RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 ABCC2Q92887 1545 aa11.76□□□□□ -0.53
SKA2-203ENST00000578105 MPHOSPH9Q99550 1183 aa11.75□□□□□ -0.53
SKA2-203ENST00000578105 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
SKA2-203ENST00000578105 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
SKA2-203ENST00000578105 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
SKA2-203ENST00000578105 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
SKA2-203ENST00000578105 RPRD2Q5VT52 1461 aaKnown RBP11.73□□□□□ -0.53
SKA2-203ENST00000578105 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
SKA2-203ENST00000578105 KDM5DQ9BY66 1539 aa11.73□□□□□ -0.53
SKA2-203ENST00000578105 CHIC2Q9UKJ5 165 aa11.73□□□□□ -0.53
SKA2-203ENST00000578105 MAST1Q9Y2H9 1570 aa11.72□□□□□ -0.53
SKA2-203ENST00000578105 KDM6BO15054 1643 aa11.71□□□□□ -0.53
SKA2-203ENST00000578105 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.53
SKA2-203ENST00000578105 KDM5BQ9UGL1 1544 aa11.7□□□□□ -0.54
SKA2-203ENST00000578105 KIAA1107Q9UPP5 1409 aa11.7□□□□□ -0.54
SKA2-203ENST00000578105 ARID3CA6NKF2 412 aa11.7□□□□□ -0.54
SKA2-203ENST00000578105 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
SKA2-203ENST00000578105 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
SKA2-203ENST00000578105 CCDC141Q6ZP82 1450 aa11.7□□□□□ -0.54
SKA2-203ENST00000578105 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
SKA2-203ENST00000578105 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
SKA2-203ENST00000578105 ARAP3Q8WWN8 1544 aa11.69□□□□□ -0.54
SKA2-203ENST00000578105 ZNF644Q9H582 1327 aaPredicted RBP11.68□□□□□ -0.54
SKA2-203ENST00000578105 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
SKA2-203ENST00000578105 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
SKA2-203ENST00000578105 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
SKA2-203ENST00000578105 PZPP20742 1482 aa11.67□□□□□ -0.54
SKA2-203ENST00000578105 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
SKA2-203ENST00000578105 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
SKA2-203ENST00000578105 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
SKA2-203ENST00000578105 C7P10643 843 aa11.65□□□□□ -0.54
SKA2-203ENST00000578105 PLXNC1O60486 1568 aa11.65□□□□□ -0.54
SKA2-203ENST00000578105 SAMD9LQ8IVG5 1584 aa11.65□□□□□ -0.54
SKA2-203ENST00000578105 TEX14Q8IWB6 1497 aa11.64□□□□□ -0.55
SKA2-203ENST00000578105 CCER2I3L3R5 266 aa11.64□□□□□ -0.55
SKA2-203ENST00000578105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.64□□□□□ -0.55
SKA2-203ENST00000578105 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
SKA2-203ENST00000578105 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
SKA2-203ENST00000578105 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
SKA2-203ENST00000578105 ARHGEF12Q9NZN5 1544 aa11.62□□□□□ -0.55
SKA2-203ENST00000578105 ZCCHC11Q5TAX3 1644 aaKnown RBP11.62□□□□□ -0.55
SKA2-203ENST00000578105 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.556e-6■■■■□ 25.1
SKA2-203ENST00000578105 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
SKA2-203ENST00000578105 PLCH2O75038 1416 aa11.61□□□□□ -0.55
SKA2-203ENST00000578105 TTC37Q6PGP7 1564 aa11.61□□□□□ -0.55
SKA2-203ENST00000578105 UNC13BO14795 1591 aa11.6□□□□□ -0.55
SKA2-203ENST00000578105 ANP32CO43423 234 aa11.59□□□□□ -0.55
SKA2-203ENST00000578105 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
SKA2-203ENST00000578105 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
SKA2-203ENST00000578105 UHRF1BP1Q6BDS2 1440 aa11.59□□□□□ -0.55
SKA2-203ENST00000578105 ERBINQ96RT1 1412 aa11.59□□□□□ -0.55
SKA2-203ENST00000578105 ERCC6L2Q5T890 1561 aa11.58□□□□□ -0.55
SKA2-203ENST00000578105 POLR1AO95602 1720 aaPredicted RBP11.58□□□□□ -0.56
SKA2-203ENST00000578105 RTEL1-TNFRSF6BF6WH68 1400 aa11.58□□□□□ -0.56
SKA2-203ENST00000578105 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
SKA2-203ENST00000578105 NUP155O75694 1391 aa11.57□□□□□ -0.56
SKA2-203ENST00000578105 SYCP2Q9BX26 1530 aa11.57□□□□□ -0.56
SKA2-203ENST00000578105 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
SKA2-203ENST00000578105 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
SKA2-203ENST00000578105 EFCAB2Q5VUJ9 269 aa11.57□□□□□ -0.56
SKA2-203ENST00000578105 ASTLQ6HA08 431 aaPredicted RBP11.57□□□□□ -0.56
SKA2-203ENST00000578105 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
SKA2-203ENST00000578105 ABCC1P33527 1531 aa11.56□□□□□ -0.56
SKA2-203ENST00000578105 GTF3C3Q9Y5Q9 886 aa11.56□□□□□ -0.56
SKA2-203ENST00000578105 MAGI2Q86UL8 1455 aa11.56□□□□□ -0.56
SKA2-203ENST00000578105 WDR7Q9Y4E6 1490 aa11.56□□□□□ -0.56
SKA2-203ENST00000578105 PKD2Q13563 968 aa11.55□□□□□ -0.56
SKA2-203ENST00000578105 IQGAP3Q86VI3 1631 aa11.55□□□□□ -0.56
SKA2-203ENST00000578105 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
SKA2-203ENST00000578105 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
SKA2-203ENST00000578105 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.56
SKA2-203ENST00000578105 YTHDC1Q96MU7 727 aaKnown RBP11.54□□□□□ -0.56
SKA2-203ENST00000578105 ATP10AO60312 1499 aa11.54□□□□□ -0.56
SKA2-203ENST00000578105 SPATA31E1Q6ZUB1 1445 aa11.53□□□□□ -0.56
SKA2-203ENST00000578105 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
SKA2-203ENST00000578105 RALGAPBQ86X10 1494 aa11.52□□□□□ -0.56
SKA2-203ENST00000578105 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
SKA2-203ENST00000578105 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
SKA2-203ENST00000578105 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
SKA2-203ENST00000578105 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
SKA2-203ENST00000578105 CCDC7Q96M83 1385 aa11.49□□□□□ -0.57
SKA2-203ENST00000578105 CCDC144AA2RUR9 1427 aa11.48□□□□□ -0.57
SKA2-203ENST00000578105 CFAP74Q9C0B2 1584 aa11.48□□□□□ -0.57
SKA2-203ENST00000578105 LAMC1P11047 1609 aa11.48□□□□□ -0.57
SKA2-203ENST00000578105 EIF2AK4Q9P2K8 1649 aaKnown RBP11.47□□□□□ -0.57
SKA2-203ENST00000578105 WASHC2AQ641Q2 1341 aa11.47□□□□□ -0.57
SKA2-203ENST00000578105 NBPF8Q3BBV2 869 aa11.47□□□□□ -0.57
SKA2-203ENST00000578105 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
SKA2-203ENST00000578105 KDM5CP41229 1560 aa11.46□□□□□ -0.57
SKA2-203ENST00000578105 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
SKA2-203ENST00000578105 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
SKA2-203ENST00000578105 DEPDC5O75140 1603 aa11.45□□□□□ -0.58
SKA2-203ENST00000578105 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
SKA2-203ENST00000578105 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
SKA2-203ENST00000578105 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
SKA2-203ENST00000578105 FANCAO15360 1455 aa11.44□□□□□ -0.58
SKA2-203ENST00000578105 USP47Q96K76 1375 aa11.43□□□□□ -0.58
SKA2-203ENST00000578105 KTN1Q86UP2 1357 aaKnown RBP11.42□□□□□ -0.58
SKA2-203ENST00000578105 ATP7AQ04656 1500 aa11.42□□□□□ -0.58
SKA2-203ENST00000578105 ST18O60284 1047 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms