RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 VPS9D1Q9Y2B5 631 aa16■□□□□ 0.15
CCP110-208ENST00000566523 ZBED2Q9BTP6 218 aa15.99■□□□□ 0.15
CCP110-208ENST00000566523 KCNV2Q8TDN2 545 aa15.97■□□□□ 0.15
CCP110-208ENST00000566523 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
CCP110-208ENST00000566523 PPP1R3GB7ZBB8 358 aa15.94■□□□□ 0.14
CCP110-208ENST00000566523 COL9A1P20849 921 aa15.94■□□□□ 0.14
CCP110-208ENST00000566523 NBR1Q14596 966 aa15.93■□□□□ 0.14
CCP110-208ENST00000566523 C6orf132Q5T0Z8 1188 aa15.93■□□□□ 0.14
CCP110-208ENST00000566523 EN1Q05925 392 aaPredicted RBP15.91■□□□□ 0.14
CCP110-208ENST00000566523 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
CCP110-208ENST00000566523 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
CCP110-208ENST00000566523 BHMG1C9JSJ3 638 aaPredicted RBP15.89■□□□□ 0.13
CCP110-208ENST00000566523 GRXCR2A6NFK2 248 aa15.88■□□□□ 0.13
CCP110-208ENST00000566523 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
CCP110-208ENST00000566523 OSBPP22059 807 aa15.85■□□□□ 0.13
CCP110-208ENST00000566523 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
CCP110-208ENST00000566523 MAP3K7O43318 606 aa15.84■□□□□ 0.13
CCP110-208ENST00000566523 PROX2Q3B8N5 592 aa15.84■□□□□ 0.13
CCP110-208ENST00000566523 TSR1Q2NL82 804 aaKnown RBP15.83■□□□□ 0.12
CCP110-208ENST00000566523 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
CCP110-208ENST00000566523 RABGEF1Q9UJ41 708 aa15.8■□□□□ 0.12
CCP110-208ENST00000566523 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
CCP110-208ENST00000566523 ONECUT3O60422 494 aaPredicted RBP15.78■□□□□ 0.12
CCP110-208ENST00000566523 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.12
CCP110-208ENST00000566523 MRPL50Q8N5N7 158 aaKnown RBP15.76■□□□□ 0.11
CCP110-208ENST00000566523 NBPF3Q9H094 633 aa15.76■□□□□ 0.11
CCP110-208ENST00000566523 KCTD12Q96CX2 325 aaKnown RBP15.75■□□□□ 0.11
CCP110-208ENST00000566523 TRIM6-TRIM34B2RNG4 842 aa15.74■□□□□ 0.11
CCP110-208ENST00000566523 KIAA1468Q9P260 1216 aa15.74■□□□□ 0.11
CCP110-208ENST00000566523 CDHR5Q9HBB8 845 aa15.71■□□□□ 0.11
CCP110-208ENST00000566523 HCSTQ9UBK5 93 aa15.71■□□□□ 0.11
CCP110-208ENST00000566523 CERKQ8TCT0 537 aa15.7■□□□□ 0.1
CCP110-208ENST00000566523 TSKSQ9UJT2 592 aa15.69■□□□□ 0.1
CCP110-208ENST00000566523 VSIG10Q8N0Z9 540 aa15.68■□□□□ 0.1
CCP110-208ENST00000566523 SEMA3EO15041 775 aa15.67■□□□□ 0.1
CCP110-208ENST00000566523 LAPTM4BQ86VI4 370 aa15.67■□□□□ 0.1
CCP110-208ENST00000566523 GOLGA8CPA6NN73 597 aa15.66■□□□□ 0.1
CCP110-208ENST00000566523 PRSS12P56730 875 aa15.66■□□□□ 0.1
CCP110-208ENST00000566523 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
CCP110-208ENST00000566523 WNT2BQ93097 391 aa15.65■□□□□ 0.1
CCP110-208ENST00000566523 NPDC1Q9NQX5 325 aaPredicted RBP15.65■□□□□ 0.1
CCP110-208ENST00000566523 THSD4Q6ZMP0 1018 aa15.64■□□□□ 0.09
CCP110-208ENST00000566523 FAM198AQ9UFP1 575 aa15.64■□□□□ 0.09
CCP110-208ENST00000566523 PACS2Q86VP3 889 aa15.62■□□□□ 0.09
CCP110-208ENST00000566523 SEPT9Q9UHD8 586 aaPredicted RBP15.62■□□□□ 0.09
CCP110-208ENST00000566523 RBM27Q9P2N5 1060 aaKnown RBP15.6■□□□□ 0.09
CCP110-208ENST00000566523 ZFRQ96KR1 1074 aaKnown RBP15.59■□□□□ 0.09
CCP110-208ENST00000566523 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
CCP110-208ENST00000566523 PTPN5P54829 565 aa15.58■□□□□ 0.08
CCP110-208ENST00000566523 FAM98CQ17RN3 349 aaKnown RBP15.58■□□□□ 0.08
CCP110-208ENST00000566523 C3orf80F5H4A9 247 aa15.56■□□□□ 0.08
CCP110-208ENST00000566523 TTC13Q8NBP0 860 aa15.56■□□□□ 0.08
CCP110-208ENST00000566523 ANKK1Q8NFD2 765 aa15.56■□□□□ 0.08
CCP110-208ENST00000566523 SOWAHBA6NEL2 793 aa15.52■□□□□ 0.08
CCP110-208ENST00000566523 PTGDRQ13258 359 aa15.52■□□□□ 0.08
CCP110-208ENST00000566523 PADI6Q6TGC4 694 aa15.52■□□□□ 0.08
CCP110-208ENST00000566523 TATDN2Q93075 761 aa15.52■□□□□ 0.08
CCP110-208ENST00000566523 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
CCP110-208ENST00000566523 SMAPO00193 183 aa15.51■□□□□ 0.07
CCP110-208ENST00000566523 BCAMP50895 628 aa15.5■□□□□ 0.07
CCP110-208ENST00000566523 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
CCP110-208ENST00000566523 NUTM2FA1L443 756 aa15.47■□□□□ 0.07
CCP110-208ENST00000566523 NUDT18Q6ZVK8 323 aa15.47■□□□□ 0.07
CCP110-208ENST00000566523 SMYD5Q6GMV2 418 aa15.46■□□□□ 0.07
CCP110-208ENST00000566523 PLA2G2EQ9NZK7 142 aa15.45■□□□□ 0.06
CCP110-208ENST00000566523 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
CCP110-208ENST00000566523 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.44■□□□□ 0.06
CCP110-208ENST00000566523 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
CCP110-208ENST00000566523 FCHSD2O94868 740 aa15.41■□□□□ 0.06
CCP110-208ENST00000566523 SAMD7Q7Z3H4 446 aa15.4■□□□□ 0.06
CCP110-208ENST00000566523 WBP1LQ9NX94 342 aa15.4■□□□□ 0.06
CCP110-208ENST00000566523 EYA1Q99502 592 aa15.39■□□□□ 0.05
CCP110-208ENST00000566523 TSR3Q9UJK0 312 aaKnown RBP15.38■□□□□ 0.05
CCP110-208ENST00000566523 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
CCP110-208ENST00000566523 NYAP1Q6ZVC0 841 aa15.36■□□□□ 0.05
CCP110-208ENST00000566523 GPR37O15354 613 aa15.33■□□□□ 0.04
CCP110-208ENST00000566523 ADGRG1Q9Y653 693 aa15.33■□□□□ 0.04
CCP110-208ENST00000566523 HIC1Q14526 733 aa15.32■□□□□ 0.04
CCP110-208ENST00000566523 IFFO2Q5TF58 517 aa15.3■□□□□ 0.04
CCP110-208ENST00000566523 HDGFP51858 240 aaKnown RBP15.29■□□□□ 0.04
CCP110-208ENST00000566523 PPP4CP60510 307 aa15.29■□□□□ 0.04
CCP110-208ENST00000566523 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
CCP110-208ENST00000566523 SWT1Q5T5J6 900 aaKnown RBP15.29■□□□□ 0.04
CCP110-208ENST00000566523 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
CCP110-208ENST00000566523 ITGBL1O95965 494 aaPredicted RBP15.26■□□□□ 0.03
CCP110-208ENST00000566523 FECHP22830 423 aa15.26■□□□□ 0.03
CCP110-208ENST00000566523 GNPATO15228 680 aa15.25■□□□□ 0.03
CCP110-208ENST00000566523 DNAJB2P25686 324 aa15.24■□□□□ 0.03
CCP110-208ENST00000566523 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
CCP110-208ENST00000566523 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
CCP110-208ENST00000566523 RCCD1A6NED2 376 aa15.21■□□□□ 0.03
CCP110-208ENST00000566523 RNF40O75150 1001 aa15.21■□□□□ 0.03
CCP110-208ENST00000566523 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
CCP110-208ENST00000566523 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
CCP110-208ENST00000566523 OATP04181 439 aa15.19■□□□□ 0.02
CCP110-208ENST00000566523 TULP1O00294 542 aaPredicted RBP15.17■□□□□ 0.02
CCP110-208ENST00000566523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
CCP110-208ENST00000566523 APLP1P51693 650 aa15.16■□□□□ 0.02
CCP110-208ENST00000566523 METTL3Q86U44 580 aaKnown RBP15.16■□□□□ 0.02
CCP110-208ENST00000566523 NECTIN2Q92692 538 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms