDH8-210ENST00000583483 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
CDH8-210ENST00000583483 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
CDH8-210ENST00000583483 DNMBPQ6XZF7 1577 aa10.92□□□□□ -0.66
CDH8-210ENST00000583483 HRO43593 1189 aa10.92□□□□□ -0.66
CDH8-210ENST00000583483 KRI1Q8N9T8 703 aaKnown RBP10.92□□□□□ -0.66
CDH8-210ENST00000583483 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
CDH8-210ENST00000583483 MINK1Q8N4C8 1332 aaPredicted RBP10.91□□□□□ -0.66
CDH8-210ENST00000583483 TK2O00142 265 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms