RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 AEBP2Q6ZN18 517 aaPredicted RBP37.8■■■■□ 3.64
CCP110-208ENST00000566523 CHIC1Q5VXU3 224 aa36.42■■■■□ 3.42
CCP110-208ENST00000566523 SENP3Q9H4L4 574 aaPredicted RBP32.1■■■□□ 2.73
CCP110-208ENST00000566523 PHF23Q9BUL5 403 aaPredicted RBP32■■■□□ 2.71
CCP110-208ENST00000566523 FOXD1Q16676 465 aa29.89■■■□□ 2.38
CCP110-208ENST00000566523 PLPPR3Q6T4P5 718 aa29.33■■■□□ 2.29
CCP110-208ENST00000566523 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.14
CCP110-208ENST00000566523 ADRA2BP18089 450 aa28.3■■■□□ 2.12
CCP110-208ENST00000566523 PIAS4Q8N2W9 510 aaPredicted RBP28.01■■■□□ 2.07
CCP110-208ENST00000566523 MSH5O43196 834 aa27.71■■■□□ 2.03
CCP110-208ENST00000566523 POTEDQ86YR6 584 aa26.13■■□□□ 1.77
CCP110-208ENST00000566523 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
CCP110-208ENST00000566523 MAPK8IP2Q13387 824 aaPredicted RBP25.84■■□□□ 1.73
CCP110-208ENST00000566523 PPP4R3CPQ6ZMV5 832 aa25.79■■□□□ 1.72
CCP110-208ENST00000566523 DMRT2Q9Y5R5 561 aa25.57■■□□□ 1.68
CCP110-208ENST00000566523 CNKSR2Q8WXI2 1034 aa25.18■■□□□ 1.62
CCP110-208ENST00000566523 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
CCP110-208ENST00000566523 HOXD11P31277 338 aaPredicted RBP24.87■■□□□ 1.57
CCP110-208ENST00000566523 RNF216Q9NWF9 866 aaPredicted RBP24.81■■□□□ 1.56
CCP110-208ENST00000566523 KCNA4P22459 653 aa24.64■■□□□ 1.54
CCP110-208ENST00000566523 NPM3O75607 178 aaKnown RBP24.61■■□□□ 1.53
CCP110-208ENST00000566523 DCAF8L1A6NGE4 600 aa24.4■■□□□ 1.5
CCP110-208ENST00000566523 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
CCP110-208ENST00000566523 RNF39Q9H2S5 420 aa23.73■■□□□ 1.39
CCP110-208ENST00000566523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.37
CCP110-208ENST00000566523 CACNB1Q02641 598 aaPredicted RBP23.42■■□□□ 1.34
CCP110-208ENST00000566523 C1QBPQ07021 282 aaKnown RBP23.4■■□□□ 1.34
CCP110-208ENST00000566523 SLC4A2P04920 1241 aa23.39■■□□□ 1.33
CCP110-208ENST00000566523 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
CCP110-208ENST00000566523 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
CCP110-208ENST00000566523 FOXD4L1Q9NU39 408 aa22.8■■□□□ 1.24
CCP110-208ENST00000566523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
CCP110-208ENST00000566523 MYCNP04198 464 aaPredicted RBP22.73■■□□□ 1.23
CCP110-208ENST00000566523 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
CCP110-208ENST00000566523 SPINK5Q9NQ38 1064 aaPredicted RBP22.73■■□□□ 1.23
CCP110-208ENST00000566523 ZBTB22O15209 634 aa22.69■■□□□ 1.22
CCP110-208ENST00000566523 SAMD1Q6SPF0 538 aaPredicted RBP22.64■■□□□ 1.21
CCP110-208ENST00000566523 CAPN15O75808 1086 aa22.62■■□□□ 1.21
CCP110-208ENST00000566523 APLP2Q06481 763 aa22.6■■□□□ 1.21
CCP110-208ENST00000566523 DSG3P32926 999 aa22.41■■□□□ 1.18
CCP110-208ENST00000566523 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
CCP110-208ENST00000566523 ZNF219Q9P2Y4 722 aaPredicted RBP22.39■■□□□ 1.17
CCP110-208ENST00000566523 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
CCP110-208ENST00000566523 ABCB7O75027 752 aa22.16■■□□□ 1.14
CCP110-208ENST00000566523 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
CCP110-208ENST00000566523 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
CCP110-208ENST00000566523 ATXN8OSP0DMR3 200 aa22.07■■□□□ 1.12
CCP110-208ENST00000566523 POLA2Q14181 598 aa21.95■■□□□ 1.1
CCP110-208ENST00000566523 ZBTB12Q9Y330 459 aaPredicted RBP21.52■■□□□ 1.04
CCP110-208ENST00000566523 RBM42Q9BTD8 480 aaKnown RBP21.33■■□□□ 1.01
CCP110-208ENST00000566523 FBLN2P98095 1184 aa21.23■□□□□ 0.99
CCP110-208ENST00000566523 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
CCP110-208ENST00000566523 MKRN4PQ13434 485 aaPredicted RBP21.21■□□□□ 0.99
CCP110-208ENST00000566523 AKT1S1Q96B36 256 aa20.98■□□□□ 0.95
CCP110-208ENST00000566523 SPDYE2BA6NHP3 402 aa20.93■□□□□ 0.94
CCP110-208ENST00000566523 SPDYE6P0CI01 402 aa20.93■□□□□ 0.94
CCP110-208ENST00000566523 SPDYE2Q495Y8 402 aa20.93■□□□□ 0.94
CCP110-208ENST00000566523 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
CCP110-208ENST00000566523 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
CCP110-208ENST00000566523 SSUH2Q9Y2M2 353 aa20.75■□□□□ 0.91
CCP110-208ENST00000566523 CHRDL2Q6WN34 429 aa20.65■□□□□ 0.9
CCP110-208ENST00000566523 PITPNM1O00562 1244 aa20.56■□□□□ 0.88
CCP110-208ENST00000566523 POTEHQ6S545 545 aa20.56■□□□□ 0.88
CCP110-208ENST00000566523 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCP110-208ENST00000566523 SPDYE4A6NLX3 237 aa20.45■□□□□ 0.86
CCP110-208ENST00000566523 SPDYE1Q8NFV5 336 aaPredicted RBP20.41■□□□□ 0.86
CCP110-208ENST00000566523 CLEC11AQ9Y240 323 aa20.32■□□□□ 0.84
CCP110-208ENST00000566523 PIP4P2Q8N4L2 257 aa20.3■□□□□ 0.84
CCP110-208ENST00000566523 FXR2P51116 673 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCP110-208ENST00000566523 PROM2Q8N271 834 aa20.11■□□□□ 0.81
CCP110-208ENST00000566523 PRR29P0C7W0 189 aa20.09■□□□□ 0.81
CCP110-208ENST00000566523 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
CCP110-208ENST00000566523 PRKAR2AP13861 404 aaKnown RBP20.02■□□□□ 0.8
CCP110-208ENST00000566523 FKBP8Q14318 412 aa20■□□□□ 0.79
CCP110-208ENST00000566523 CHADLQ6NUI6 762 aa19.91■□□□□ 0.78
CCP110-208ENST00000566523 CREBZFQ9NS37 354 aa19.77■□□□□ 0.76
CCP110-208ENST00000566523 HAX1O00165 279 aa19.74■□□□□ 0.75
CCP110-208ENST00000566523 FARP1Q9Y4F1 1045 aaPredicted RBP19.69■□□□□ 0.74
CCP110-208ENST00000566523 C19orf67A6NJJ6 358 aa19.62■□□□□ 0.73
CCP110-208ENST00000566523 EVX2Q03828 476 aa19.6■□□□□ 0.73
CCP110-208ENST00000566523 SP7Q8TDD2 431 aaPredicted RBP19.55■□□□□ 0.72
CCP110-208ENST00000566523 MNX1P50219 401 aaPredicted RBP19.53■□□□□ 0.72
CCP110-208ENST00000566523 MIER1Q8N108 512 aa19.42■□□□□ 0.7
CCP110-208ENST00000566523 FBXO3Q9UK99 471 aa19.41■□□□□ 0.7
CCP110-208ENST00000566523 CD44P16070 742 aaKnown RBP19.4■□□□□ 0.7
CCP110-208ENST00000566523 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCP110-208ENST00000566523 PLCD3Q8N3E9 789 aa19.33■□□□□ 0.68
CCP110-208ENST00000566523 PLEKHG5O94827 1062 aa19.32■□□□□ 0.68
CCP110-208ENST00000566523 ZRANB1Q9UGI0 708 aa19.22■□□□□ 0.67
CCP110-208ENST00000566523 GABBR2O75899 941 aa19.18■□□□□ 0.66
CCP110-208ENST00000566523 VASPP50552 380 aaPredicted RBP19.18■□□□□ 0.66
CCP110-208ENST00000566523 ZNF579Q8NAF0 562 aaKnown RBP19.16■□□□□ 0.66
CCP110-208ENST00000566523 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
CCP110-208ENST00000566523 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.65
CCP110-208ENST00000566523 CLCN6P51797 869 aa19.06■□□□□ 0.64
CCP110-208ENST00000566523 RASEFQ8IZ41 740 aa19.06■□□□□ 0.64
CCP110-208ENST00000566523 NUBP1P53384 320 aa19.04■□□□□ 0.64
CCP110-208ENST00000566523 TSPYL2Q9H2G4 693 aaPredicted RBP19.03■□□□□ 0.64
CCP110-208ENST00000566523 PHF12Q96QT6 1004 aa19.01■□□□□ 0.63
CCP110-208ENST00000566523 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms