RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 DDX10Q13206 875 aaKnown RBP13.79□□□□□ -0.2
TRAPPC8-211ENST00000582539 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
TRAPPC8-211ENST00000582539 HSPA5P11021 654 aaKnown RBP13.78□□□□□ -0.2
TRAPPC8-211ENST00000582539 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
TRAPPC8-211ENST00000582539 WASHC2CQ9Y4E1 1318 aa13.78□□□□□ -0.2
TRAPPC8-211ENST00000582539 PZPP20742 1482 aa13.77□□□□□ -0.2
TRAPPC8-211ENST00000582539 ATP7AQ04656 1500 aa13.77□□□□□ -0.2
TRAPPC8-211ENST00000582539 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
TRAPPC8-211ENST00000582539 ATP10AO60312 1499 aa13.76□□□□□ -0.21
TRAPPC8-211ENST00000582539 TTC37Q6PGP7 1564 aa13.76□□□□□ -0.21
TRAPPC8-211ENST00000582539 KIF3BO15066 747 aa13.76□□□□□ -0.21
TRAPPC8-211ENST00000582539 RALBP1Q15311 655 aa13.76□□□□□ -0.21
TRAPPC8-211ENST00000582539 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
TRAPPC8-211ENST00000582539 MIER1Q8N108 512 aa13.75□□□□□ -0.21
TRAPPC8-211ENST00000582539 IQGAP3Q86VI3 1631 aa13.74□□□□□ -0.21
TRAPPC8-211ENST00000582539 CNTLNQ9NXG0 1405 aa13.74□□□□□ -0.21
TRAPPC8-211ENST00000582539 DCAF11Q8TEB1 546 aa13.74□□□□□ -0.21
TRAPPC8-211ENST00000582539 USP47Q96K76 1375 aa13.73□□□□□ -0.21
TRAPPC8-211ENST00000582539 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
TRAPPC8-211ENST00000582539 MLH3Q9UHC1 1453 aa13.73□□□□□ -0.21
TRAPPC8-211ENST00000582539 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
TRAPPC8-211ENST00000582539 A2MP01023 1474 aa13.72□□□□□ -0.21
TRAPPC8-211ENST00000582539 GLI2P10070 1586 aa13.7□□□□□ -0.22
TRAPPC8-211ENST00000582539 CCDC7Q96M83 1385 aa13.7□□□□□ -0.22
TRAPPC8-211ENST00000582539 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
TRAPPC8-211ENST00000582539 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
TRAPPC8-211ENST00000582539 POGZQ7Z3K3 1410 aa13.7□□□□□ -0.22
TRAPPC8-211ENST00000582539 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
TRAPPC8-211ENST00000582539 SLC52A1Q9NWF4 448 aa13.69□□□□□ -0.22
TRAPPC8-211ENST00000582539 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
TRAPPC8-211ENST00000582539 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC8-211ENST00000582539 KDM2AQ9Y2K7 1162 aa13.68□□□□□ -0.22
TRAPPC8-211ENST00000582539 TET3O43151 1660 aa13.67□□□□□ -0.22
TRAPPC8-211ENST00000582539 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
TRAPPC8-211ENST00000582539 NGEFQ8N5V2 710 aa13.67□□□□□ -0.22
TRAPPC8-211ENST00000582539 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
TRAPPC8-211ENST00000582539 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAPPC8-211ENST00000582539 TRAPPC8Q9Y2L5 1435 aa13.65□□□□□ -0.22
TRAPPC8-211ENST00000582539 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
TRAPPC8-211ENST00000582539 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC8-211ENST00000582539 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
TRAPPC8-211ENST00000582539 TRPM2O94759 1503 aa13.63□□□□□ -0.23
TRAPPC8-211ENST00000582539 LAMC1P11047 1609 aa13.63□□□□□ -0.23
TRAPPC8-211ENST00000582539 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
TRAPPC8-211ENST00000582539 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
TRAPPC8-211ENST00000582539 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
TRAPPC8-211ENST00000582539 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
TRAPPC8-211ENST00000582539 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
TRAPPC8-211ENST00000582539 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
TRAPPC8-211ENST00000582539 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
TRAPPC8-211ENST00000582539 GPRASP1Q5JY77 1395 aa13.61□□□□□ -0.23
TRAPPC8-211ENST00000582539 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
TRAPPC8-211ENST00000582539 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC8-211ENST00000582539 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
TRAPPC8-211ENST00000582539 PTPRTO14522 1441 aa13.59□□□□□ -0.23
TRAPPC8-211ENST00000582539 FOXD1Q16676 465 aa13.59□□□□□ -0.23
TRAPPC8-211ENST00000582539 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
TRAPPC8-211ENST00000582539 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
TRAPPC8-211ENST00000582539 GGT6Q6P531 493 aa13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 NEFMP07197 916 aa13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 MYOM2P54296 1465 aa13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 SCAF11Q99590 1463 aaKnown RBP13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 KDM5CP41229 1560 aa13.57□□□□□ -0.24
TRAPPC8-211ENST00000582539 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
TRAPPC8-211ENST00000582539 BRD4O60885 1362 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC8-211ENST00000582539 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
TRAPPC8-211ENST00000582539 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
TRAPPC8-211ENST00000582539 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
TRAPPC8-211ENST00000582539 INSRP06213 1382 aa13.55□□□□□ -0.24
TRAPPC8-211ENST00000582539 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
TRAPPC8-211ENST00000582539 KDM6BO15054 1643 aa13.55□□□□□ -0.24
TRAPPC8-211ENST00000582539 RNF17Q9BXT8 1623 aaKnown RBP13.55□□□□□ -0.24
TRAPPC8-211ENST00000582539 DEPDC5O75140 1603 aa13.54□□□□□ -0.24
TRAPPC8-211ENST00000582539 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAPPC8-211ENST00000582539 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
TRAPPC8-211ENST00000582539 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC8-211ENST00000582539 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
TRAPPC8-211ENST00000582539 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.24
TRAPPC8-211ENST00000582539 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC8-211ENST00000582539 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC8-211ENST00000582539 BCORL1Q5H9F3 1711 aa13.51□□□□□ -0.25
TRAPPC8-211ENST00000582539 SPHKAPQ2M3C7 1700 aa13.51□□□□□ -0.25
TRAPPC8-211ENST00000582539 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
TRAPPC8-211ENST00000582539 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
TRAPPC8-211ENST00000582539 AGLP35573 1532 aa13.5□□□□□ -0.25
TRAPPC8-211ENST00000582539 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
TRAPPC8-211ENST00000582539 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC8-211ENST00000582539 NBPF8Q3BBV2 869 aa13.5□□□□□ -0.25
TRAPPC8-211ENST00000582539 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
TRAPPC8-211ENST00000582539 KIF1BO60333 1816 aa13.49□□□□□ -0.25
TRAPPC8-211ENST00000582539 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
TRAPPC8-211ENST00000582539 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
TRAPPC8-211ENST00000582539 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
TRAPPC8-211ENST00000582539 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC8-211ENST00000582539 CGNL1Q0VF96 1302 aa13.47□□□□□ -0.25
TRAPPC8-211ENST00000582539 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
TRAPPC8-211ENST00000582539 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
TRAPPC8-211ENST00000582539 NPC1L1Q9UHC9 1359 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms