RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TMX4Q9H1E5 349 aaPredicted RBP6.24□□□□□ -1.41
SMG1-211ENST00000565324 GOLGA6L7A0A1B0GV03 622 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 NEXNQ0ZGT2 675 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 FAM43AQ8N2R8 423 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 REC8O95072 547 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 INCENPQ9NQS7 918 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 NAT10Q9H0A0 1025 aaKnown RBP6.24□□□□□ -1.41
SMG1-211ENST00000565324 PLPPR3Q6T4P5 718 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 CCNB3Q8WWL7 1395 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
SMG1-211ENST00000565324 FAM13BQ9NYF5 915 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 CPLX2Q6PUV4 134 aaKnown RBP6.23□□□□□ -1.41
SMG1-211ENST00000565324 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMG1-211ENST00000565324 STK31Q9BXU1 1019 aa6.23□□□□□ -1.41
SMG1-211ENST00000565324 CCP110O43303 1012 aa6.23□□□□□ -1.41
SMG1-211ENST00000565324 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
SMG1-211ENST00000565324 ARHGAP35Q9NRY4 1499 aa6.23□□□□□ -1.41
SMG1-211ENST00000565324 FANCIQ9NVI1 1328 aa6.23□□□□□ -1.41
SMG1-211ENST00000565324 LEKR1Q6ZMV7 388 aa6.23□□□□□ -1.41
SMG1-211ENST00000565324 CAVIN1Q6NZI2 390 aaKnown RBP6.23□□□□□ -1.41
SMG1-211ENST00000565324 LETM1O95202 739 aaPredicted RBP6.22□□□□□ -1.41
SMG1-211ENST00000565324 KIF27Q86VH2 1401 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 CCDC39Q9UFE4 941 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 STK11IPQ8N1F8 1099 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 CREBRFQ8IUR6 639 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 TNIKQ9UKE5 1360 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 HDGFL2Q7Z4V5 671 aaPredicted RBP6.22□□□□□ -1.41
SMG1-211ENST00000565324 FAM184AQ8NB25 1140 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 SMC4Q9NTJ3 1288 aa6.22□□□□□ -1.41
SMG1-211ENST00000565324 HMGN5P82970 282 aaKnown RBP6.22□□□□□ -1.41
SMG1-211ENST00000565324 MARCH6O60337 910 aa6.21□□□□□ -1.41
SMG1-211ENST00000565324 ZNF592Q92610 1267 aa6.21□□□□□ -1.41
SMG1-211ENST00000565324 MNS1Q8NEH6 495 aa6.21□□□□□ -1.41
SMG1-211ENST00000565324 TSHZ2Q9NRE2 1034 aa6.21□□□□□ -1.41
SMG1-211ENST00000565324 KIAA0754O94854 1291 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 PRKCSHP14314 528 aaPredicted RBP6.21□□□□□ -1.42
SMG1-211ENST00000565324 AKAP17AQ02040 695 aaKnown RBP6.21□□□□□ -1.42
SMG1-211ENST00000565324 RUFY2Q8WXA3 655 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 TRIM29Q14134 588 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 TSPYL1Q9H0U9 437 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 SETD5Q9C0A6 1442 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 ANO8Q9HCE9 1232 aaPredicted RBP6.21□□□□□ -1.42
SMG1-211ENST00000565324 PKNOX2Q96KN3 472 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 TCEAL9Q9UHQ7 104 aa6.21□□□□□ -1.42
SMG1-211ENST00000565324 CHMP7Q8WUX9 453 aaPredicted RBP6.2□□□□□ -1.42
SMG1-211ENST00000565324 CENPJQ9HC77 1338 aaPredicted RBP6.2□□□□□ -1.42
SMG1-211ENST00000565324 ROCK1Q13464 1354 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 PDE4CQ08493 712 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 SASS6Q6UVJ0 657 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 NGEFQ8N5V2 710 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 CGNL1Q0VF96 1302 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 SRPK2P78362 688 aaKnown RBP6.2□□□□□ -1.42
SMG1-211ENST00000565324 AAMPQ13685 434 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 TAF7LQ5H9L4 462 aa6.2□□□□□ -1.42
SMG1-211ENST00000565324 LMOD2Q6P5Q4 547 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 ODF2Q5BJF6 829 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 SYNE3Q6ZMZ3 975 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 TXLNBQ8N3L3 684 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 IFT57Q9NWB7 429 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 APBB1O00213 710 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 NUCB2P80303 420 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 KIF7Q2M1P5 1343 aa6.19□□□□□ -1.42
SMG1-211ENST00000565324 PCMTD1Q96MG8 357 aaPredicted RBP6.19□□□□□ -1.42
SMG1-211ENST00000565324 GOLGA6L10A6NI86 522 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 DYDC1Q8WWB3 177 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 KIF15Q9NS87 1388 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 ERLIN2O94905 339 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 AMOTL1Q8IY63 956 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 BAZ1AQ9NRL2 1556 aaPredicted RBP6.18□□□□□ -1.42
SMG1-211ENST00000565324 MRE11P49959 708 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 ANKRD18AQ8IVF6 992 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 CT47A1Q5JQC4 288 aaPredicted RBP6.18□□□□□ -1.42
SMG1-211ENST00000565324 DCAF11Q8TEB1 546 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 LUC7LQ9NQ29 371 aaKnown RBP6.18□□□□□ -1.42
SMG1-211ENST00000565324 CHMP5Q9NZZ3 219 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 VPS53Q5VIR6 699 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 DEF6Q9H4E7 631 aa6.18□□□□□ -1.42
SMG1-211ENST00000565324 ZKSCAN1P17029 563 aaPredicted RBP6.17□□□□□ -1.42
SMG1-211ENST00000565324 BICD2Q8TD16 824 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 ERLIN1O75477 346 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 PDE4AP27815 886 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 RNF20Q5VTR2 975 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 TERF2IPQ9NYB0 399 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 PLEKHG5O94827 1062 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 RRP9O43818 475 aaKnown RBP6.17□□□□□ -1.42
SMG1-211ENST00000565324 RABEP1Q15276 862 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 EZRP15311 586 aaKnown RBP6.17□□□□□ -1.42
SMG1-211ENST00000565324 NLRP13Q86W25 1043 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 WWC1Q8IX03 1113 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 RB1CC1Q8TDY2 1594 aa6.17□□□□□ -1.42
SMG1-211ENST00000565324 U2AF1L5P0DN76 240 aaPredicted RBP6.17□□□□□ -1.42
SMG1-211ENST00000565324 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMG1-211ENST00000565324 EIF3JO75822 258 aaKnown RBP6.16□□□□□ -1.42
SMG1-211ENST00000565324 NASPP49321 788 aaPredicted RBP6.16□□□□□ -1.42
SMG1-211ENST00000565324 NEFHP12036 1026 aa6.16□□□□□ -1.42
SMG1-211ENST00000565324 AXDND1Q5T1B0 1012 aaPredicted RBP6.16□□□□□ -1.42
SMG1-211ENST00000565324 PIP4K2AP48426 406 aaPredicted RBP6.16□□□□□ -1.42
SMG1-211ENST00000565324 IQCEQ6IPM2 695 aa6.16□□□□□ -1.42
SMG1-211ENST00000565324 CHMP3Q9Y3E7 222 aa6.16□□□□□ -1.42
SMG1-211ENST00000565324 OLFM4Q6UX06 510 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms