RNA–Protein interactions for RNA: ENST00000572102.5

TVP23A-204, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 5

Gene TVP23A, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-204ENST00000572102 CCER2I3L3R5 266 aa13.63□□□□□ -0.23
TVP23A-204ENST00000572102 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
TVP23A-204ENST00000572102 RBM10P98175 930 aaKnown RBP13.63□□□□□ -0.23
TVP23A-204ENST00000572102 NUP155O75694 1391 aa13.62□□□□□ -0.23
TVP23A-204ENST00000572102 SENP3-EIF4A1A0A087X0R7 540 aa13.61□□□□□ -0.23
TVP23A-204ENST00000572102 UHRF1BP1LA0JNW5 1464 aa13.61□□□□□ -0.23
TVP23A-204ENST00000572102 ANKRD30AQ9BXX3 1397 aa13.6□□□□□ -0.23
TVP23A-204ENST00000572102 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
TVP23A-204ENST00000572102 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
TVP23A-204ENST00000572102 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
TVP23A-204ENST00000572102 ANKRD50Q9ULJ7 1429 aa13.59□□□□□ -0.23
TVP23A-204ENST00000572102 PZPP20742 1482 aa13.58□□□□□ -0.24
TVP23A-204ENST00000572102 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
TVP23A-204ENST00000572102 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
TVP23A-204ENST00000572102 C9orf84Q5VXU9 1444 aa13.57□□□□□ -0.24
TVP23A-204ENST00000572102 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
TVP23A-204ENST00000572102 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
TVP23A-204ENST00000572102 ABCC10Q5T3U5 1492 aa13.56□□□□□ -0.24
TVP23A-204ENST00000572102 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
TVP23A-204ENST00000572102 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
TVP23A-204ENST00000572102 KIF15Q9NS87 1388 aa13.55□□□□□ -0.24
TVP23A-204ENST00000572102 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
TVP23A-204ENST00000572102 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
TVP23A-204ENST00000572102 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
TVP23A-204ENST00000572102 NAP1L5Q96NT1 182 aaPredicted RBP13.54□□□□□ -0.24
TVP23A-204ENST00000572102 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
TVP23A-204ENST00000572102 DCAF11Q8TEB1 546 aa13.53□□□□□ -0.24
TVP23A-204ENST00000572102 FKBP8Q14318 412 aa13.53□□□□□ -0.24
TVP23A-204ENST00000572102 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.24
TVP23A-204ENST00000572102 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
TVP23A-204ENST00000572102 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
TVP23A-204ENST00000572102 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
TVP23A-204ENST00000572102 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
TVP23A-204ENST00000572102 ADGRL2O95490 1459 aa13.5□□□□□ -0.25
TVP23A-204ENST00000572102 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
TVP23A-204ENST00000572102 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
TVP23A-204ENST00000572102 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
TVP23A-204ENST00000572102 ARHGAP5Q13017 1502 aa13.48□□□□□ -0.25
TVP23A-204ENST00000572102 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
TVP23A-204ENST00000572102 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
TVP23A-204ENST00000572102 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
TVP23A-204ENST00000572102 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
TVP23A-204ENST00000572102 TTC37Q6PGP7 1564 aa13.47□□□□□ -0.25
TVP23A-204ENST00000572102 SYCP2Q9BX26 1530 aa13.46□□□□□ -0.25
TVP23A-204ENST00000572102 ZBTB22O15209 634 aa13.46□□□□□ -0.25
TVP23A-204ENST00000572102 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
TVP23A-204ENST00000572102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.26
TVP23A-204ENST00000572102 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
TVP23A-204ENST00000572102 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-204ENST00000572102 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
TVP23A-204ENST00000572102 WDR7Q9Y4E6 1490 aa13.45□□□□□ -0.26
TVP23A-204ENST00000572102 USP47Q96K76 1375 aa13.44□□□□□ -0.26
TVP23A-204ENST00000572102 CROCC2H7BZ55 1655 aa13.44□□□□□ -0.26
TVP23A-204ENST00000572102 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
TVP23A-204ENST00000572102 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
TVP23A-204ENST00000572102 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
TVP23A-204ENST00000572102 PRDM10Q9NQV6 1147 aa13.44□□□□□ -0.26
TVP23A-204ENST00000572102 SHANK2Q9UPX8 1470 aa13.43□□□□□ -0.26
TVP23A-204ENST00000572102 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
TVP23A-204ENST00000572102 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
TVP23A-204ENST00000572102 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
TVP23A-204ENST00000572102 ZMYND15Q9H091 742 aa13.42□□□□□ -0.26
TVP23A-204ENST00000572102 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
TVP23A-204ENST00000572102 CNTLNQ9NXG0 1405 aa13.42□□□□□ -0.26
TVP23A-204ENST00000572102 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
TVP23A-204ENST00000572102 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
TVP23A-204ENST00000572102 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
TVP23A-204ENST00000572102 ZFP91Q96JP5 570 aaPredicted RBP13.41□□□□□ -0.26
TVP23A-204ENST00000572102 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
TVP23A-204ENST00000572102 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
TVP23A-204ENST00000572102 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
TVP23A-204ENST00000572102 ARID3AQ99856 593 aa13.38□□□□□ -0.27
TVP23A-204ENST00000572102 MYO5CQ9NQX4 1742 aa13.38□□□□□ -0.27
TVP23A-204ENST00000572102 TRAPPC8Q9Y2L5 1435 aa13.38□□□□□ -0.27
TVP23A-204ENST00000572102 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
TVP23A-204ENST00000572102 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
TVP23A-204ENST00000572102 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
TVP23A-204ENST00000572102 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
TVP23A-204ENST00000572102 FAM135AQ9P2D6 1515 aa13.35□□□□□ -0.27
TVP23A-204ENST00000572102 CCDC144AA2RUR9 1427 aa13.35□□□□□ -0.27
TVP23A-204ENST00000572102 KDM5DQ9BY66 1539 aa13.35□□□□□ -0.27
TVP23A-204ENST00000572102 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
TVP23A-204ENST00000572102 SPAG9O60271 1321 aaKnown RBP13.35□□□□□ -0.27
TVP23A-204ENST00000572102 SENP3Q9H4L4 574 aaPredicted RBP13.34□□□□□ -0.27
TVP23A-204ENST00000572102 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
TVP23A-204ENST00000572102 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
TVP23A-204ENST00000572102 PLCH2O75038 1416 aa13.33□□□□□ -0.28
TVP23A-204ENST00000572102 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
TVP23A-204ENST00000572102 PLA2R1Q13018 1463 aa13.32□□□□□ -0.28
TVP23A-204ENST00000572102 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
TVP23A-204ENST00000572102 POLR1AO95602 1720 aaPredicted RBP13.32□□□□□ -0.28
TVP23A-204ENST00000572102 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
TVP23A-204ENST00000572102 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
TVP23A-204ENST00000572102 KIF3BO15066 747 aa13.31□□□□□ -0.28
TVP23A-204ENST00000572102 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
TVP23A-204ENST00000572102 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
TVP23A-204ENST00000572102 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
TVP23A-204ENST00000572102 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
TVP23A-204ENST00000572102 ARAP3Q8WWN8 1544 aa13.28□□□□□ -0.28
TVP23A-204ENST00000572102 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms