RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
CCDC33-209ENST00000560565 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
CCDC33-209ENST00000560565 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
CCDC33-209ENST00000560565 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
CCDC33-209ENST00000560565 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
CCDC33-209ENST00000560565 TSPY4P0CV99 314 aa12.09□□□□□ -0.47
CCDC33-209ENST00000560565 TSPY10P0CW01 314 aa12.09□□□□□ -0.47
CCDC33-209ENST00000560565 ESF1Q9H501 851 aaKnown RBP12.09□□□□□ -0.47
CCDC33-209ENST00000560565 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
CCDC33-209ENST00000560565 AGLP35573 1532 aa12.09□□□□□ -0.47
CCDC33-209ENST00000560565 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
CCDC33-209ENST00000560565 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
CCDC33-209ENST00000560565 ANP32EQ9BTT0 268 aa12.08□□□□□ -0.48
CCDC33-209ENST00000560565 RTEL1-TNFRSF6BF6WH68 1400 aa12.08□□□□□ -0.48
CCDC33-209ENST00000560565 DAPK1P53355 1430 aa12.08□□□□□ -0.48
CCDC33-209ENST00000560565 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
CCDC33-209ENST00000560565 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.48
CCDC33-209ENST00000560565 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
CCDC33-209ENST00000560565 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
CCDC33-209ENST00000560565 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
CCDC33-209ENST00000560565 A2MP01023 1474 aa12.07□□□□□ -0.48
CCDC33-209ENST00000560565 NEFLP07196 543 aa12.06□□□□□ -0.48
CCDC33-209ENST00000560565 IQSEC2Q5JU85 1478 aa12.06□□□□□ -0.48
CCDC33-209ENST00000560565 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
CCDC33-209ENST00000560565 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
CCDC33-209ENST00000560565 ABCC5O15440 1437 aa12.04□□□□□ -0.48
CCDC33-209ENST00000560565 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
CCDC33-209ENST00000560565 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
CCDC33-209ENST00000560565 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
CCDC33-209ENST00000560565 ITGAEP38570 1179 aa12.03□□□□□ -0.48
CCDC33-209ENST00000560565 GGT6Q6P531 493 aa12.03□□□□□ -0.48
CCDC33-209ENST00000560565 PLXNC1O60486 1568 aa12.03□□□□□ -0.48
CCDC33-209ENST00000560565 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
CCDC33-209ENST00000560565 LTBP4Q8N2S1 1624 aa12.02□□□□□ -0.49
CCDC33-209ENST00000560565 RAB3GAP2Q9H2M9 1393 aa12.02□□□□□ -0.49
CCDC33-209ENST00000560565 NAIPQ13075 1403 aa12.02□□□□□ -0.49
CCDC33-209ENST00000560565 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
CCDC33-209ENST00000560565 KIF3BO15066 747 aa12□□□□□ -0.49
CCDC33-209ENST00000560565 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
CCDC33-209ENST00000560565 C3P01024 1663 aa11.99□□□□□ -0.49
CCDC33-209ENST00000560565 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
CCDC33-209ENST00000560565 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
CCDC33-209ENST00000560565 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
CCDC33-209ENST00000560565 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
CCDC33-209ENST00000560565 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
CCDC33-209ENST00000560565 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
CCDC33-209ENST00000560565 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
CCDC33-209ENST00000560565 HSPA1LP34931 641 aa11.96□□□□□ -0.49
CCDC33-209ENST00000560565 STRCQ7RTU9 1775 aa11.96□□□□□ -0.49
CCDC33-209ENST00000560565 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
CCDC33-209ENST00000560565 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
CCDC33-209ENST00000560565 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
CCDC33-209ENST00000560565 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
CCDC33-209ENST00000560565 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
CCDC33-209ENST00000560565 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
CCDC33-209ENST00000560565 RGS17Q9UGC6 210 aaPredicted RBP11.94□□□□□ -0.5
CCDC33-209ENST00000560565 CHIC2Q9UKJ5 165 aa11.94□□□□□ -0.5
CCDC33-209ENST00000560565 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
CCDC33-209ENST00000560565 PTPRTO14522 1441 aa11.93□□□□□ -0.5
CCDC33-209ENST00000560565 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
CCDC33-209ENST00000560565 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
CCDC33-209ENST00000560565 NPATQ14207 1427 aa11.92□□□□□ -0.5
CCDC33-209ENST00000560565 EIF2AK4Q9P2K8 1649 aaKnown RBP11.9□□□□□ -0.5
CCDC33-209ENST00000560565 KDM5DQ9BY66 1539 aa11.9□□□□□ -0.5
CCDC33-209ENST00000560565 FAM135AQ9P2D6 1515 aa11.9□□□□□ -0.5
CCDC33-209ENST00000560565 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
CCDC33-209ENST00000560565 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
CCDC33-209ENST00000560565 UNC13BO14795 1591 aa11.88□□□□□ -0.51
CCDC33-209ENST00000560565 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
CCDC33-209ENST00000560565 ANP32CO43423 234 aa11.88□□□□□ -0.51
CCDC33-209ENST00000560565 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
CCDC33-209ENST00000560565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC33-209ENST00000560565 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
CCDC33-209ENST00000560565 ZC3H13Q5T200 1668 aaKnown RBP11.85□□□□□ -0.51
CCDC33-209ENST00000560565 PZPP20742 1482 aa11.85□□□□□ -0.51
CCDC33-209ENST00000560565 DEPDC5O75140 1603 aa11.85□□□□□ -0.51
CCDC33-209ENST00000560565 ABCC3O15438 1527 aa11.85□□□□□ -0.51
CCDC33-209ENST00000560565 KANK1Q14678 1352 aa11.84□□□□□ -0.51
CCDC33-209ENST00000560565 IQGAP3Q86VI3 1631 aa11.84□□□□□ -0.51
CCDC33-209ENST00000560565 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
CCDC33-209ENST00000560565 SETD1AO15047 1707 aaKnown RBP11.83□□□□□ -0.52
CCDC33-209ENST00000560565 CEP152O94986 1710 aa11.83□□□□□ -0.52
CCDC33-209ENST00000560565 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
CCDC33-209ENST00000560565 TNRQ92752 1358 aa11.83□□□□□ -0.52
CCDC33-209ENST00000560565 CEP170BQ9Y4F5 1589 aaPredicted RBP11.82□□□□□ -0.52
CCDC33-209ENST00000560565 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
CCDC33-209ENST00000560565 PRDM15P57071 1507 aaPredicted RBP11.81□□□□□ -0.52
CCDC33-209ENST00000560565 CAMSAP1Q5T5Y3 1602 aa11.81□□□□□ -0.52
CCDC33-209ENST00000560565 A2ML1A8K2U0 1454 aa11.81□□□□□ -0.52
CCDC33-209ENST00000560565 FKBP8Q14318 412 aa11.8□□□□□ -0.52
CCDC33-209ENST00000560565 ERICH6Q7L0X2 663 aa11.8□□□□□ -0.52
CCDC33-209ENST00000560565 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
CCDC33-209ENST00000560565 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
CCDC33-209ENST00000560565 THEMISQ8N1K5 641 aaPredicted RBP11.79□□□□□ -0.52
CCDC33-209ENST00000560565 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
CCDC33-209ENST00000560565 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
CCDC33-209ENST00000560565 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
CCDC33-209ENST00000560565 NLRP1Q9C000 1473 aa11.78□□□□□ -0.52
CCDC33-209ENST00000560565 PKD2Q13563 968 aa11.78□□□□□ -0.52
CCDC33-209ENST00000560565 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms