RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 MPHOSPH9Q99550 1183 aa8.12□□□□□ -1.11
CDH13-213ENST00000569454 MAST1Q9Y2H9 1570 aa8.12□□□□□ -1.11
CDH13-213ENST00000569454 ANKRD50Q9ULJ7 1429 aa8.12□□□□□ -1.11
CDH13-213ENST00000569454 ANKRD30BQ9BXX2 1392 aa8.11□□□□□ -1.11
CDH13-213ENST00000569454 PITPNM1O00562 1244 aa8.11□□□□□ -1.11
CDH13-213ENST00000569454 PZPP20742 1482 aa8.11□□□□□ -1.11
CDH13-213ENST00000569454 ARAP3Q8WWN8 1544 aa8.1□□□□□ -1.11
CDH13-213ENST00000569454 TEX14Q8IWB6 1497 aa8.1□□□□□ -1.11
CDH13-213ENST00000569454 KIAA1107Q9UPP5 1409 aa8.1□□□□□ -1.11
CDH13-213ENST00000569454 MYO5CQ9NQX4 1742 aa8.09□□□□□ -1.11
CDH13-213ENST00000569454 ZNF644Q9H582 1327 aaPredicted RBP8.09□□□□□ -1.11
CDH13-213ENST00000569454 MBD5Q9P267 1494 aa8.09□□□□□ -1.11
CDH13-213ENST00000569454 TSPY4P0CV99 314 aa8.09□□□□□ -1.11
CDH13-213ENST00000569454 TSPY10P0CW01 314 aa8.09□□□□□ -1.11
CDH13-213ENST00000569454 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
CDH13-213ENST00000569454 MED1Q15648 1581 aaPredicted RBP8.09□□□□□ -1.11
CDH13-213ENST00000569454 SAMD9LQ8IVG5 1584 aa8.09□□□□□ -1.11
CDH13-213ENST00000569454 ARHGEF12Q9NZN5 1544 aa8.08□□□□□ -1.12
CDH13-213ENST00000569454 EVX2Q03828 476 aa8.08□□□□□ -1.12
CDH13-213ENST00000569454 SLC4A1APQ9BWU0 796 aaKnown RBP8.08□□□□□ -1.12
CDH13-213ENST00000569454 KIF15Q9NS87 1388 aa8.08□□□□□ -1.12
CDH13-213ENST00000569454 ARHGAP5Q13017 1502 aa8.08□□□□□ -1.12
CDH13-213ENST00000569454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDH13-213ENST00000569454 CDC42BPBQ9Y5S2 1711 aa8.07□□□□□ -1.12
CDH13-213ENST00000569454 TTC37Q6PGP7 1564 aa8.07□□□□□ -1.12
CDH13-213ENST00000569454 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
CDH13-213ENST00000569454 ZCCHC11Q5TAX3 1644 aaKnown RBP8.07□□□□□ -1.12
CDH13-213ENST00000569454 UNC13BO14795 1591 aa8.05□□□□□ -1.12
CDH13-213ENST00000569454 SYCP2Q9BX26 1530 aa8.05□□□□□ -1.12
CDH13-213ENST00000569454 CCER2I3L3R5 266 aa8.05□□□□□ -1.12
CDH13-213ENST00000569454 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDH13-213ENST00000569454 PLCH2O75038 1416 aa8.04□□□□□ -1.12
CDH13-213ENST00000569454 ERBINQ96RT1 1412 aa8.04□□□□□ -1.12
CDH13-213ENST00000569454 ABCC1P33527 1531 aa8.03□□□□□ -1.12
CDH13-213ENST00000569454 DUOX2Q9NRD8 1548 aa8.03□□□□□ -1.12
CDH13-213ENST00000569454 MAGI2Q86UL8 1455 aa8.03□□□□□ -1.12
CDH13-213ENST00000569454 NUP155O75694 1391 aa8.03□□□□□ -1.12
CDH13-213ENST00000569454 ANP32CO43423 234 aa8.03□□□□□ -1.12
CDH13-213ENST00000569454 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
CDH13-213ENST00000569454 UHRF1BP1Q6BDS2 1440 aa8.03□□□□□ -1.12
CDH13-213ENST00000569454 WDR7Q9Y4E6 1490 aa8.02□□□□□ -1.13
CDH13-213ENST00000569454 KIF13AQ9H1H9 1805 aa8.02□□□□□ -1.13
CDH13-213ENST00000569454 LHX8Q68G74 356 aa8.02□□□□□ -1.13
CDH13-213ENST00000569454 PELP1Q8IZL8 1130 aaKnown RBP8.02□□□□□ -1.13
CDH13-213ENST00000569454 L3MBTL2Q969R5 705 aa8.02□□□□□ -1.13
CDH13-213ENST00000569454 POLR1AO95602 1720 aaPredicted RBP8.02□□□□□ -1.13
CDH13-213ENST00000569454 FAM135AQ9P2D6 1515 aa8.02□□□□□ -1.13
CDH13-213ENST00000569454 RTEL1-TNFRSF6BF6WH68 1400 aa8.02□□□□□ -1.13
CDH13-213ENST00000569454 RALGAPBQ86X10 1494 aa8.01□□□□□ -1.13
CDH13-213ENST00000569454 IQGAP3Q86VI3 1631 aa8.01□□□□□ -1.13
CDH13-213ENST00000569454 DDX10Q13206 875 aaKnown RBP8.01□□□□□ -1.13
CDH13-213ENST00000569454 EFCAB2Q5VUJ9 269 aa8.01□□□□□ -1.13
CDH13-213ENST00000569454 GTF3C3Q9Y5Q9 886 aa8.01□□□□□ -1.13
CDH13-213ENST00000569454 ARID4BQ4LE39 1312 aaPredicted RBP8.01□□□□□ -1.13
CDH13-213ENST00000569454 PKD2Q13563 968 aa8□□□□□ -1.13
CDH13-213ENST00000569454 CNTLNQ9NXG0 1405 aa8□□□□□ -1.13
CDH13-213ENST00000569454 ATP10AO60312 1499 aa8□□□□□ -1.13
CDH13-213ENST00000569454 ABCA9Q8IUA7 1624 aa8□□□□□ -1.13
CDH13-213ENST00000569454 HNRNPMP52272 730 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH13-213ENST00000569454 SPATA31E1Q6ZUB1 1445 aa7.99□□□□□ -1.13
CDH13-213ENST00000569454 HSPA5P11021 654 aaKnown RBP7.98□□□□□ -1.13
CDH13-213ENST00000569454 CCDC7Q96M83 1385 aa7.97□□□□□ -1.13
CDH13-213ENST00000569454 CFAP74Q9C0B2 1584 aa7.97□□□□□ -1.13
CDH13-213ENST00000569454 CCDC144AA2RUR9 1427 aa7.97□□□□□ -1.13
CDH13-213ENST00000569454 EIF2AK4Q9P2K8 1649 aaKnown RBP7.97□□□□□ -1.13
CDH13-213ENST00000569454 ZFYVE16Q7Z3T8 1539 aa7.97□□□□□ -1.13
CDH13-213ENST00000569454 ROCK2O75116 1388 aaKnown RBP7.97□□□□□ -1.13
CDH13-213ENST00000569454 C19orf67A6NJJ6 358 aa7.96□□□□□ -1.14
CDH13-213ENST00000569454 WASHC2AQ641Q2 1341 aa7.96□□□□□ -1.14
CDH13-213ENST00000569454 KDM5CP41229 1560 aa7.96□□□□□ -1.14
CDH13-213ENST00000569454 INO80Q9ULG1 1556 aaPredicted RBP7.96□□□□□ -1.14
CDH13-213ENST00000569454 LAMC1P11047 1609 aa7.96□□□□□ -1.14
CDH13-213ENST00000569454 FAM69CQ0P6D2 419 aa7.95□□□□□ -1.14
CDH13-213ENST00000569454 DEPDC5O75140 1603 aa7.95□□□□□ -1.14
CDH13-213ENST00000569454 USP47Q96K76 1375 aa7.95□□□□□ -1.14
CDH13-213ENST00000569454 FANCAO15360 1455 aa7.94□□□□□ -1.14
CDH13-213ENST00000569454 ATP7AQ04656 1500 aa7.93□□□□□ -1.14
CDH13-213ENST00000569454 NEURL4Q96JN8 1562 aa7.93□□□□□ -1.14
CDH13-213ENST00000569454 GABBR2O75899 941 aa7.93□□□□□ -1.14
CDH13-213ENST00000569454 NBPF8Q3BBV2 869 aa7.93□□□□□ -1.14
CDH13-213ENST00000569454 STAC3Q96MF2 364 aa7.93□□□□□ -1.14
CDH13-213ENST00000569454 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
CDH13-213ENST00000569454 KCNH8Q96L42 1107 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 ATF5Q9Y2D1 282 aaPredicted RBP7.92□□□□□ -1.14
CDH13-213ENST00000569454 KANK1Q14678 1352 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 GPRASP1Q5JY77 1395 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 ASXL2Q76L83 1435 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 PRAG1Q86YV5 1406 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 TRAPPC8Q9Y2L5 1435 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 ZNF518AQ6AHZ1 1483 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 TRPM2O94759 1503 aa7.92□□□□□ -1.14
CDH13-213ENST00000569454 PRDM15P57071 1507 aaPredicted RBP7.92□□□□□ -1.14
CDH13-213ENST00000569454 PRKAR2AP13861 404 aaKnown RBP7.91□□□□□ -1.14
CDH13-213ENST00000569454 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
CDH13-213ENST00000569454 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
CDH13-213ENST00000569454 VWDEQ8N2E2 1590 aa7.91□□□□□ -1.14
CDH13-213ENST00000569454 TET3O43151 1660 aa7.91□□□□□ -1.14
CDH13-213ENST00000569454 TRPM1Q7Z4N2 1603 aa7.9□□□□□ -1.14
CDH13-213ENST00000569454 KIF7Q2M1P5 1343 aa7.9□□□□□ -1.14
CDH13-213ENST00000569454 NPM1P06748 294 aaKnown RBP eCLIP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms