RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
PKM-214ENST00000565143 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
PKM-214ENST00000565143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
PKM-214ENST00000565143 KDM2AQ9Y2K7 1162 aa17.39■□□□□ 0.38
PKM-214ENST00000565143 ABCC2Q92887 1545 aa17.39■□□□□ 0.37
PKM-214ENST00000565143 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.37
PKM-214ENST00000565143 PLXNC1O60486 1568 aa17.39■□□□□ 0.37
PKM-214ENST00000565143 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
PKM-214ENST00000565143 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
PKM-214ENST00000565143 ANP32EQ9BTT0 268 aa17.38■□□□□ 0.37
PKM-214ENST00000565143 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
PKM-214ENST00000565143 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
PKM-214ENST00000565143 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
PKM-214ENST00000565143 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
PKM-214ENST00000565143 E9PCH4 1651 aa17.34■□□□□ 0.37
PKM-214ENST00000565143 RALBP1Q15311 655 aa17.34■□□□□ 0.37
PKM-214ENST00000565143 DUOX2Q9NRD8 1548 aa17.34■□□□□ 0.37
PKM-214ENST00000565143 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
PKM-214ENST00000565143 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.36
PKM-214ENST00000565143 BRD4O60885 1362 aaPredicted RBP17.32■□□□□ 0.36
PKM-214ENST00000565143 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
PKM-214ENST00000565143 LAMC1P11047 1609 aa17.32■□□□□ 0.36
PKM-214ENST00000565143 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
PKM-214ENST00000565143 PLA2R1Q13018 1463 aa17.31■□□□□ 0.36
PKM-214ENST00000565143 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
PKM-214ENST00000565143 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
PKM-214ENST00000565143 MAGI2Q86UL8 1455 aa17.3■□□□□ 0.36
PKM-214ENST00000565143 ATP10AO60312 1499 aa17.3■□□□□ 0.36
PKM-214ENST00000565143 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
PKM-214ENST00000565143 EIF2AK4Q9P2K8 1649 aaKnown RBP17.29■□□□□ 0.36
PKM-214ENST00000565143 A2MP01023 1474 aa17.29■□□□□ 0.36
PKM-214ENST00000565143 PLCH2O75038 1416 aa17.29■□□□□ 0.36
PKM-214ENST00000565143 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
PKM-214ENST00000565143 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
PKM-214ENST00000565143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
PKM-214ENST00000565143 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
PKM-214ENST00000565143 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
PKM-214ENST00000565143 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
PKM-214ENST00000565143 FANCIQ9NVI1 1328 aa17.26■□□□□ 0.35
PKM-214ENST00000565143 EFCAB2Q5VUJ9 269 aa17.26■□□□□ 0.35
PKM-214ENST00000565143 RGL3Q3MIN7 710 aa17.25■□□□□ 0.35
PKM-214ENST00000565143 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
PKM-214ENST00000565143 ABCC1P33527 1531 aa17.23■□□□□ 0.35
PKM-214ENST00000565143 COL17A1Q9UMD9 1497 aaPredicted RBP17.23■□□□□ 0.35
PKM-214ENST00000565143 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
PKM-214ENST00000565143 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
PKM-214ENST00000565143 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
PKM-214ENST00000565143 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
PKM-214ENST00000565143 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
PKM-214ENST00000565143 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
PKM-214ENST00000565143 ARAP3Q8WWN8 1544 aa17.2■□□□□ 0.34
PKM-214ENST00000565143 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
PKM-214ENST00000565143 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
PKM-214ENST00000565143 TESK2Q96S53 571 aa17.18■□□□□ 0.34
PKM-214ENST00000565143 RNF17Q9BXT8 1623 aaKnown RBP17.17■□□□□ 0.34
PKM-214ENST00000565143 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
PKM-214ENST00000565143 TMF1P82094 1093 aa17.16■□□□□ 0.34
PKM-214ENST00000565143 INSRP06213 1382 aa17.16■□□□□ 0.34
PKM-214ENST00000565143 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
PKM-214ENST00000565143 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
PKM-214ENST00000565143 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.34
PKM-214ENST00000565143 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
PKM-214ENST00000565143 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
PKM-214ENST00000565143 TRPM2O94759 1503 aa17.12■□□□□ 0.33
PKM-214ENST00000565143 MSH5O43196 834 aa17.12■□□□□ 0.33
PKM-214ENST00000565143 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
PKM-214ENST00000565143 ZFYVE16Q7Z3T8 1539 aa17.12■□□□□ 0.33
PKM-214ENST00000565143 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
PKM-214ENST00000565143 PANK3Q9H999 370 aa17.1■□□□□ 0.33
PKM-214ENST00000565143 CEP152O94986 1710 aa17.1■□□□□ 0.33
PKM-214ENST00000565143 PTPRTO14522 1441 aa17.1■□□□□ 0.33
PKM-214ENST00000565143 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
PKM-214ENST00000565143 SPHKAPQ2M3C7 1700 aa17.09■□□□□ 0.33
PKM-214ENST00000565143 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
PKM-214ENST00000565143 TET3O43151 1660 aa17.08■□□□□ 0.32
PKM-214ENST00000565143 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
PKM-214ENST00000565143 RRP1P56182 461 aaKnown RBP17.07■□□□□ 0.32
PKM-214ENST00000565143 KANK1Q14678 1352 aa17.07■□□□□ 0.32
PKM-214ENST00000565143 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
PKM-214ENST00000565143 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
PKM-214ENST00000565143 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
PKM-214ENST00000565143 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
PKM-214ENST00000565143 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
PKM-214ENST00000565143 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
PKM-214ENST00000565143 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
PKM-214ENST00000565143 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
PKM-214ENST00000565143 ABCA9Q8IUA7 1624 aa17.05■□□□□ 0.32
PKM-214ENST00000565143 NEURL4Q96JN8 1562 aa17.05■□□□□ 0.32
PKM-214ENST00000565143 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
PKM-214ENST00000565143 ATP7AQ04656 1500 aa17.05■□□□□ 0.32
PKM-214ENST00000565143 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
PKM-214ENST00000565143 CLTCL1P53675 1640 aa17.04■□□□□ 0.32
PKM-214ENST00000565143 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
PKM-214ENST00000565143 FANCAO15360 1455 aa17.03■□□□□ 0.32
PKM-214ENST00000565143 KIAA1210Q9ULL0 1709 aa17.02■□□□□ 0.32
PKM-214ENST00000565143 SYNMO15061 1565 aa17.02■□□□□ 0.31
PKM-214ENST00000565143 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
PKM-214ENST00000565143 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
PKM-214ENST00000565143 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
PKM-214ENST00000565143 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms