RNA–Protein interactions for RNA: ENST00000562002.5

LINC01227-203, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 2

Gene LINC01227, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-203ENST00000562002 AEBP2Q6ZN18 517 aaPredicted RBP40.84■■■■■ 4.13
LINC01227-203ENST00000562002 CHIC1Q5VXU3 224 aa39.31■■■■□ 3.88
LINC01227-203ENST00000562002 SENP3Q9H4L4 574 aaPredicted RBP34.72■■■■□ 3.15
LINC01227-203ENST00000562002 PHF23Q9BUL5 403 aaPredicted RBP34.52■■■■□ 3.12
LINC01227-203ENST00000562002 FOXD1Q16676 465 aa32.3■■■□□ 2.76
LINC01227-203ENST00000562002 PLPPR3Q6T4P5 718 aa31.65■■■□□ 2.66
LINC01227-203ENST00000562002 PPP6R1Q9UPN7 881 aa30.64■■■□□ 2.5
LINC01227-203ENST00000562002 ADRA2BP18089 450 aa30.55■■■□□ 2.48
LINC01227-203ENST00000562002 PIAS4Q8N2W9 510 aaPredicted RBP30.3■■■□□ 2.44
LINC01227-203ENST00000562002 MSH5O43196 834 aa30■■■□□ 2.39
LINC01227-203ENST00000562002 POTEDQ86YR6 584 aa28.34■■■□□ 2.13
LINC01227-203ENST00000562002 SCAF1Q9H7N4 1312 aaKnown RBP27.92■■■□□ 2.06
LINC01227-203ENST00000562002 MAPK8IP2Q13387 824 aaPredicted RBP27.89■■■□□ 2.06
LINC01227-203ENST00000562002 PPP4R3CPQ6ZMV5 832 aa27.81■■■□□ 2.04
LINC01227-203ENST00000562002 DMRT2Q9Y5R5 561 aa27.64■■■□□ 2.02
LINC01227-203ENST00000562002 CNKSR2Q8WXI2 1034 aa27.16■■□□□ 1.94
LINC01227-203ENST00000562002 NCBP3Q53F19 620 aaKnown RBP26.89■■□□□ 1.9
LINC01227-203ENST00000562002 HOXD11P31277 338 aaPredicted RBP26.85■■□□□ 1.89
LINC01227-203ENST00000562002 RNF216Q9NWF9 866 aaPredicted RBP26.78■■□□□ 1.88
LINC01227-203ENST00000562002 NPM3O75607 178 aaKnown RBP26.54■■□□□ 1.84
LINC01227-203ENST00000562002 KCNA4P22459 653 aa26.53■■□□□ 1.84
LINC01227-203ENST00000562002 DCAF8L1A6NGE4 600 aa26.4■■□□□ 1.82
LINC01227-203ENST00000562002 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
LINC01227-203ENST00000562002 RNF39Q9H2S5 420 aa25.67■■□□□ 1.7
LINC01227-203ENST00000562002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
LINC01227-203ENST00000562002 CACNB1Q02641 598 aaPredicted RBP25.37■■□□□ 1.65
LINC01227-203ENST00000562002 C1QBPQ07021 282 aaKnown RBP25.31■■□□□ 1.64
LINC01227-203ENST00000562002 SLC4A2P04920 1241 aa25.22■■□□□ 1.63
LINC01227-203ENST00000562002 SLC4A1APQ9BWU0 796 aaKnown RBP25.13■■□□□ 1.61
LINC01227-203ENST00000562002 U3KPZ7 1027 aaPredicted RBP25.11■■□□□ 1.61
LINC01227-203ENST00000562002 FOXD4L1Q9NU39 408 aa24.58■■□□□ 1.53
LINC01227-203ENST00000562002 SPINK5Q9NQ38 1064 aaPredicted RBP24.56■■□□□ 1.52
LINC01227-203ENST00000562002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
LINC01227-203ENST00000562002 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
LINC01227-203ENST00000562002 MYCNP04198 464 aaPredicted RBP24.53■■□□□ 1.52
LINC01227-203ENST00000562002 CAPN15O75808 1086 aa24.46■■□□□ 1.51
LINC01227-203ENST00000562002 SAMD1Q6SPF0 538 aaPredicted RBP24.44■■□□□ 1.5
LINC01227-203ENST00000562002 ZBTB22O15209 634 aa24.42■■□□□ 1.5
LINC01227-203ENST00000562002 APLP2Q06481 763 aa24.42■■□□□ 1.5
LINC01227-203ENST00000562002 DSG3P32926 999 aa24.22■■□□□ 1.47
LINC01227-203ENST00000562002 ZNF219Q9P2Y4 722 aaPredicted RBP24.2■■□□□ 1.46
LINC01227-203ENST00000562002 TRHP20396 242 aaPredicted RBP24.19■■□□□ 1.46
LINC01227-203ENST00000562002 ABCB7O75027 752 aa23.95■■□□□ 1.42
LINC01227-203ENST00000562002 ATF5Q9Y2D1 282 aaPredicted RBP23.93■■□□□ 1.42
LINC01227-203ENST00000562002 CSRNP3Q8WYN3 585 aa23.8■■□□□ 1.4
LINC01227-203ENST00000562002 ATXN8OSP0DMR3 200 aa23.77■■□□□ 1.4
LINC01227-203ENST00000562002 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
LINC01227-203ENST00000562002 POLA2Q14181 598 aa23.69■■□□□ 1.38
LINC01227-203ENST00000562002 ZBTB12Q9Y330 459 aaPredicted RBP23.26■■□□□ 1.31
LINC01227-203ENST00000562002 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
LINC01227-203ENST00000562002 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
LINC01227-203ENST00000562002 FBLN2P98095 1184 aa22.91■■□□□ 1.26
LINC01227-203ENST00000562002 MKRN4PQ13434 485 aaPredicted RBP22.87■■□□□ 1.25
LINC01227-203ENST00000562002 AKT1S1Q96B36 256 aa22.68■■□□□ 1.22
LINC01227-203ENST00000562002 SPDYE2BA6NHP3 402 aa22.6■■□□□ 1.21
LINC01227-203ENST00000562002 SPDYE6P0CI01 402 aa22.6■■□□□ 1.21
LINC01227-203ENST00000562002 SPDYE2Q495Y8 402 aa22.6■■□□□ 1.21
LINC01227-203ENST00000562002 REM2Q8IYK8 340 aaPredicted RBP22.46■■□□□ 1.19
LINC01227-203ENST00000562002 ZNF692Q9BU19 519 aaPredicted RBP22.4■■□□□ 1.18
LINC01227-203ENST00000562002 SSUH2Q9Y2M2 353 aa22.39■■□□□ 1.17
LINC01227-203ENST00000562002 CHRDL2Q6WN34 429 aa22.36■■□□□ 1.17
LINC01227-203ENST00000562002 POTEHQ6S545 545 aa22.31■■□□□ 1.16
LINC01227-203ENST00000562002 PITPNM1O00562 1244 aa22.23■■□□□ 1.15
LINC01227-203ENST00000562002 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
LINC01227-203ENST00000562002 SPDYE1Q8NFV5 336 aaPredicted RBP22.06■■□□□ 1.12
LINC01227-203ENST00000562002 SPDYE4A6NLX3 237 aa22.04■■□□□ 1.12
LINC01227-203ENST00000562002 PIP4P2Q8N4L2 257 aa21.96■■□□□ 1.11
LINC01227-203ENST00000562002 CLEC11AQ9Y240 323 aa21.96■■□□□ 1.11
LINC01227-203ENST00000562002 FXR2P51116 673 aaKnown RBP eCLIP21.93■■□□□ 1.1
LINC01227-203ENST00000562002 PRR29P0C7W0 189 aa21.69■■□□□ 1.06
LINC01227-203ENST00000562002 PROM2Q8N271 834 aa21.66■■□□□ 1.06
LINC01227-203ENST00000562002 PRKAR2AP13861 404 aaKnown RBP21.64■■□□□ 1.05
LINC01227-203ENST00000562002 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
LINC01227-203ENST00000562002 FKBP8Q14318 412 aa21.52■■□□□ 1.04
LINC01227-203ENST00000562002 CHADLQ6NUI6 762 aa21.52■■□□□ 1.04
LINC01227-203ENST00000562002 HAX1O00165 279 aa21.36■■□□□ 1.01
LINC01227-203ENST00000562002 CREBZFQ9NS37 354 aa21.32■■□□□ 1
LINC01227-203ENST00000562002 FARP1Q9Y4F1 1045 aaPredicted RBP21.26■□□□□ 0.99
LINC01227-203ENST00000562002 C19orf67A6NJJ6 358 aa21.2■□□□□ 0.98
LINC01227-203ENST00000562002 EVX2Q03828 476 aa21.19■□□□□ 0.98
LINC01227-203ENST00000562002 SP7Q8TDD2 431 aaPredicted RBP21.18■□□□□ 0.98
LINC01227-203ENST00000562002 MNX1P50219 401 aaPredicted RBP21.06■□□□□ 0.96
LINC01227-203ENST00000562002 CD44P16070 742 aaKnown RBP20.99■□□□□ 0.95
LINC01227-203ENST00000562002 MIER1Q8N108 512 aa20.93■□□□□ 0.94
LINC01227-203ENST00000562002 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
LINC01227-203ENST00000562002 FBXO3Q9UK99 471 aa20.9■□□□□ 0.94
LINC01227-203ENST00000562002 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
LINC01227-203ENST00000562002 PLCD3Q8N3E9 789 aa20.83■□□□□ 0.93
LINC01227-203ENST00000562002 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
LINC01227-203ENST00000562002 GABBR2O75899 941 aa20.73■□□□□ 0.91
LINC01227-203ENST00000562002 ZNF579Q8NAF0 562 aaKnown RBP20.71■□□□□ 0.91
LINC01227-203ENST00000562002 PAK3O75914 559 aaPredicted RBP20.7■□□□□ 0.9
LINC01227-203ENST00000562002 ZBTB47Q9UFB7 747 aaPredicted RBP20.66■□□□□ 0.9
LINC01227-203ENST00000562002 VASPP50552 380 aaPredicted RBP20.65■□□□□ 0.9
LINC01227-203ENST00000562002 CLCN6P51797 869 aa20.6■□□□□ 0.89
LINC01227-203ENST00000562002 RASEFQ8IZ41 740 aa20.55■□□□□ 0.88
LINC01227-203ENST00000562002 TSPYL2Q9H2G4 693 aaPredicted RBP20.55■□□□□ 0.88
LINC01227-203ENST00000562002 PHF12Q96QT6 1004 aa20.54■□□□□ 0.88
LINC01227-203ENST00000562002 NUBP1P53384 320 aa20.52■□□□□ 0.88
LINC01227-203ENST00000562002 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms