RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
SNX22-206ENST00000560997 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
SNX22-206ENST00000560997 SYCP2Q9BX26 1530 aa13.33□□□□□ -0.28
SNX22-206ENST00000560997 TTC37Q6PGP7 1564 aa13.33□□□□□ -0.28
SNX22-206ENST00000560997 CHD1O14646 1710 aa13.33□□□□□ -0.28
SNX22-206ENST00000560997 B4GALNT3Q6L9W6 998 aa13.32□□□□□ -0.28
SNX22-206ENST00000560997 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
SNX22-206ENST00000560997 ARHGAP5Q13017 1502 aa13.3□□□□□ -0.28
SNX22-206ENST00000560997 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
SNX22-206ENST00000560997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX22-206ENST00000560997 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
SNX22-206ENST00000560997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX22-206ENST00000560997 ERCC6L2Q5T890 1561 aa13.29□□□□□ -0.28
SNX22-206ENST00000560997 RGL3Q3MIN7 710 aa13.29□□□□□ -0.28
SNX22-206ENST00000560997 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
SNX22-206ENST00000560997 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
SNX22-206ENST00000560997 MSH5O43196 834 aa13.28□□□□□ -0.28
SNX22-206ENST00000560997 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
SNX22-206ENST00000560997 PRAG1Q86YV5 1406 aa13.28□□□□□ -0.28
SNX22-206ENST00000560997 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
SNX22-206ENST00000560997 E9PCH4 1651 aa13.27□□□□□ -0.28
SNX22-206ENST00000560997 TRPM1Q7Z4N2 1603 aa13.27□□□□□ -0.28
SNX22-206ENST00000560997 NUDCQ9Y266 331 aa13.27□□□□□ -0.28
SNX22-206ENST00000560997 UNC13BO14795 1591 aa13.27□□□□□ -0.29
SNX22-206ENST00000560997 NBPF1Q3BBV0 1214 aa13.26□□□□□ -0.29
SNX22-206ENST00000560997 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
SNX22-206ENST00000560997 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
SNX22-206ENST00000560997 PLEKHH2Q8IVE3 1493 aa13.25□□□□□ -0.29
SNX22-206ENST00000560997 A2MP01023 1474 aa13.25□□□□□ -0.29
SNX22-206ENST00000560997 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
SNX22-206ENST00000560997 ABCC2Q92887 1545 aa13.24□□□□□ -0.29
SNX22-206ENST00000560997 MYBBP1AQ9BQG0 1328 aaKnown RBP13.24□□□□□ -0.29
SNX22-206ENST00000560997 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
SNX22-206ENST00000560997 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
SNX22-206ENST00000560997 IQGAP3Q86VI3 1631 aa13.22□□□□□ -0.29
SNX22-206ENST00000560997 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
SNX22-206ENST00000560997 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
SNX22-206ENST00000560997 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
SNX22-206ENST00000560997 RALBP1Q15311 655 aa13.21□□□□□ -0.29
SNX22-206ENST00000560997 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
SNX22-206ENST00000560997 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
SNX22-206ENST00000560997 DISP3Q9P2K9 1392 aa13.19□□□□□ -0.3
SNX22-206ENST00000560997 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
SNX22-206ENST00000560997 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
SNX22-206ENST00000560997 PARD3Q8TEW0 1356 aa13.18□□□□□ -0.3
SNX22-206ENST00000560997 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
SNX22-206ENST00000560997 TESK2Q96S53 571 aa13.18□□□□□ -0.3
SNX22-206ENST00000560997 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
SNX22-206ENST00000560997 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
SNX22-206ENST00000560997 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SNX22-206ENST00000560997 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
SNX22-206ENST00000560997 LAMC1P11047 1609 aa13.16□□□□□ -0.3
SNX22-206ENST00000560997 PLCH2O75038 1416 aa13.16□□□□□ -0.3
SNX22-206ENST00000560997 ERBINQ96RT1 1412 aa13.16□□□□□ -0.3
SNX22-206ENST00000560997 TRAPPC8Q9Y2L5 1435 aa13.16□□□□□ -0.3
SNX22-206ENST00000560997 NLRP13Q86W25 1043 aa13.16□□□□□ -0.3
SNX22-206ENST00000560997 ATP10AO60312 1499 aa13.15□□□□□ -0.3
SNX22-206ENST00000560997 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
SNX22-206ENST00000560997 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
SNX22-206ENST00000560997 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
SNX22-206ENST00000560997 ABCC1P33527 1531 aa13.14□□□□□ -0.31
SNX22-206ENST00000560997 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
SNX22-206ENST00000560997 PANK3Q9H999 370 aa13.13□□□□□ -0.31
SNX22-206ENST00000560997 RNF17Q9BXT8 1623 aaKnown RBP13.11□□□□□ -0.31
SNX22-206ENST00000560997 TMF1P82094 1093 aa13.1□□□□□ -0.31
SNX22-206ENST00000560997 AFAP1Q8N556 730 aa13.1□□□□□ -0.31
SNX22-206ENST00000560997 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
SNX22-206ENST00000560997 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
SNX22-206ENST00000560997 UHRF1BP1LA0JNW5 1464 aa13.09□□□□□ -0.31
SNX22-206ENST00000560997 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
SNX22-206ENST00000560997 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
SNX22-206ENST00000560997 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
SNX22-206ENST00000560997 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
SNX22-206ENST00000560997 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
SNX22-206ENST00000560997 ZFYVE16Q7Z3T8 1539 aa13.07□□□□□ -0.32
SNX22-206ENST00000560997 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
SNX22-206ENST00000560997 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
SNX22-206ENST00000560997 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
SNX22-206ENST00000560997 TRPM2O94759 1503 aa13.05□□□□□ -0.32
SNX22-206ENST00000560997 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
SNX22-206ENST00000560997 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
SNX22-206ENST00000560997 CLTCL1P53675 1640 aa13.05□□□□□ -0.32
SNX22-206ENST00000560997 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
SNX22-206ENST00000560997 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
SNX22-206ENST00000560997 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
SNX22-206ENST00000560997 CEP152O94986 1710 aa13.04□□□□□ -0.32
SNX22-206ENST00000560997 RTEL1-TNFRSF6BF6WH68 1400 aa13.04□□□□□ -0.32
SNX22-206ENST00000560997 DEPDC5O75140 1603 aa13.02□□□□□ -0.32
SNX22-206ENST00000560997 PTPRTO14522 1441 aa13.02□□□□□ -0.32
SNX22-206ENST00000560997 PLIN1O60240 522 aa13.01□□□□□ -0.33
SNX22-206ENST00000560997 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
SNX22-206ENST00000560997 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
SNX22-206ENST00000560997 TET3O43151 1660 aa13.01□□□□□ -0.33
SNX22-206ENST00000560997 ATP7AQ04656 1500 aa13□□□□□ -0.33
SNX22-206ENST00000560997 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
SNX22-206ENST00000560997 KNSTRNQ9Y448 316 aa13□□□□□ -0.33
SNX22-206ENST00000560997 INSRP06213 1382 aa13□□□□□ -0.33
SNX22-206ENST00000560997 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
SNX22-206ENST00000560997 FANCAO15360 1455 aa13□□□□□ -0.33
SNX22-206ENST00000560997 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms