RNA–Protein interactions for RNA: ENST00000562002.5

LINC01227-203, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 2

Gene LINC01227, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-203ENST00000562002 VPS9D1Q9Y2B5 631 aa17.26■□□□□ 0.35
LINC01227-203ENST00000562002 ZBED2Q9BTP6 218 aa17.25■□□□□ 0.35
LINC01227-203ENST00000562002 PPP1R3GB7ZBB8 358 aa17.21■□□□□ 0.35
LINC01227-203ENST00000562002 COL9A1P20849 921 aa17.18■□□□□ 0.34
LINC01227-203ENST00000562002 NBR1Q14596 966 aa17.18■□□□□ 0.34
LINC01227-203ENST00000562002 C6orf132Q5T0Z8 1188 aa17.17■□□□□ 0.34
LINC01227-203ENST00000562002 KCNV2Q8TDN2 545 aa17.17■□□□□ 0.34
LINC01227-203ENST00000562002 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
LINC01227-203ENST00000562002 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
LINC01227-203ENST00000562002 BHMG1C9JSJ3 638 aaPredicted RBP17.14■□□□□ 0.33
LINC01227-203ENST00000562002 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
LINC01227-203ENST00000562002 GRXCR2A6NFK2 248 aa17.1■□□□□ 0.33
LINC01227-203ENST00000562002 PROX2Q3B8N5 592 aa17.1■□□□□ 0.33
LINC01227-203ENST00000562002 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
LINC01227-203ENST00000562002 MAP3K7O43318 606 aa17.08■□□□□ 0.32
LINC01227-203ENST00000562002 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
LINC01227-203ENST00000562002 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
LINC01227-203ENST00000562002 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
LINC01227-203ENST00000562002 OSBPP22059 807 aa17.04■□□□□ 0.32
LINC01227-203ENST00000562002 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
LINC01227-203ENST00000562002 RABGEF1Q9UJ41 708 aa17.04■□□□□ 0.32
LINC01227-203ENST00000562002 NBPF3Q9H094 633 aa17.03■□□□□ 0.32
LINC01227-203ENST00000562002 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
LINC01227-203ENST00000562002 KCTD12Q96CX2 325 aaKnown RBP17.02■□□□□ 0.32
LINC01227-203ENST00000562002 ONECUT3O60422 494 aaPredicted RBP17■□□□□ 0.31
LINC01227-203ENST00000562002 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
LINC01227-203ENST00000562002 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
LINC01227-203ENST00000562002 MLLT3P42568 568 aaPredicted RBP16.96■□□□□ 0.31
LINC01227-203ENST00000562002 KIAA1468Q9P260 1216 aa16.96■□□□□ 0.31
LINC01227-203ENST00000562002 CDHR5Q9HBB8 845 aa16.93■□□□□ 0.3
LINC01227-203ENST00000562002 GOLGA8CPA6NN73 597 aa16.92■□□□□ 0.3
LINC01227-203ENST00000562002 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
LINC01227-203ENST00000562002 LAPTM4BQ86VI4 370 aa16.91■□□□□ 0.3
LINC01227-203ENST00000562002 TSKSQ9UJT2 592 aa16.91■□□□□ 0.3
LINC01227-203ENST00000562002 THSD4Q6ZMP0 1018 aa16.9■□□□□ 0.3
LINC01227-203ENST00000562002 WNT2BQ93097 391 aa16.9■□□□□ 0.3
LINC01227-203ENST00000562002 KDM2AQ9Y2K7 1162 aa16.9■□□□□ 0.3
LINC01227-203ENST00000562002 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
LINC01227-203ENST00000562002 PRSS12P56730 875 aa16.87■□□□□ 0.29
LINC01227-203ENST00000562002 SEPT9Q9UHD8 586 aaPredicted RBP16.87■□□□□ 0.29
LINC01227-203ENST00000562002 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
LINC01227-203ENST00000562002 SEMA3EO15041 775 aa16.84■□□□□ 0.29
LINC01227-203ENST00000562002 PTPN5P54829 565 aa16.84■□□□□ 0.29
LINC01227-203ENST00000562002 PACS2Q86VP3 889 aa16.83■□□□□ 0.28
LINC01227-203ENST00000562002 NPDC1Q9NQX5 325 aaPredicted RBP16.83■□□□□ 0.28
LINC01227-203ENST00000562002 ANKK1Q8NFD2 765 aa16.82■□□□□ 0.28
LINC01227-203ENST00000562002 ZFRQ96KR1 1074 aaKnown RBP16.82■□□□□ 0.28
LINC01227-203ENST00000562002 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
LINC01227-203ENST00000562002 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
LINC01227-203ENST00000562002 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
LINC01227-203ENST00000562002 C3orf80F5H4A9 247 aa16.76■□□□□ 0.27
LINC01227-203ENST00000562002 SOWAHBA6NEL2 793 aa16.75■□□□□ 0.27
LINC01227-203ENST00000562002 BCAMP50895 628 aa16.75■□□□□ 0.27
LINC01227-203ENST00000562002 TTC13Q8NBP0 860 aa16.75■□□□□ 0.27
LINC01227-203ENST00000562002 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
LINC01227-203ENST00000562002 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
LINC01227-203ENST00000562002 SMAPO00193 183 aa16.73■□□□□ 0.27
LINC01227-203ENST00000562002 PADI6Q6TGC4 694 aa16.72■□□□□ 0.27
LINC01227-203ENST00000562002 TATDN2Q93075 761 aa16.72■□□□□ 0.27
LINC01227-203ENST00000562002 PLA2G2EQ9NZK7 142 aa16.72■□□□□ 0.27
LINC01227-203ENST00000562002 PNMA3Q9UL41 463 aa16.71■□□□□ 0.27
LINC01227-203ENST00000562002 PTGDRQ13258 359 aa16.7■□□□□ 0.26
LINC01227-203ENST00000562002 NUDT18Q6ZVK8 323 aa16.67■□□□□ 0.26
LINC01227-203ENST00000562002 LRCH3Q96II8 777 aa16.66■□□□□ 0.26
LINC01227-203ENST00000562002 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.66■□□□□ 0.26
LINC01227-203ENST00000562002 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
LINC01227-203ENST00000562002 WBP1LQ9NX94 342 aa16.62■□□□□ 0.25
LINC01227-203ENST00000562002 SMYD5Q6GMV2 418 aa16.61■□□□□ 0.25
LINC01227-203ENST00000562002 SAMD7Q7Z3H4 446 aa16.61■□□□□ 0.25
LINC01227-203ENST00000562002 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
LINC01227-203ENST00000562002 NYAP1Q6ZVC0 841 aa16.6■□□□□ 0.25
LINC01227-203ENST00000562002 TSR3Q9UJK0 312 aaKnown RBP16.6■□□□□ 0.25
LINC01227-203ENST00000562002 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
LINC01227-203ENST00000562002 FCHSD2O94868 740 aa16.57■□□□□ 0.24
LINC01227-203ENST00000562002 EYA1Q99502 592 aa16.56■□□□□ 0.24
LINC01227-203ENST00000562002 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
LINC01227-203ENST00000562002 ADGRG1Q9Y653 693 aa16.51■□□□□ 0.23
LINC01227-203ENST00000562002 GPR37O15354 613 aa16.5■□□□□ 0.23
LINC01227-203ENST00000562002 PPP4CP60510 307 aa16.5■□□□□ 0.23
LINC01227-203ENST00000562002 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
LINC01227-203ENST00000562002 HIC1Q14526 733 aa16.49■□□□□ 0.23
LINC01227-203ENST00000562002 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
LINC01227-203ENST00000562002 SWT1Q5T5J6 900 aaKnown RBP16.48■□□□□ 0.23
LINC01227-203ENST00000562002 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
LINC01227-203ENST00000562002 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
LINC01227-203ENST00000562002 RNF40O75150 1001 aa16.44■□□□□ 0.22
LINC01227-203ENST00000562002 DNAJB2P25686 324 aa16.42■□□□□ 0.22
LINC01227-203ENST00000562002 GNPATO15228 680 aa16.41■□□□□ 0.22
LINC01227-203ENST00000562002 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
LINC01227-203ENST00000562002 FECHP22830 423 aa16.4■□□□□ 0.22
LINC01227-203ENST00000562002 GPIHBP1Q8IV16 184 aa16.39■□□□□ 0.21
LINC01227-203ENST00000562002 TMEM134Q9H6X4 195 aa16.39■□□□□ 0.21
LINC01227-203ENST00000562002 RCCD1A6NED2 376 aa16.38■□□□□ 0.21
LINC01227-203ENST00000562002 PXYLP1Q8TE99 480 aa16.37■□□□□ 0.21
LINC01227-203ENST00000562002 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
LINC01227-203ENST00000562002 A0A0G2JS52 829 aa16.36■□□□□ 0.21
LINC01227-203ENST00000562002 OATP04181 439 aa16.35■□□□□ 0.21
LINC01227-203ENST00000562002 APLP1P51693 650 aa16.35■□□□□ 0.21
LINC01227-203ENST00000562002 KCNC4Q03721 635 aa16.35■□□□□ 0.21
LINC01227-203ENST00000562002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms