RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
TSPAN3-209ENST00000560715 GPR37O15354 613 aa9.29□□□□□ -0.92
TSPAN3-209ENST00000560715 SKIV2LQ15477 1246 aaKnown RBP9.29□□□□□ -0.92
TSPAN3-209ENST00000560715 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
TSPAN3-209ENST00000560715 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
TSPAN3-209ENST00000560715 CAPN15O75808 1086 aa9.28□□□□□ -0.92
TSPAN3-209ENST00000560715 CCDC136Q96JN2 1154 aa9.28□□□□□ -0.92
TSPAN3-209ENST00000560715 MRRFQ96E11 262 aaKnown RBP9.27□□□□□ -0.92
TSPAN3-209ENST00000560715 SNRKQ9NRH2 765 aa9.27□□□□□ -0.92
TSPAN3-209ENST00000560715 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.92
TSPAN3-209ENST00000560715 A0A0U1RQG5 324 aaPredicted RBP9.27□□□□□ -0.93
TSPAN3-209ENST00000560715 PCMTD1Q96MG8 357 aaPredicted RBP9.27□□□□□ -0.93
TSPAN3-209ENST00000560715 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
TSPAN3-209ENST00000560715 IGSF5Q9NSI5 407 aa9.26□□□□□ -0.93
TSPAN3-209ENST00000560715 SYNJ1O43426 1573 aa9.26□□□□□ -0.93
TSPAN3-209ENST00000560715 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
TSPAN3-209ENST00000560715 POLR3EQ9NVU0 708 aa9.25□□□□□ -0.93
TSPAN3-209ENST00000560715 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
TSPAN3-209ENST00000560715 SOGA1O94964 1423 aa9.25□□□□□ -0.93
TSPAN3-209ENST00000560715 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
TSPAN3-209ENST00000560715 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
TSPAN3-209ENST00000560715 SND1Q7KZF4 910 aaKnown RBP eCLIP9.23□□□□□ -0.932e-6■■■■□ 24.8
TSPAN3-209ENST00000560715 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
TSPAN3-209ENST00000560715 BIVM-ERCC5R4GMW8 1640 aa9.22□□□□□ -0.93
TSPAN3-209ENST00000560715 GLMNQ92990 594 aa9.22□□□□□ -0.93
TSPAN3-209ENST00000560715 BRD1O95696 1058 aa9.22□□□□□ -0.93
TSPAN3-209ENST00000560715 FBXO31Q5XUX0 539 aaPredicted RBP9.22□□□□□ -0.93
TSPAN3-209ENST00000560715 ZNF662Q6ZS27 426 aa9.22□□□□□ -0.93
TSPAN3-209ENST00000560715 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.93
TSPAN3-209ENST00000560715 CFTRP13569 1480 aa9.21□□□□□ -0.94
TSPAN3-209ENST00000560715 PKNOX2Q96KN3 472 aa9.21□□□□□ -0.94
TSPAN3-209ENST00000560715 PSMD1Q99460 953 aa9.21□□□□□ -0.94
TSPAN3-209ENST00000560715 RUSC2Q8N2Y8 1516 aa9.2□□□□□ -0.94
TSPAN3-209ENST00000560715 IRF6O14896 467 aa9.2□□□□□ -0.94
TSPAN3-209ENST00000560715 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.19□□□□□ -0.94
TSPAN3-209ENST00000560715 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
TSPAN3-209ENST00000560715 DPYSL4O14531 572 aa9.19□□□□□ -0.94
TSPAN3-209ENST00000560715 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
TSPAN3-209ENST00000560715 AMHR2Q16671 573 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 PCDHB13Q9Y5F0 798 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 FOSBP53539 338 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 TNIKQ9UKE5 1360 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 KIF21BO75037 1637 aa9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
TSPAN3-209ENST00000560715 PRDM16Q9HAZ2 1276 aa9.17□□□□□ -0.94
TSPAN3-209ENST00000560715 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
TSPAN3-209ENST00000560715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.94
TSPAN3-209ENST00000560715 PHF8Q9UPP1 1060 aa9.17□□□□□ -0.94
TSPAN3-209ENST00000560715 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
TSPAN3-209ENST00000560715 GOPCQ9HD26 462 aa9.16□□□□□ -0.94
TSPAN3-209ENST00000560715 KCNA1Q09470 495 aa9.16□□□□□ -0.94
TSPAN3-209ENST00000560715 ABL2P42684 1182 aa9.15□□□□□ -0.94
TSPAN3-209ENST00000560715 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
TSPAN3-209ENST00000560715 CADPSQ9ULU8 1353 aa9.15□□□□□ -0.94
TSPAN3-209ENST00000560715 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
TSPAN3-209ENST00000560715 GIMAP6Q6P9H5 292 aa9.15□□□□□ -0.94
TSPAN3-209ENST00000560715 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
TSPAN3-209ENST00000560715 TXNDC2Q86VQ3 553 aa9.14□□□□□ -0.95
TSPAN3-209ENST00000560715 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
TSPAN3-209ENST00000560715 NLRP7Q8WX94 980 aa9.14□□□□□ -0.95
TSPAN3-209ENST00000560715 NEFLP07196 543 aa9.14□□□□□ -0.95
TSPAN3-209ENST00000560715 CUX1P39880 1505 aa9.14□□□□□ -0.95
TSPAN3-209ENST00000560715 CEP162Q5TB80 1403 aa9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 PPP1R15AO75807 674 aaPredicted RBP9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 ANKRD62A6NC57 917 aa9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 GRXCR2A6NFK2 248 aa9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 SPDYE2BA6NHP3 402 aa9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 SPDYE6P0CI01 402 aa9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 SPDYE2Q495Y8 402 aa9.13□□□□□ -0.95
TSPAN3-209ENST00000560715 ZNF467Q7Z7K2 595 aaPredicted RBP9.12□□□□□ -0.95
TSPAN3-209ENST00000560715 ITGAEP38570 1179 aa9.11□□□□□ -0.95
TSPAN3-209ENST00000560715 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
TSPAN3-209ENST00000560715 PBXIP1Q96AQ6 731 aa9.11□□□□□ -0.95
TSPAN3-209ENST00000560715 TCF3P15923 654 aa9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 NOM1Q5C9Z4 860 aaKnown RBP9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 EFCAB3Q8N7B9 438 aa9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 MARCH6O60337 910 aa9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 CSB-PGBD3P0DP91 1061 aa9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 FBXO22Q8NEZ5 403 aa9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 TBC1D2BQ9UPU7 963 aa9.1□□□□□ -0.95
TSPAN3-209ENST00000560715 RBM47A0AV96 593 aaKnown RBP9.09□□□□□ -0.95
TSPAN3-209ENST00000560715 TAGLNQ01995 201 aaKnown RBP9.09□□□□□ -0.95
TSPAN3-209ENST00000560715 ZNF16P17020 682 aaPredicted RBP9.09□□□□□ -0.95
TSPAN3-209ENST00000560715 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
TSPAN3-209ENST00000560715 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 SH3D19Q5HYK7 790 aa9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 TICAM2Q86XR7 235 aa9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 DRC1Q96MC2 740 aa9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 ERICH3Q5RHP9 1530 aa9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 MTMR14Q8NCE2 650 aa9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 EMILIN3Q9NT22 766 aa9.07□□□□□ -0.96
TSPAN3-209ENST00000560715 CFAP70Q5T0N1 1121 aa9.06□□□□□ -0.96
TSPAN3-209ENST00000560715 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
TSPAN3-209ENST00000560715 SREK1Q8WXA9 508 aaKnown RBP9.06□□□□□ -0.96
TSPAN3-209ENST00000560715 ZBTB12Q9Y330 459 aaPredicted RBP9.06□□□□□ -0.96
TSPAN3-209ENST00000560715 SPDYE5A6NIY4 337 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms