RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 CNGB1Q14028 1251 aaPredicted RBP9.83□□□□□ -0.84
SMG1-210ENST00000565224 ARHGEF5Q12774 1597 aa9.83□□□□□ -0.84
SMG1-210ENST00000565224 RNF123Q5XPI4 1314 aa9.83□□□□□ -0.84
SMG1-210ENST00000565224 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
SMG1-210ENST00000565224 TMC1Q8TDI8 760 aa9.82□□□□□ -0.84
SMG1-210ENST00000565224 KTN1Q86UP2 1357 aaKnown RBP9.82□□□□□ -0.84
SMG1-210ENST00000565224 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
SMG1-210ENST00000565224 ST20-MTHFSA0A0A6YYL1 179 aa9.81□□□□□ -0.84
SMG1-210ENST00000565224 HNRNPMP52272 730 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMG1-210ENST00000565224 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
SMG1-210ENST00000565224 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
SMG1-210ENST00000565224 DCAF11Q8TEB1 546 aa9.8□□□□□ -0.84
SMG1-210ENST00000565224 RALBP1Q15311 655 aa9.8□□□□□ -0.84
SMG1-210ENST00000565224 BRD4O60885 1362 aaPredicted RBP9.8□□□□□ -0.84
SMG1-210ENST00000565224 LRPPRCP42704 1394 aaKnown RBP9.8□□□□□ -0.84
SMG1-210ENST00000565224 MYBBP1AQ9BQG0 1328 aaKnown RBP9.79□□□□□ -0.84
SMG1-210ENST00000565224 FAM135AQ9P2D6 1515 aa9.79□□□□□ -0.84
SMG1-210ENST00000565224 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
SMG1-210ENST00000565224 SAMD9LQ8IVG5 1584 aa9.78□□□□□ -0.84
SMG1-210ENST00000565224 PREX2Q70Z35 1606 aa9.77□□□□□ -0.85
SMG1-210ENST00000565224 E9PCH4 1651 aa9.77□□□□□ -0.85
SMG1-210ENST00000565224 CCDC144AA2RUR9 1427 aa9.77□□□□□ -0.85
SMG1-210ENST00000565224 PRAG1Q86YV5 1406 aa9.77□□□□□ -0.85
SMG1-210ENST00000565224 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
SMG1-210ENST00000565224 GPRASP1Q5JY77 1395 aa9.75□□□□□ -0.85
SMG1-210ENST00000565224 TRPM1Q7Z4N2 1603 aa9.75□□□□□ -0.85
SMG1-210ENST00000565224 CDC42BPBQ9Y5S2 1711 aa9.75□□□□□ -0.85
SMG1-210ENST00000565224 MAST1Q9Y2H9 1570 aa9.74□□□□□ -0.85
SMG1-210ENST00000565224 PARD3Q8TEW0 1356 aa9.74□□□□□ -0.85
SMG1-210ENST00000565224 UNC13BO14795 1591 aa9.74□□□□□ -0.85
SMG1-210ENST00000565224 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
SMG1-210ENST00000565224 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
SMG1-210ENST00000565224 SYCP2Q9BX26 1530 aa9.74□□□□□ -0.85
SMG1-210ENST00000565224 PLA2R1Q13018 1463 aa9.73□□□□□ -0.85
SMG1-210ENST00000565224 A2MP01023 1474 aa9.72□□□□□ -0.85
SMG1-210ENST00000565224 ARHGAP5Q13017 1502 aa9.72□□□□□ -0.85
SMG1-210ENST00000565224 LAMC1P11047 1609 aa9.72□□□□□ -0.85
SMG1-210ENST00000565224 COL17A1Q9UMD9 1497 aaPredicted RBP9.72□□□□□ -0.85
SMG1-210ENST00000565224 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.85
SMG1-210ENST00000565224 RRP1P56182 461 aaKnown RBP9.71□□□□□ -0.85
SMG1-210ENST00000565224 PDE3BQ13370 1112 aa9.71□□□□□ -0.85
SMG1-210ENST00000565224 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.85
SMG1-210ENST00000565224 RGL3Q3MIN7 710 aa9.71□□□□□ -0.85
SMG1-210ENST00000565224 PRDM15P57071 1507 aaPredicted RBP9.71□□□□□ -0.86
SMG1-210ENST00000565224 PLEKHH2Q8IVE3 1493 aa9.71□□□□□ -0.86
SMG1-210ENST00000565224 WASHC2CQ9Y4E1 1318 aa9.71□□□□□ -0.86
SMG1-210ENST00000565224 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.86
SMG1-210ENST00000565224 PLXNC1O60486 1568 aa9.7□□□□□ -0.86
SMG1-210ENST00000565224 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
SMG1-210ENST00000565224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.7□□□□□ -0.862e-12■□□□□ 10.8
SMG1-210ENST00000565224 BCL11AQ9H165 835 aa9.7□□□□□ -0.86
SMG1-210ENST00000565224 NOP58Q9Y2X3 529 aaKnown RBP9.7□□□□□ -0.86
SMG1-210ENST00000565224 IQGAP3Q86VI3 1631 aa9.7□□□□□ -0.86
SMG1-210ENST00000565224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMG1-210ENST00000565224 EIF2AK4Q9P2K8 1649 aaKnown RBP9.7□□□□□ -0.86
SMG1-210ENST00000565224 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
SMG1-210ENST00000565224 INSRP06213 1382 aa9.69□□□□□ -0.86
SMG1-210ENST00000565224 TESK2Q96S53 571 aa9.69□□□□□ -0.86
SMG1-210ENST00000565224 ATP10AO60312 1499 aa9.69□□□□□ -0.86
SMG1-210ENST00000565224 DISP3Q9P2K9 1392 aa9.69□□□□□ -0.86
SMG1-210ENST00000565224 DUOX2Q9NRD8 1548 aa9.69□□□□□ -0.86
SMG1-210ENST00000565224 ERBINQ96RT1 1412 aa9.68□□□□□ -0.86
SMG1-210ENST00000565224 ZMYM4Q5VZL5 1548 aa9.68□□□□□ -0.86
SMG1-210ENST00000565224 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
SMG1-210ENST00000565224 ANP32AP39687 249 aaKnown RBP9.68□□□□□ -0.86
SMG1-210ENST00000565224 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
SMG1-210ENST00000565224 BLMP54132 1417 aaPredicted RBP9.67□□□□□ -0.86
SMG1-210ENST00000565224 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
SMG1-210ENST00000565224 TMF1P82094 1093 aa9.67□□□□□ -0.86
SMG1-210ENST00000565224 ABCC2Q92887 1545 aa9.67□□□□□ -0.86
SMG1-210ENST00000565224 EXOC6Q8TAG9 804 aa9.66□□□□□ -0.86
SMG1-210ENST00000565224 MYO5CQ9NQX4 1742 aa9.66□□□□□ -0.86
SMG1-210ENST00000565224 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
SMG1-210ENST00000565224 PANK3Q9H999 370 aa9.66□□□□□ -0.86
SMG1-210ENST00000565224 SALL2Q9Y467 1007 aaPredicted RBP9.66□□□□□ -0.86
SMG1-210ENST00000565224 IPO9Q96P70 1041 aaKnown RBP9.65□□□□□ -0.86
SMG1-210ENST00000565224 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
SMG1-210ENST00000565224 PAK3O75914 559 aaPredicted RBP9.64□□□□□ -0.87
SMG1-210ENST00000565224 RNF17Q9BXT8 1623 aaKnown RBP9.64□□□□□ -0.87
SMG1-210ENST00000565224 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
SMG1-210ENST00000565224 PLCH2O75038 1416 aa9.64□□□□□ -0.87
SMG1-210ENST00000565224 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
SMG1-210ENST00000565224 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
SMG1-210ENST00000565224 EFCAB2Q5VUJ9 269 aa9.62□□□□□ -0.87
SMG1-210ENST00000565224 ABCC1P33527 1531 aa9.61□□□□□ -0.87
SMG1-210ENST00000565224 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
SMG1-210ENST00000565224 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
SMG1-210ENST00000565224 ASXL2Q76L83 1435 aa9.61□□□□□ -0.87
SMG1-210ENST00000565224 MS4A1P11836 297 aa9.6□□□□□ -0.87
SMG1-210ENST00000565224 WDR7Q9Y4E6 1490 aa9.6□□□□□ -0.87
SMG1-210ENST00000565224 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
SMG1-210ENST00000565224 TRAPPC8Q9Y2L5 1435 aa9.6□□□□□ -0.87
SMG1-210ENST00000565224 TRPM2O94759 1503 aa9.59□□□□□ -0.87
SMG1-210ENST00000565224 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
SMG1-210ENST00000565224 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
SMG1-210ENST00000565224 NBR1Q14596 966 aa9.59□□□□□ -0.87
SMG1-210ENST00000565224 CDCA8Q53HL2 280 aa9.59□□□□□ -0.87
SMG1-210ENST00000565224 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
SMG1-210ENST00000565224 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
SMG1-210ENST00000565224 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms