RNA–Protein interactions for RNA: ENST00000562614.1

LINC02140-201, Transcript of long intergenic non-protein coding RNA 2140, humanhuman

TSL 5

Gene LINC02140, Length 427 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02140-201ENST00000562614 SHANK2Q9UPX8 1470 aa11.45□□□□□ -0.58
LINC02140-201ENST00000562614 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
LINC02140-201ENST00000562614 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
LINC02140-201ENST00000562614 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
LINC02140-201ENST00000562614 PARD3Q8TEW0 1356 aa11.44□□□□□ -0.58
LINC02140-201ENST00000562614 BCORL1Q5H9F3 1711 aa11.44□□□□□ -0.58
LINC02140-201ENST00000562614 EXOC6Q8TAG9 804 aa11.44□□□□□ -0.58
LINC02140-201ENST00000562614 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
LINC02140-201ENST00000562614 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
LINC02140-201ENST00000562614 KDM6BO15054 1643 aa11.42□□□□□ -0.58
LINC02140-201ENST00000562614 NBPF8Q3BBV2 869 aa11.42□□□□□ -0.58
LINC02140-201ENST00000562614 FRAT1Q92837 279 aaPredicted RBP11.42□□□□□ -0.58
LINC02140-201ENST00000562614 ADCY10Q96PN6 1610 aa11.42□□□□□ -0.58
LINC02140-201ENST00000562614 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
LINC02140-201ENST00000562614 ABCC5O15440 1437 aa11.41□□□□□ -0.58
LINC02140-201ENST00000562614 PZPP20742 1482 aa11.4□□□□□ -0.58
LINC02140-201ENST00000562614 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
LINC02140-201ENST00000562614 MAGI3Q5TCQ9 1506 aa11.4□□□□□ -0.59
LINC02140-201ENST00000562614 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
LINC02140-201ENST00000562614 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
LINC02140-201ENST00000562614 PNNQ9H307 717 aaKnown RBP11.39□□□□□ -0.59
LINC02140-201ENST00000562614 BRPF3Q9ULD4 1205 aa11.39□□□□□ -0.59
LINC02140-201ENST00000562614 NUP160Q12769 1436 aa11.38□□□□□ -0.59
LINC02140-201ENST00000562614 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
LINC02140-201ENST00000562614 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.38□□□□□ -0.59
LINC02140-201ENST00000562614 CGNL1Q0VF96 1302 aa11.37□□□□□ -0.59
LINC02140-201ENST00000562614 KDM2BQ8NHM5 1336 aa11.37□□□□□ -0.59
LINC02140-201ENST00000562614 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
LINC02140-201ENST00000562614 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
LINC02140-201ENST00000562614 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
LINC02140-201ENST00000562614 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
LINC02140-201ENST00000562614 GOLGA6L3A6NEY3 463 aa11.36□□□□□ -0.59
LINC02140-201ENST00000562614 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
LINC02140-201ENST00000562614 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
LINC02140-201ENST00000562614 TPM2P07951 284 aa11.35□□□□□ -0.59
LINC02140-201ENST00000562614 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
LINC02140-201ENST00000562614 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
LINC02140-201ENST00000562614 PLXNC1O60486 1568 aa11.34□□□□□ -0.59
LINC02140-201ENST00000562614 COL17A1Q9UMD9 1497 aaPredicted RBP11.34□□□□□ -0.59
LINC02140-201ENST00000562614 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
LINC02140-201ENST00000562614 CLCN1P35523 988 aa11.34□□□□□ -0.59
LINC02140-201ENST00000562614 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
LINC02140-201ENST00000562614 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC02140-201ENST00000562614 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
LINC02140-201ENST00000562614 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
LINC02140-201ENST00000562614 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
LINC02140-201ENST00000562614 MRE11P49959 708 aa11.33□□□□□ -0.6
LINC02140-201ENST00000562614 ANP32BQ92688 251 aaKnown RBP11.33□□□□□ -0.6
LINC02140-201ENST00000562614 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
LINC02140-201ENST00000562614 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
LINC02140-201ENST00000562614 ANKRD50Q9ULJ7 1429 aa11.33□□□□□ -0.6
LINC02140-201ENST00000562614 GPRASP1Q5JY77 1395 aa11.32□□□□□ -0.6
LINC02140-201ENST00000562614 ADAMTS12P58397 1594 aa11.32□□□□□ -0.6
LINC02140-201ENST00000562614 TMF1P82094 1093 aa11.31□□□□□ -0.6
LINC02140-201ENST00000562614 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
LINC02140-201ENST00000562614 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
LINC02140-201ENST00000562614 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
LINC02140-201ENST00000562614 PMFBP1Q8TBY8 1022 aa11.31□□□□□ -0.6
LINC02140-201ENST00000562614 TRIM44Q96DX7 344 aaPredicted RBP11.31□□□□□ -0.6
LINC02140-201ENST00000562614 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
LINC02140-201ENST00000562614 KIAA0556O60303 1618 aa11.31□□□□□ -0.6
LINC02140-201ENST00000562614 ABCC2Q92887 1545 aa11.3□□□□□ -0.6
LINC02140-201ENST00000562614 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
LINC02140-201ENST00000562614 SKOR2Q2VWA4 1001 aaPredicted RBP11.3□□□□□ -0.6
LINC02140-201ENST00000562614 PRDM15P57071 1507 aaPredicted RBP11.3□□□□□ -0.6
LINC02140-201ENST00000562614 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
LINC02140-201ENST00000562614 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
LINC02140-201ENST00000562614 ARHGEF5Q12774 1597 aa11.29□□□□□ -0.6
LINC02140-201ENST00000562614 PIK3C2GO75747 1445 aa11.29□□□□□ -0.6
LINC02140-201ENST00000562614 PKD2Q13563 968 aa11.29□□□□□ -0.6
LINC02140-201ENST00000562614 C8orf34Q49A92 452 aa11.29□□□□□ -0.6
LINC02140-201ENST00000562614 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
LINC02140-201ENST00000562614 NKTRP30414 1462 aaKnown RBP11.29□□□□□ -0.6
LINC02140-201ENST00000562614 PTPRGP23470 1445 aa11.28□□□□□ -0.6
LINC02140-201ENST00000562614 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
LINC02140-201ENST00000562614 TERF1P54274 439 aa11.28□□□□□ -0.6
LINC02140-201ENST00000562614 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
LINC02140-201ENST00000562614 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
LINC02140-201ENST00000562614 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
LINC02140-201ENST00000562614 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
LINC02140-201ENST00000562614 SYNMO15061 1565 aa11.27□□□□□ -0.61
LINC02140-201ENST00000562614 CCDC141Q6ZP82 1450 aa11.26□□□□□ -0.61
LINC02140-201ENST00000562614 ST20-MTHFSA0A0A6YYL1 179 aa11.26□□□□□ -0.61
LINC02140-201ENST00000562614 E9PSI1 815 aa11.26□□□□□ -0.61
LINC02140-201ENST00000562614 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
LINC02140-201ENST00000562614 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
LINC02140-201ENST00000562614 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
LINC02140-201ENST00000562614 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
LINC02140-201ENST00000562614 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
LINC02140-201ENST00000562614 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
LINC02140-201ENST00000562614 NUP155O75694 1391 aa11.25□□□□□ -0.61
LINC02140-201ENST00000562614 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
LINC02140-201ENST00000562614 FOXD1Q16676 465 aa11.24□□□□□ -0.61
LINC02140-201ENST00000562614 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
LINC02140-201ENST00000562614 GBP4Q96PP9 640 aa11.24□□□□□ -0.61
LINC02140-201ENST00000562614 PDCL3Q9H2J4 239 aa11.24□□□□□ -0.61
LINC02140-201ENST00000562614 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
LINC02140-201ENST00000562614 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
LINC02140-201ENST00000562614 ERBINQ96RT1 1412 aa11.24□□□□□ -0.61
LINC02140-201ENST00000562614 URB2Q14146 1524 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms